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Conserved domains on  [gi|1907091767|ref|XP_036013685|]
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uncharacterized protein LOC100041979 isoform X2 [Mus musculus]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11472214)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
98-526 2.99e-13

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 72.04  E-value: 2.99e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767  98 QKPYECNQCGKGFVMPSCLKRHERFHTGEKPYKCNQ--CDKAFSQYNNLQTHRRTHTGEKPYKCN-QCDKAFSQHSTLQT 174
Cdd:COG5048    31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSkSLPLSNSKASSSSL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 175 HRRTHTGEKPFKCNQCDKAFSEKCSLQTHRRTHT---GEKPYKCNQCDKAFSQYSHLHIHRRTHtgekplkcNECDETFS 251
Cdd:COG5048   111 SSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISnlrNNPLPGNNSSSVNTPQSNSLHPPLPAN--------SLSKDPSS 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 252 NHSNLQTHRRIHTGEKPYKCNQCDKAFSQHSTLQNHRRTHTgEKPFKCNQCDKAFSRHSTLQthrrthtgekpfkcnqcd 331
Cdd:COG5048   183 NLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSLLSQ------------------ 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 332 kafsQYSHLHIHRRTHTGEKPFKCNQCNKAFSQYSHLHIHRRTHTG-EKPYKCNQCDKTFSNHSTLQTHRRT--HTGE-- 406
Cdd:COG5048   244 ----SPSSLSSSDSSSSASESPRSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSvnHSGEsl 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 407 KPYKC--NQCDKAFSRHSTLQTHRRTHTGEKPFKC--NQCDKAFSQK------CSLQKHIRIHTGEKLYKC-NECDKAFS 475
Cdd:COG5048   320 KPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLlnneppQSLQQYKDLKNDKKSETLsNSCIRNFK 399

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1907091767 476 QHSTLQTHRRTHTGEKP--FKFNECDEGFSHHYNLQIHERRHTREKPYKCIQC 526
Cdd:COG5048   400 RDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSIL 452
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
98-526 2.99e-13

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 72.04  E-value: 2.99e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767  98 QKPYECNQCGKGFVMPSCLKRHERFHTGEKPYKCNQ--CDKAFSQYNNLQTHRRTHTGEKPYKCN-QCDKAFSQHSTLQT 174
Cdd:COG5048    31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSkSLPLSNSKASSSSL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 175 HRRTHTGEKPFKCNQCDKAFSEKCSLQTHRRTHT---GEKPYKCNQCDKAFSQYSHLHIHRRTHtgekplkcNECDETFS 251
Cdd:COG5048   111 SSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISnlrNNPLPGNNSSSVNTPQSNSLHPPLPAN--------SLSKDPSS 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 252 NHSNLQTHRRIHTGEKPYKCNQCDKAFSQHSTLQNHRRTHTgEKPFKCNQCDKAFSRHSTLQthrrthtgekpfkcnqcd 331
Cdd:COG5048   183 NLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSLLSQ------------------ 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 332 kafsQYSHLHIHRRTHTGEKPFKCNQCNKAFSQYSHLHIHRRTHTG-EKPYKCNQCDKTFSNHSTLQTHRRT--HTGE-- 406
Cdd:COG5048   244 ----SPSSLSSSDSSSSASESPRSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSvnHSGEsl 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 407 KPYKC--NQCDKAFSRHSTLQTHRRTHTGEKPFKC--NQCDKAFSQK------CSLQKHIRIHTGEKLYKC-NECDKAFS 475
Cdd:COG5048   320 KPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLlnneppQSLQQYKDLKNDKKSETLsNSCIRNFK 399

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1907091767 476 QHSTLQTHRRTHTGEKP--FKFNECDEGFSHHYNLQIHERRHTREKPYKCIQC 526
Cdd:COG5048   400 RDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSIL 452
zf-H2C2_2 pfam13465
Zinc-finger double domain;
116-140 9.61e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.61e-04
                          10        20
                  ....*....|....*....|....*
gi 1907091767 116 LKRHERFHTGEKPYKCNQCDKAFSQ 140
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
98-526 2.99e-13

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 72.04  E-value: 2.99e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767  98 QKPYECNQCGKGFVMPSCLKRHERFHTGEKPYKCNQ--CDKAFSQYNNLQTHRRTHTGEKPYKCN-QCDKAFSQHSTLQT 174
Cdd:COG5048    31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSkSLPLSNSKASSSSL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 175 HRRTHTGEKPFKCNQCDKAFSEKCSLQTHRRTHT---GEKPYKCNQCDKAFSQYSHLHIHRRTHtgekplkcNECDETFS 251
Cdd:COG5048   111 SSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISnlrNNPLPGNNSSSVNTPQSNSLHPPLPAN--------SLSKDPSS 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 252 NHSNLQTHRRIHTGEKPYKCNQCDKAFSQHSTLQNHRRTHTgEKPFKCNQCDKAFSRHSTLQthrrthtgekpfkcnqcd 331
Cdd:COG5048   183 NLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSLLSQ------------------ 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 332 kafsQYSHLHIHRRTHTGEKPFKCNQCNKAFSQYSHLHIHRRTHTG-EKPYKCNQCDKTFSNHSTLQTHRRT--HTGE-- 406
Cdd:COG5048   244 ----SPSSLSSSDSSSSASESPRSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSvnHSGEsl 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 407 KPYKC--NQCDKAFSRHSTLQTHRRTHTGEKPFKC--NQCDKAFSQK------CSLQKHIRIHTGEKLYKC-NECDKAFS 475
Cdd:COG5048   320 KPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLlnneppQSLQQYKDLKNDKKSETLsNSCIRNFK 399

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1907091767 476 QHSTLQTHRRTHTGEKP--FKFNECDEGFSHHYNLQIHERRHTREKPYKCIQC 526
Cdd:COG5048   400 RDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSIL 452
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
91-448 3.64e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 62.02  E-value: 3.64e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767  91 HKRTQTGQKPYECNQ--CGKGFVMPSCLKRHERFHTGEKPYKCNQCDKAFSQYNNLQTHRRTHTGE-KPYKCNQCDKAFS 167
Cdd:COG5048    52 HIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLSSSSSNSnDNNLLSSHSLPPS 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 168 QHSTLQTHRRTHTGEKPFKCNQC----------------------DKAFSEKCSLQTHRRTHTGEKPYKCNQCDKAFSQY 225
Cdd:COG5048   132 SRDPQLPDLLSISNLRNNPLPGNnsssvntpqsnslhpplpanslSKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSI 211

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 226 SHLHIHRRTHTGEKPLKCNECDETFSNHSNLQTHRRI------HTGEKPYKCNQCDKAFSQHSTLQNHRRTHTG-EKPFK 298
Cdd:COG5048   212 PSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLsssdssSSASESPRSSLPTASSQSSSPNESDSSSEKGfSLPIK 291

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 299 CNQCDKAFSRHSTLQTHRRT--HTGE--KPFKC--NQCDKAFSQYSHLHIHRRTHTGEKPFKC--NQCNKAFSQYSH--- 367
Cdd:COG5048   292 SKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLLNnep 371

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 368 --LHIHRRTHTGEKPYKC--NQCDKTFSNHSTLQTHRRTHTGEKP--YKCNQCDKAFSRHSTLQTHRRTHTGEKPFKCNQ 441
Cdd:COG5048   372 pqSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSI 451


                  ....*..
gi 1907091767 442 CDKAFSQ 448
Cdd:COG5048   452 LKSFRRD 458
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
58-336 1.69e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 50.46  E-value: 1.69e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767  58 SHAQRHERVHTEKIPSEVIHCVEDFLPyTSLQVHKRTQTGQKPYECNQcgkgfvmPSCLKRHERFHTGEKPYKCNQCDKA 137
Cdd:COG5048   198 SSSENSPLSSSYSIPSSSSDQNLENSS-SSLPLTTNSQLSPKSLLSQS-------PSSLSSSDSSSSASESPRSSLPTAS 269

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 138 FSQYNNLQTHRRTHTG-EKPYKCNQCDKAFSQHSTLQTHRRT--HTGE--KPFKC--NQCDKAFSEKCSLQTHRRTHTGE 210
Cdd:COG5048   270 SQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSI 349

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 211 KPYKCnqcdkafsqyshlhiHRRTHTGEKPLKCNECDETFSNHSNLQTHRRIHTGEKpykcNQCDKAFSQHSTLQNHRRT 290
Cdd:COG5048   350 SPAKE---------------KLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLS----NSCIRNFKRDSNLSLHIIT 410

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1907091767 291 HTGEKP--FKCNQCDKAFSRHSTLQTHRRTHTGEKPFKCNQCDKAFSQ 336
Cdd:COG5048   411 HLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRD 458
zf-H2C2_2 pfam13465
Zinc-finger double domain;
116-140 9.61e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.61e-04
                          10        20
                  ....*....|....*....|....*
gi 1907091767 116 LKRHERFHTGEKPYKCNQCDKAFSQ 140
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
143-168 1.25e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.25e-03
                          10        20
                  ....*....|....*....|....*.
gi 1907091767 143 NLQTHRRTHTGEKPYKCNQCDKAFSQ 168
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
255-280 1.41e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.41e-03
                          10        20
                  ....*....|....*....|....*.
gi 1907091767 255 NLQTHRRIHTGEKPYKCNQCDKAFSQ 280
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
199-224 2.54e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.54e-03
                          10        20
                  ....*....|....*....|....*.
gi 1907091767 199 SLQTHRRTHTGEKPYKCNQCDKAFSQ 224
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
396-420 3.38e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.38e-03
                          10        20
                  ....*....|....*....|....*
gi 1907091767 396 LQTHRRTHTGEKPYKCNQCDKAFSR 420
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
312-336 3.65e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.65e-03
                          10        20
                  ....*....|....*....|....*
gi 1907091767 312 LQTHRRTHTGEKPFKCNQCDKAFSQ 336
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
424-448 3.65e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.65e-03
                          10        20
                  ....*....|....*....|....*
gi 1907091767 424 LQTHRRTHTGEKPFKCNQCDKAFSQ 448
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 153-236 3.79e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 39.70  E-value: 3.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 153 GEKPYKCN--QCDKAFSQHSTLQTHRrthtgekpfKCNQCDKAFSEKCSLQTHRRTHTGEKPYKCNQCDKAFSQYSHLHI 230
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  ....*.
gi 1907091767 231 HRRTHT 236
Cdd:COG5189   417 HRKHSH 422
zf-H2C2_2 pfam13465
Zinc-finger double domain;
284-308 3.95e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.95e-03
                          10        20
                  ....*....|....*....|....*
gi 1907091767 284 LQNHRRTHTGEKPFKCNQCDKAFSR 308
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 350-432 3.96e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 39.70  E-value: 3.96e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907091767 350 EKPFKCNQCNKAFSQYSHLHIH---RRTHT-GEKPYKCN--QCDKTFSNHSTLQTHR-------RTH------------T 404
Cdd:COG5189   315 KLPCTNSSSNGKLAHGGERNIDtpsRMLKVkDGKPYKCPveGCNKKYKNQNGLKYHMlhghqnqKLHenpspekmnifsA 394

                          90       100
                  ....*....|....*....|....*...
gi 1907091767 405 GEKPYKCNQCDKAFSRHSTLQTHRRTHT 432
Cdd:COG5189   395 KDKPYRCEVCDKRYKNLNGLKYHRKHSH 422
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 349-404 5.10e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 39.32  E-value: 5.10e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907091767 349 GEKPFKCN--QCNKAFS-----QYSHLHIHRRTHTGE--------------KPYKCNQCDKTFSNHSTLQTHRRTHT 404
Cdd:COG5189   346 DGKPYKCPveGCNKKYKnqnglKYHMLHGHQNQKLHEnpspekmnifsakdKPYRCEVCDKRYKNLNGLKYHRKHSH 422
zf-H2C2_2 pfam13465
Zinc-finger double domain;
172-195 6.85e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 6.85e-03
                          10        20
                  ....*....|....*....|....
gi 1907091767 172 LQTHRRTHTGEKPFKCNQCDKAFS 195
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
451-476 9.76e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.88  E-value: 9.76e-03
                          10        20
                  ....*....|....*....|....*.
gi 1907091767 451 SLQKHIRIHTGEKLYKCNECDKAFSQ 476
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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