|
Name |
Accession |
Description |
Interval |
E-value |
| 2A060602 |
TIGR00918 |
The Eukaryotic (Putative) Sterol Transporter (EST) Family; |
25-1100 |
0e+00 |
|
The Eukaryotic (Putative) Sterol Transporter (EST) Family;
Pssm-ID: 273338 [Multi-domain] Cd Length: 1145 Bit Score: 1944.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 25 KVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALRQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELI 104
Cdd:TIGR00918 91 EVGGRVSQELAYTRQKIGEEAMFTPQLLIQTPHQEGANVLTPEALLQHLDSALKASRVHVYLYNRQWGLEHLCYKSGEPS 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 105 TETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLQWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHG 184
Cdd:TIGR00918 171 TEGGYIEQILEKLIPCLIITPLDCFWEGAKLQGGTAYLPGKPPLQWTNLDPASFLEELKQKMSQVESWEEMLKKAAVGQG 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 185 YMDRPCLNPADPDCPATAPNKNATKPLDVALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPK 264
Cdd:TIGR00918 251 YMERPCLNPADPDCPDTAPNKNSTQPPDVAAVLSGGCYGLSAKYMHWQEELIVGGTKRNRSGKLLSAQALQSMFQLMTPK 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 265 QMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAPNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLML 344
Cdd:TIGR00918 331 QMYEHFKGYYKVHHIGWNEEKAAAVLEAWQRNFSEEVQQSLPKNSSQKILVFSSTTLDDILKKFSDVSAIRIVSGYLLML 410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 345 AYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNkr 424
Cdd:TIGR00918 411 AYACLTMLRWDCAKSQGSVGLAGVLLVALSVAAGLGLCALLGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQN-- 488
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 425 IPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDI 504
Cdd:TIGR00918 489 IPFEERTGECLKRTGASVVLTSISNVTAFFMAALIPIPALRAFSLQAAIVVVFNFAAVLLVFPAILSLDLRRREDRRLDI 568
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 505 FCCFTSPCVSRVIQVEPQAYTEThdntryspppPYSSHSFTHetqitMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPv 584
Cdd:TIGR00918 569 FCCFFSPCSARVIQIEPQAYADG----------SAPPVYSSH-----MQSTVQLRTEYDPGTQHYYTTNEPRSHLSVQP- 632
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 585 tmtQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTR 664
Cdd:TIGR00918 633 ---SDPLSCQSPDIAGSTRDLLSQFEDSKAACLSLPCARWTLATFAEKHYAPFLLQSWAKVVVIFLFLALLGLSLYGTTR 709
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 665 VRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMYIVTQK-ADYPNIQHLLYDLHKSFSNVKYVMLEENKQLPKMWLHYFR 743
Cdd:TIGR00918 710 VQDGLDLTDIVPRDTNEHDFLDAQFRYFSFYNMYAVTQGnFDYPTQQQLLYDLHQSFSSVKYVLKEDNGQLPRMWLHYFR 789
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 744 DWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKQRLVDAHGIINPSAFYIYLTAWVSN 823
Cdd:TIGR00918 790 DWLQGLQKAFDEDWRDGRITKENYRNGSDDAVLAYKLLVQTGHRDKPVDKEQLTTQRLVNADGIINPNAFYIYLSAWVSN 869
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 824 DPVAYAASQANIRPHRPEWVHDKADYMPETrLRIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRSICNNYTSLGLSSY 903
Cdd:TIGR00918 870 DPVAYAASQANIYPHPPEWLHDKNDYDPEN-LRIPAAEPLEYAQFPFYLNGLRETSQFVEAIEHVRAICNNYEGFGLPSY 948
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 904 PNGYPFLFWEQYIGLRHWLLLSVSVVLACTFLVCAVFLLNPWTAGIIVTVLALMTVELFGMMGLIGIKLSAVPVVILIAS 983
Cdd:TIGR00918 949 PSGYPFLFWEQYMGLRHWLLLSISVVLACTFLVCALLLLNPWTAGLIVLVLALMTVELFGMMGLLGIKLSAIPVVILIAS 1028
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 984 VGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLV 1063
Cdd:TIGR00918 1029 VGIGVEFTVHIALGFLTAIGDRNRRAVLALEHMFAPVLDGALSTLLGVLMLAGSEFDFIVRYFFAVLAVLTCLGVLNGLV 1108
|
1050 1060 1070
....*....|....*....|....*....|....*..
gi 1952665864 1064 LLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPSVVR 1100
Cdd:TIGR00918 1109 LLPVLLSMFGPEPEVSPAEGRSRLPTPSPEPPPGGVR 1145
|
|
| 2A060601 |
TIGR00917 |
Niemann-Pick C type protein family; The model describes Niemann-Pick C type protein in ... |
292-1073 |
1.93e-66 |
|
Niemann-Pick C type protein family; The model describes Niemann-Pick C type protein in eukaryotes. The defective protein has been associated with Niemann-Pick disease which is described in humans as autosomal recessive lipidosis. It is characterized by the lysosomal accumulation of unestrified cholesterol. It is an integral membrane protein, which indicates that this protein is most likely involved in cholesterol transport or acts as some component of cholesterol homeostasis. [Transport and binding proteins, Other]
Pssm-ID: 273337 [Multi-domain] Cd Length: 1205 Bit Score: 246.74 E-value: 1.93e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 292 AWQRTYVEVVHQSVAPNsTQKVLSFTT-TTLDDILKSFSDVSVIRVASGYLLMLAYACLTM-----LRWDCSKSQGAVGL 365
Cdd:TIGR00917 533 AWEKAFIQLAKDELLPM-VQATISFSAeRSIEDELKRESTADVITIAISYLVMFAYISLTLgdsprLKSLYVTSKVLLGL 611
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 366 AGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAF---------SETGQNKRIPFEDRTGECLK 436
Cdd:TIGR00917 612 SGILIVMLSVLGSVGVFSAVGLKSTLIIMEVIPFLVLAVGVDNIFILVFFYfyleyfyrqVGVDNEQELTLERRLSRALM 691
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 437 RTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTspcvsrv 516
Cdd:TIGR00917 692 EVGPSITLASLSEILAFALGALIKMPAVRVFSMFAVLAVFLDFLLQITAFVALLVLDFKRTEDKRVDCFPCIK------- 764
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 517 iqvepqayTETHDNTRYsppppysshsfthetqitmqstvqlrteydphthvyyTTAEPRSEisvqpvtmtqdtlSCqsp 596
Cdd:TIGR00917 765 --------TSKSSISAE-------------------------------------KGSGQRKA-------------GL--- 783
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 597 estsstrdllsqfsdsslhcleppctkwtLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVP 676
Cdd:TIGR00917 784 -----------------------------LTRYFKEVYAPVLLHWIVKIVVIAFFVGLLMAGIALSTRVEIGLDQQIVLP 834
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 677 RETREYDFIAAQFKYFSFYNMYIVTQKADYPniqhllYDLHKSFSNVKYVMLEENKQL-------------PKMWLHYFR 743
Cdd:TIGR00917 835 QDSYLQIYFASLTPLLEVGPPFYIVIKGDYN------YTDFESQNKLCTMGGCDKDSIvnvfnnlsyiakpASSWLDDYL 908
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 744 DWLQGLQDAFDSDWETGKimpnnYKNGSDDGVLAYKllvqtgsrdkpiDISQLTKQRlvdahgiINPSAFYIYLTAWVSN 823
Cdd:TIGR00917 909 VWLSPQASCCCRKFTNGT-----FCNGPDPQCFRCA------------DLSSDAQGR-------PSTTQFKEKLPWFLNA 964
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 824 DP--------VAYAASQANIRPHrpewvhdkadympetrlripaAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRSICNNY 895
Cdd:TIGR00917 965 LPsadcakggHAAYSSAVDLQGY---------------------ATIIQASSFRTYHTPLNTQVDFINAMRAAQEFAAKV 1023
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 896 T-SLGLSSYPNGYPFLFWEQYIGLRHWLLLSVSVVLACTFLVCAVFL-LNPWTAGIIVTVLALMTVELFGMMGLIGIKLS 973
Cdd:TIGR00917 1024 SrSSKMEVYPYSVFYVFFEQYLTIWKTAIINLSIALGAIFIVCLFLLqLNALSVVNLIMSVGMAVVFCVGIMHLWSISLN 1103
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 974 AVPVVILIASVGIGVEFTVHVALAFLTAI-GDKNRRAVLALEHMFAPVLDGAVST-LLGVLMLAGSEFDFIVRYFFAVLA 1051
Cdd:TIGR00917 1104 AVSVVNSVMHKGIAIEFCTHINAQFSTGKhFSRNHRAKEALGGMGSSVFSGITLTkLVGVVVLGFSRSEIFVVYYFRMYL 1183
|
810 820
....*....|....*....|..
gi 1952665864 1052 ILTILGVLNGLVLLPVLLSFFG 1073
Cdd:TIGR00917 1184 ALVLLGFLHGLVFLPVLLSVLG 1205
|
|
| Sterol-sensing |
pfam12349 |
Sterol-sensing domain of SREBP cleavage-activation; Sterol regulatory element-binding proteins ... |
356-510 |
6.12e-50 |
|
Sterol-sensing domain of SREBP cleavage-activation; Sterol regulatory element-binding proteins (SREBPs) are membrane-bound transcription factors that promote lipid synthesis in animal cells. They are embedded in the membranes of the endoplasmic reticulum (ER) in a helical hairpin orientation and are released from the ER by a two-step proteolytic process. Proteolysis begins when the SREBPs are cleaved at Site-1, which is located at a leucine residue in the middle of the hydrophobic loop in the lumen of the ER. Upon proteolytic processing SREBP can activate the expression of genes involved in cholesterol biosynthesis and uptake. SCAP stimulates cleavage of SREBPs via fusion of the their two C-termini. This domain is the transmembrane region that traverses the membrane eight times and is the sterol-sensing domain of the cleavage protein. WD40 domains are found towards the C-terminus.
Pssm-ID: 463544 [Multi-domain] Cd Length: 153 Bit Score: 173.92 E-value: 6.12e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 356 CSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETgqNKRIPFEDRTGECL 435
Cdd:pfam12349 1 MVKSKFGLGLAGVIIVLASVASSLGLCAYFGLPLTLIISEVIPFLVLAIGVDNIFLLVKAVVRT--PRSLDVSERIAEAL 78
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1952665864 436 KRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTS 510
Cdd:pfam12349 79 GEVGPSITLTSLTEILAFLLGALTDMPAVQEFCLFAAVAVLFDFLLQMTFFVAVLSLDIRRLESNRLDVACCIRV 153
|
|
| Patched |
pfam02460 |
Patched family; The transmembrane protein Patched is a receptor for the morphogene Sonic ... |
278-1035 |
4.10e-48 |
|
Patched family; The transmembrane protein Patched is a receptor for the morphogene Sonic Hedgehog. This protein associates with the smoothened protein to transduce hedgehog signals.
Pssm-ID: 308203 [Multi-domain] Cd Length: 793 Bit Score: 185.64 E-value: 4.10e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 278 HINWNEDKAAAILEAWQRTYVEVVHQSVAPNSTQkVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLT-----ML 352
Cdd:pfam02460 162 FLKFDEEEVEEDSKEWEDELSQLLHNKYASEHIQ-FTIFHDQILNDELVRNALTLTPFFVIGFFLLLTFSIIVsvtlsSY 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 353 RWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTqVLPFLALGVGVDDVFLLAHAFSETgqNKRIPFEDRTG 432
Cdd:pfam02460 241 TIDWVRSKPILAALGLLSPVMAIVSSFGLLFWMGFPFNSIVC-VTPFLVLAIGVDDMFLMVAAWQRT--TATLSVKKRMG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 433 ECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMdlyrredrrldifccftspc 512
Cdd:pfam02460 318 EALSEAGVSITITSLTDVLSFGIGTYTPTPAIQLFCAYTAVAIFFDFIYQITFFAAIMAI-------------------- 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 513 vsrviqvepqaytethdntrysppppysshsfthetqitmqstvqlrteydphthvyytTAEPrsEISVQPVTMTQDTLS 592
Cdd:pfam02460 378 -----------------------------------------------------------CAKP--EAEGRHCLFVWATSS 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 593 CQSPESTSSTRDllsqfsdsSLHCLEPPctkwtLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLT 672
Cdd:pfam02460 397 PQRIDSEGSEPD--------KSHNIEQL-----KSRFFLDIYCPFLLNPSVRVCMLVLFVVYIAIAIYGCVNIKEGLEPD 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 673 DIVPRETREYDFIAAQFKYFSFY--NMYIVTQKADYPNIQHLLYDLHK---SFSNVKYVMleeNKQLPKMWLHYFRDWLQ 747
Cdd:pfam02460 464 KLVLEDSPLVEYLSLREKHFWPEglQIQVAVNNPPNLTIPESRDRMNEmvdEFENTPYSL---GPNSTLFWLREYENFLS 540
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 748 GLQDAFDSDWEtgkimpnnykngsddgvlaykllvqtgsrdkpidisqltkqrlvdahgiinPSAFYIYLTAWVSNdpva 827
Cdd:pfam02460 541 TLNMEEEEDEE---------------------------------------------------KEWSYGNLPSFLKA---- 565
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 828 yaasqanirPHRPEW----VHDKADYMpetrlripaaepIEYAQFPFYLNGLRDTSDFVEAIEKVRSICNNYTSLGLSSY 903
Cdd:pfam02460 566 ---------PGNSHWagdlVWDDNTTM------------VTKFRFTLAGKGLSTWNDRTRALQEWRSIADQYPEFNVTVF 624
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 904 PNGYPFLfwEQYIGLRHWLLLSVSVVLACTFLVCAVFLLNPWTAGIIVTVLALMTVELFGMMGLIGIKLSAVPVVILIAS 983
Cdd:pfam02460 625 DEDAPFA--DQYLTILPSTIQNIVITLICMFIVCFLFIPNPPCVFVITLAIASIDIGVFGFLSLWGVDLDPISMITIIMS 702
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 1952665864 984 VGIGVEFTVHVALAFLTAIG-DKNRRAVLALEHMFAPVLDGAVSTLLGVLMLA 1035
Cdd:pfam02460 703 IGFSVDFSAHIAYHFVRSRGdTPAERVVDALEALGWPVFQGGLSTILGVLVLL 755
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
322-1075 |
7.88e-20 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 96.08 E-value: 7.88e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 322 DDILKSFSDVSVIRVASGYLLMLAYACLTMLRWdcsksqgAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTqVLPFLA 401
Cdd:COG1033 210 GDIAEAIQSDLAIFFPLALLLILLLLFLFFRSL-------RGVLLPLLVVLLAVIWTLGLMGLLGIPLSPLTI-LVPPLL 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 402 LGVGVDD-VFLLAHAFSETGQNKriPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFA 480
Cdd:COG1033 282 LAIGIDYgIHLLNRYREERRKGL--DKREALREALRKLGPPVLLTSLTTAIGFLSLLFSDIPPIRDFGIVAAIGVLLAFL 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 481 MVLLIFPAILSMdLYRREDRRldifccftspcvsrviqvepqaytethdntrysppppysshsfthetqitmqstvqlrt 560
Cdd:COG1033 360 TSLTLLPALLSL-LPRPKPKT----------------------------------------------------------- 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 561 eydphthvyyttaeprseisvqpvtmtqdtlscQSPESTSSTRDLLSQFSDsslhcleppctkwtlssFAEKHYapfllk 640
Cdd:COG1033 380 ---------------------------------RRLKKPPELGRLLAKLAR-----------------FVLRRP------ 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 641 pkakVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREY---DFIAAQFKyfSFYNMYIVTqkadypniqhllyDLH 717
Cdd:COG1033 404 ----KVILVVALVLAVVSLYGISRLKVEYDFEDYLPEDSPIRqdlDFIEENFG--GSDPLEVVV-------------DTG 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 718 KSFSNVKYVMLEenkqlpkmwlhyfrdWLQGLQDAFDSDWETGKImpnnykngsddgvlaykllvqtgsrdkpidISqlt 797
Cdd:COG1033 465 EPDGLKDPEVLK---------------EIDRLQDYLESLPEVGKV------------------------------LS--- 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 798 kqrLVDAHGIINpSAFYIYLTAWVSNDPVAYAASQANIRPHRPEwVHDKADYMPETRlripaaepiEYAQFPFYLNGLrD 877
Cdd:COG1033 497 ---LADLVKELN-QALNEGDPKYYALPESRELLAQLLLLLSSPP-GDDLSRFVDEDY---------SAARVTVRLKDL-D 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 878 TSDFVEAIEKVRS-ICNNYTSLGLSSYPNGYPFLFWEQYIGLRHWLLLSVSVVLACTFLVCAVFLLNpWTAGIIVTVLAL 956
Cdd:COG1033 562 SEEIKALVEEVRAfLAENFPPDGVEVTLTGSAVLFAAINESVIESQIRSLLLALLLIFLLLLLAFRS-LRLGLISLIPNL 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 957 MTVEL-FGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAI--GDKNRRAVL-ALEHMFAPVLDGAVSTLLGVL 1032
Cdd:COG1033 641 LPILLtFGLMGLLGIPLNIATAVVASIALGIGVDYTIHFLSRYREERrkGGDLEEAIRrALRTTGKAILFTSLTLAAGFG 720
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|..
gi 1952665864 1033 MLAGSEFDFIvRYF---------FAVLAILTIlgvlnglvlLPVLLSFFGPY 1075
Cdd:COG1033 721 VLLFSSFPPL-ADFglllalgllVALLAALLL---------LPALLLLLDPR 762
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
867-1077 |
3.12e-14 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 77.59 E-value: 3.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 867 QFPFYLNGLRDTSDFVEAIEKVRSICNNYTSLGLSSYPNGYPFLFWEQYIGLRHWLLLSVSVVLACTFLVCAVFLLNPWT 946
Cdd:COG1033 165 VVTLDPDPLSSDLDRKEVVAEIRAIIAKYEDPGVEVYLTGFPVLRGDIAEAIQSDLAIFFPLALLLILLLLFLFFRSLRG 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 947 AGIIVTVLALMTVELFGMMGLIGIKLS----AVPVVILiasvGIGVEFTVHVALAFLTAI---GDKNRRAVLALEHMFAP 1019
Cdd:COG1033 245 VLLPLLVVLLAVIWTLGLMGLLGIPLSpltiLVPPLLL----AIGIDYGIHLLNRYREERrkgLDKREALREALRKLGPP 320
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1952665864 1020 VLDGAVSTLLGVLMLAGSEFDfIVRYF---------FAVLAILTIlgvlnglvlLPVLLSFFGPYPE 1077
Cdd:COG1033 321 VLLTSLTTAIGFLSLLFSDIP-PIRDFgivaaigvlLAFLTSLTL---------LPALLSLLPRPKP 377
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
363-501 |
3.70e-13 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 74.13 E-value: 3.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 363 VGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPfLALGVGVDDVFLLAHAFSEtGQNKRIPFEDRTGECLKRTGASV 442
Cdd:COG1033 631 LGLISLIPNLLPILLTFGLMGLLGIPLNIATAVVAS-IALGIGVDYTIHFLSRYRE-ERRKGGDLEEAIRRALRTTGKAI 708
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1952665864 443 ALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMdLYRREDRR 501
Cdd:COG1033 709 LFTSLTLAAGFGVLLFSSFPPLADFGLLLALGLLVALLAALLLLPALLLL-LDPRIAKK 766
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
323-506 |
2.38e-07 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 55.23 E-value: 2.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 323 DILKSFSDVSVIRVASGYLLMLAYACLTMLRWdcsksqgAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLaL 402
Cdd:TIGR00921 186 DIEREFGKDMGTTMAISGILVVLVLLLDFKRW-------WRPLLPLVIILFGVAWVLGIMGWLGIPLYATTLLAVPML-I 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 403 GVGVDDVFLLAHAFSETGQNKRiPFEDRTGECLKRTGASVALTSISNVtAFFMAALIPI-PALRAFSLQAAVVVVFNFAM 481
Cdd:TIGR00921 258 GVGIDYGIQTLNRYEEERDIGR-AKGEAIVTAVRRTGRAVLIALLTTS-AGFAALALSEfPMVSEFGLGLVAGLITAYLL 335
|
170 180
....*....|....*....|....*.
gi 1952665864 482 VLLIFPAIL-SMDLYRREDRRLDIFC 506
Cdd:TIGR00921 336 TLLVLPALLqSIDIGREKVKKEIIAI 361
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
363-490 |
3.38e-06 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 51.76 E-value: 3.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 363 VGLAGVLLVALSVAAGLGLCSLIGISFNAaTTQVLPFLALGVGVDDVFLLAHAFSETgQNKRIPFEDRTgECLKRTGASV 442
Cdd:TIGR00921 593 KAVFPLIAIGSGILWAIGLMGLRGIPSFL-AMATTISIILGLGMDYSIHLAERYFEE-RKEHGPKEAIT-HTMERTGPGI 669
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1952665864 443 ALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAIL 490
Cdd:TIGR00921 670 LFSGLTTAGGFLSLLLSHFPIMRNFGLVQGIGVLSSLTAALVVFPALL 717
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
335-488 |
4.36e-06 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 51.39 E-value: 4.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 335 RVASGYLLMLAYA---CLTMLRwdcskSQGAVGLAGVLLV-ALSVAAGLGLCSLIGISFNAATTQVLpFLALGVGVD-DV 409
Cdd:COG4258 638 RNDALWLLLLALLlilLLLLLR-----LRSLRRALRVLLPpLLAVLLTLAILGLLGIPLNLFHLIAL-LLVLGIGIDyAL 711
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1952665864 410 FllahaFSETGQNKRIpfedrtgecLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPA 488
Cdd:COG4258 712 F-----FTEGLLDKGE---------LARTLLSILLAALTTLLGFGLLAFSSTPALRSFGLTVLLGILLALLLAPLLAPR 776
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
920-1037 |
5.26e-06 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 51.01 E-value: 5.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 920 HWLLLSVSVVlactFLVCAVFLLNPWTAGIIVTVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFtvhvALAFL 999
Cdd:COG4258 643 WLLLLALLLI----LLLLLLRLRSLRRALRVLLPPLLAVLLTLAILGLLGIPLNLFHLIALLLVLGIGIDY----ALFFT 714
|
90 100 110
....*....|....*....|....*....|....*...
gi 1952665864 1000 TAIGDKNRRAvlalEHMFAPVLdGAVSTLLGVLMLAGS 1037
Cdd:COG4258 715 EGLLDKGELA----RTLLSILL-AALTTLLGFGLLAFS 747
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
295-490 |
1.54e-05 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 49.61 E-value: 1.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 295 RTYVEVVhQSVAPNSTQKVLSFTTTTlDDILKSFsdvsvIRVASGYLLMLAYACLTMLRwdcSKSQGAVGLAGVLLVALS 374
Cdd:TIGR03480 683 RRFVRAV-RKVAPDATGAPVSILESG-DTVVGAF-----LQAFIYALVAITVLLLLTLR---RVRDVLLVLAPLLLAGLL 752
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 375 VAAglgLCSLIGISFNAATTQVLPFLaLGVGVDDVFLLAHAFSEtGQNKRIPFEDRTGEclkrtgaSVALTSISNVTAFF 454
Cdd:TIGR03480 753 TVA---AMVLLGIPFNFANIIALPLL-LGLGVDFGIYMVHRWRN-GVDSGNLLQSSTAR-------AVFFSALTTATAFG 820
|
170 180 190
....*....|....*....|....*....|....*.
gi 1952665864 455 MAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAIL 490
Cdd:TIGR03480 821 SLAVSSHPGTASMGILLSLGLGLTLLCTLIFLPALL 856
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
361-492 |
3.08e-05 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 48.61 E-value: 3.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 361 GAVGLAGV--LLVALSVAAGLGLCSLIG--ISFNAATTQVLPFLALGVGVD-DVFLLAhAFSE---TGQNKripfEDRTG 432
Cdd:COG2409 191 RSLVAALLplLTAGLAVGVALGLLALLAafTDVSSFAPNLLTMLGLGVGIDyALFLVS-RYREelrAGEDR----EEAVA 265
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1952665864 433 ECLKRTGASVAltsISNVT---AFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSM 492
Cdd:COG2409 266 RAVATAGRAVL---FSGLTvaiALLGLLLAGLPFLRSMGPAAAIGVAVAVLAALTLLPALLAL 325
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
329-501 |
1.10e-04 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 46.77 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 329 SDVSVIRVASGY----LLMLAYACLTMLrwdcsksqgavgLAGVLLVALSVAAGLGLCSLI-----GISFNAATTqvlpf 399
Cdd:COG4258 249 HDISTIGLISLLgillLLLLVFRSLRPL------------LLGLLPVAVGALAGLAAVSLVfgsvhGITLGFGSS----- 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 400 LaLGVGVD-DVFLLAHAFSETGQNKRIPfedrtgecLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFN 478
Cdd:COG4258 312 L-IGVAVDySLHYLTHRRAAGEWDPRAA--------LRRIWPTLLLGLLTTVLGYLALLFSPFPGLRQLGVFAAAGLLAA 382
|
170 180
....*....|....*....|...
gi 1952665864 479 FAMVLLIFPAilsmdLYRREDRR 501
Cdd:COG4258 383 ALTTLLWLPL-----LLPRAAPR 400
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
298-492 |
3.15e-04 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 44.59 E-value: 3.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 298 VEVVHQSVAPNSTQKVLSFTTTTLDDILKSFS-DVSVIRVASgylLMLAYACLTMLRwdcsksqGAVGLAGVLL--VALS 374
Cdd:pfam03176 110 RDAVEQAPPPEGLKAYLTGPAATVADLRDAGDrDLGLIEAVT---LVVIFIILLIVY-------RSVVAALLPLltVGLS 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 375 VAAGLGLCS-LIGISFNAATTQVLPF---LALGVGVD-DVFLLA--HAFSETGQNKripfEDRTGECLKRTGASVALTSI 447
Cdd:pfam03176 180 LGAAQGLVAiLAHILGIGLSTFALNLlvvLLIAVGTDyALFLVSryREELRAGEDR----EEAVIRAVRGTGKVVTAAGL 255
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1952665864 448 SNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSM 492
Cdd:pfam03176 256 TVAIAMLALSFARLPVFAQVGPTIAIGVLVDVLAALTLLPALLAL 300
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
922-1045 |
4.77e-04 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 44.44 E-value: 4.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 922 LLLSVSVVLACTFLVCAVFLL---NPWTAGIIVTVLALMTVEL-FGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALA 997
Cdd:TIGR00921 191 FGKDMGTTMAISGILVVLVLLldfKRWWRPLLPLVIILFGVAWvLGIMGWLGIPLYATTLLAVPMLIGVGIDYGIQTLNR 270
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1952665864 998 FLTAIG---DKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRY 1045
Cdd:TIGR00921 271 YEEERDigrAKGEAIVTAVRRTGRAVLIALLTTSAGFAALALSEFPMVSEF 321
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
899-1055 |
2.32e-03 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 42.52 E-value: 2.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 899 GLSSYPNGYPFLFWEQY----IGLRHWLLLSVSVVLACTFLV-----CAVFLLNPWTAGIIVTVlalmtvelfGMMGLIG 969
Cdd:TIGR00921 546 GVKVGVTGLPVAFAEMHelvnEGMRRMTIAGAILVLMILLAVfrnpiKAVFPLIAIGSGILWAI---------GLMGLRG 616
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 970 IKLSAVPVVILIASVGIGVEFTVHVALAFL---TAIGDKNrrAVL-ALEHMFAPVLDGAVSTLLGVLMLAGSEFDFI--- 1042
Cdd:TIGR00921 617 IPSFLAMATTISIILGLGMDYSIHLAERYFeerKEHGPKE--AIThTMERTGPGILFSGLTTAGGFLSLLLSHFPIMrnf 694
|
170
....*....|....*...
gi 1952665864 1043 -----VRYFFAVLAILTI 1055
Cdd:TIGR00921 695 glvqgIGVLSSLTAALVV 712
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
915-1081 |
4.97e-03 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 41.52 E-value: 4.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 915 YIGLRH-WLLLSVSVVLActflvcavfllnpwtAGIIVTV-LALMTVelfGMMGLIGiklsavpVVILIASVGIGVEFTV 992
Cdd:TIGR03480 287 WLALRSpRLVFAVLVTLI---------------VGLILTAaFATLAV---GHLNLIS-------VAFAVLFIGLGVDFAI 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 993 HVALAFLTAI--GDKNRRAVL-ALEHMFAPVLDGAVSTLLGVLML-----AG-SEFDFI--VRYFFAVLAILTIlgvlng 1061
Cdd:TIGR03480 342 QFSLRYREERfrGGNHREALSvAARRMGAALLLAALATAAGFFAFlptdyKGvSELGIIagTGMFIALFVTLTV------ 415
|
170 180
....*....|....*....|
gi 1952665864 1062 lvlLPVLLSFFGPYPEVSPA 1081
Cdd:TIGR03480 416 ---LPALLRLLRPPRRRKPP 432
|
|
| FucP |
COG0738 |
Fucose permease [Carbohydrate transport and metabolism]; |
949-1081 |
6.15e-03 |
|
Fucose permease [Carbohydrate transport and metabolism];
Pssm-ID: 440501 [Multi-domain] Cd Length: 391 Bit Score: 40.61 E-value: 6.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 949 IIVTVLALMTVelfgmmGLIGIKLSAVPVVILIASVGIGVEFT-VHVAL-AFLTAIGDKNRRAVLALEHMFAPVldGAVS 1026
Cdd:COG0738 75 GLLLGLLLMAL------GLLLFALAPSYPLLLLALFLLGLGLGlLDVAAnPYVAALGPETAASRLNLLHAFFSL--GALL 146
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1952665864 1027 TLLGVLMLAGSEFDFIVRYFFAVLAILTILGvlnglvllpVLLSFFGPYPEVSPA 1081
Cdd:COG0738 147 GPLLGGLLILLGLSLSWHLPYLILAVLLLLL---------ALLFLRSKLPEIEEE 192
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1159-1278 |
9.64e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 40.69 E-value: 9.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 1159 ARSTVVHPEARHHPP----SNPRQQPPLDSEPLPPGRPGQQPRREPPREGLRPPPY-RPRRDAFEISTDGHPGPGSRDRA 1233
Cdd:PHA03247 2868 SRSPAAKPAAPARPPvrrlARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPpPPPQPQPPPPPPPRPQPPLAPTT 2947
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952665864 1234 GPRGA-------------------------RSNNPRHPVFTAMGSSAPSYCQPITTVTASASvTVAVHPP 1278
Cdd:PHA03247 2948 DPAGAgepsgavpqpwlgalvpgrvavprfRVPQPAPSREAPASSTPPLTGHSLSRVSSWAS-SLALHEE 3016
|
|
| |
