nuclear receptor coactivator 1 isoform X5 [Mus musculus]
List of domain hits
Name | Accession | Description | Interval | E-value | |||
SRC-1 | pfam08832 | Steroid receptor coactivator; This domain is found in steroid/nuclear receptor coactivators ... |
253-332 | 1.56e-25 | |||
Steroid receptor coactivator; This domain is found in steroid/nuclear receptor coactivators and contains two LXXLL motifs that are involved in receptor binding. The family includes SRC-1/NcoA-1, NcoA-2/TIF2, pCIP/ACTR/GRIP-1/AIB1. : Pssm-ID: 462615 [Multi-domain] Cd Length: 87 Bit Score: 101.31 E-value: 1.56e-25
|
|||||||
NCOA_u2 super family | cl25027 | Unstructured region on nuclear receptor coactivator protein; NCOA_u2 is a region of natively ... |
89-211 | 4.08e-17 | |||
Unstructured region on nuclear receptor coactivator protein; NCOA_u2 is a region of natively unstructured but highly conserved sequence found on higher eukaryote nuclear receptor coactivator proteins. It lies between a PAS domain, pfam14598 and a steroid receptor coactivator domain, pfam08832. The function is not known. The actual alignment was detected with superfamily member pfam16665: Pssm-ID: 465223 [Multi-domain] Cd Length: 119 Bit Score: 78.24 E-value: 4.08e-17
|
|||||||
Nuc_rec_co-act | pfam08815 | Nuclear receptor coactivator; This region is found on eukaryotic nuclear receptor coactivators ... |
550-595 | 2.54e-16 | |||
Nuclear receptor coactivator; This region is found on eukaryotic nuclear receptor coactivators and forms an alpha helical structure. : Pssm-ID: 462608 [Multi-domain] Cd Length: 47 Bit Score: 73.59 E-value: 2.54e-16
|
|||||||
DUF1518 | pfam07469 | Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually ... |
775-831 | 1.87e-12 | |||
Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually found tandemly repeated in the nuclear receptor coactivator family (NCOA1/2/3, also known as the SRC/p160 nuclear receptor coactivator family, which are ligand-dependent transcription factors. : Pssm-ID: 462174 Cd Length: 58 Bit Score: 62.86 E-value: 1.87e-12
|
|||||||
DUF4927 super family | cl24752 | Domain of unknown function (DUF4927); This family, around 80 residues, consists of ... |
367-444 | 2.49e-08 | |||
Domain of unknown function (DUF4927); This family, around 80 residues, consists of uncharacterized and nuclear receptor coactivator 2 proteins and is mainly found in mammalia species. The specific function of this family is still unknown. The actual alignment was detected with superfamily member pfam16279: Pssm-ID: 465083 Cd Length: 87 Bit Score: 52.11 E-value: 2.49e-08
|
|||||||
DUF1518 | pfam07469 | Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually ... |
838-894 | 2.13e-07 | |||
Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually found tandemly repeated in the nuclear receptor coactivator family (NCOA1/2/3, also known as the SRC/p160 nuclear receptor coactivator family, which are ligand-dependent transcription factors. : Pssm-ID: 462174 Cd Length: 58 Bit Score: 48.61 E-value: 2.13e-07
|
|||||||
Name | Accession | Description | Interval | E-value | |||
SRC-1 | pfam08832 | Steroid receptor coactivator; This domain is found in steroid/nuclear receptor coactivators ... |
253-332 | 1.56e-25 | |||
Steroid receptor coactivator; This domain is found in steroid/nuclear receptor coactivators and contains two LXXLL motifs that are involved in receptor binding. The family includes SRC-1/NcoA-1, NcoA-2/TIF2, pCIP/ACTR/GRIP-1/AIB1. Pssm-ID: 462615 [Multi-domain] Cd Length: 87 Bit Score: 101.31 E-value: 1.56e-25
|
|||||||
NCOA_u2 | pfam16665 | Unstructured region on nuclear receptor coactivator protein; NCOA_u2 is a region of natively ... |
89-211 | 4.08e-17 | |||
Unstructured region on nuclear receptor coactivator protein; NCOA_u2 is a region of natively unstructured but highly conserved sequence found on higher eukaryote nuclear receptor coactivator proteins. It lies between a PAS domain, pfam14598 and a steroid receptor coactivator domain, pfam08832. The function is not known. Pssm-ID: 465223 [Multi-domain] Cd Length: 119 Bit Score: 78.24 E-value: 4.08e-17
|
|||||||
Nuc_rec_co-act | pfam08815 | Nuclear receptor coactivator; This region is found on eukaryotic nuclear receptor coactivators ... |
550-595 | 2.54e-16 | |||
Nuclear receptor coactivator; This region is found on eukaryotic nuclear receptor coactivators and forms an alpha helical structure. Pssm-ID: 462608 [Multi-domain] Cd Length: 47 Bit Score: 73.59 E-value: 2.54e-16
|
|||||||
DUF1518 | pfam07469 | Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually ... |
775-831 | 1.87e-12 | |||
Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually found tandemly repeated in the nuclear receptor coactivator family (NCOA1/2/3, also known as the SRC/p160 nuclear receptor coactivator family, which are ligand-dependent transcription factors. Pssm-ID: 462174 Cd Length: 58 Bit Score: 62.86 E-value: 1.87e-12
|
|||||||
DUF4927 | pfam16279 | Domain of unknown function (DUF4927); This family, around 80 residues, consists of ... |
367-444 | 2.49e-08 | |||
Domain of unknown function (DUF4927); This family, around 80 residues, consists of uncharacterized and nuclear receptor coactivator 2 proteins and is mainly found in mammalia species. The specific function of this family is still unknown. Pssm-ID: 465083 Cd Length: 87 Bit Score: 52.11 E-value: 2.49e-08
|
|||||||
DUF1518 | pfam07469 | Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually ... |
838-894 | 2.13e-07 | |||
Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually found tandemly repeated in the nuclear receptor coactivator family (NCOA1/2/3, also known as the SRC/p160 nuclear receptor coactivator family, which are ligand-dependent transcription factors. Pssm-ID: 462174 Cd Length: 58 Bit Score: 48.61 E-value: 2.13e-07
|
|||||||
Name | Accession | Description | Interval | E-value | |||
SRC-1 | pfam08832 | Steroid receptor coactivator; This domain is found in steroid/nuclear receptor coactivators ... |
253-332 | 1.56e-25 | |||
Steroid receptor coactivator; This domain is found in steroid/nuclear receptor coactivators and contains two LXXLL motifs that are involved in receptor binding. The family includes SRC-1/NcoA-1, NcoA-2/TIF2, pCIP/ACTR/GRIP-1/AIB1. Pssm-ID: 462615 [Multi-domain] Cd Length: 87 Bit Score: 101.31 E-value: 1.56e-25
|
|||||||
NCOA_u2 | pfam16665 | Unstructured region on nuclear receptor coactivator protein; NCOA_u2 is a region of natively ... |
89-211 | 4.08e-17 | |||
Unstructured region on nuclear receptor coactivator protein; NCOA_u2 is a region of natively unstructured but highly conserved sequence found on higher eukaryote nuclear receptor coactivator proteins. It lies between a PAS domain, pfam14598 and a steroid receptor coactivator domain, pfam08832. The function is not known. Pssm-ID: 465223 [Multi-domain] Cd Length: 119 Bit Score: 78.24 E-value: 4.08e-17
|
|||||||
Nuc_rec_co-act | pfam08815 | Nuclear receptor coactivator; This region is found on eukaryotic nuclear receptor coactivators ... |
550-595 | 2.54e-16 | |||
Nuclear receptor coactivator; This region is found on eukaryotic nuclear receptor coactivators and forms an alpha helical structure. Pssm-ID: 462608 [Multi-domain] Cd Length: 47 Bit Score: 73.59 E-value: 2.54e-16
|
|||||||
DUF1518 | pfam07469 | Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually ... |
775-831 | 1.87e-12 | |||
Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually found tandemly repeated in the nuclear receptor coactivator family (NCOA1/2/3, also known as the SRC/p160 nuclear receptor coactivator family, which are ligand-dependent transcription factors. Pssm-ID: 462174 Cd Length: 58 Bit Score: 62.86 E-value: 1.87e-12
|
|||||||
DUF4927 | pfam16279 | Domain of unknown function (DUF4927); This family, around 80 residues, consists of ... |
367-444 | 2.49e-08 | |||
Domain of unknown function (DUF4927); This family, around 80 residues, consists of uncharacterized and nuclear receptor coactivator 2 proteins and is mainly found in mammalia species. The specific function of this family is still unknown. Pssm-ID: 465083 Cd Length: 87 Bit Score: 52.11 E-value: 2.49e-08
|
|||||||
DUF1518 | pfam07469 | Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually ... |
838-894 | 2.13e-07 | |||
Nuclear receptor coactivator, DUF1518; This conserved domain of unknown function is usually found tandemly repeated in the nuclear receptor coactivator family (NCOA1/2/3, also known as the SRC/p160 nuclear receptor coactivator family, which are ligand-dependent transcription factors. Pssm-ID: 462174 Cd Length: 58 Bit Score: 48.61 E-value: 2.13e-07
|
|||||||
Blast search parameters | ||||
|