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Conserved domains on  [gi|1952781897|ref|XP_038472700|]
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protein O-mannosyl-transferase 1 isoform X6 [Canis lupus familiaris]

Protein Classification

dolichyl-phosphate-mannose--protein mannosyltransferase( domain architecture ID 11449133)

dolichyl-phosphate-mannose--protein mannosyltransferase is a glycosyltransferase family 39 protein that transfers mannosyl residues to the hydroxyl group of serine or threonine residues, initiating the assembly of O-mannosyl glycans

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
beta-trefoil_MIR_POMT1 cd23281
MIR domain, beta-trefoil fold, found in protein O-mannosyl-transferase 1 (POMT1) and similar ...
182-376 1.78e-127

MIR domain, beta-trefoil fold, found in protein O-mannosyl-transferase 1 (POMT1) and similar proteins; POMT1 (EC 2.4.1.109), also called dolichyl-phosphate-mannose--protein mannosyltransferase 1, belongs to the glycosyltransferase 39 family. It transfers mannosyl residues to the hydroxyl group of serine or threonine residues. Coexpression of both POMT1 and POMT2 is necessary for enzyme activity, expression of either POMT1 or POMT2 alone is insufficient. It is essentially dedicated to O-mannosylation of alpha-DAG1 and few other proteins, but not of cadherins and protocaherins. POMT1 contains a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


:

Pssm-ID: 467752 [Multi-domain]  Cd Length: 191  Bit Score: 373.57  E-value: 1.78e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 182 VAYGSQVTLKNVFGkpVPCWLHSHQSTYPMIYENGRGSSHQQQVTCYPFKDVNNWWIVKDPGRHQLVVNNPPRPVRHGDV 261
Cdd:cd23281     1 VAYGSQVTLRNTHG--SPCWLHSHKHRYPIKYPDGRGSSHQQQVTCYPFKDVNNWWIIKDPGRQDLAVDDPPRPVRHGDI 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 262 VQLVHGMTTRFLNTHDVAAPLSPHSQEVSCYVDYNISMPSQNLWRLDIVNRESDTEVWKTILSEVRLVHVNTSAVLKLSG 341
Cdd:cd23281    79 IQLVHGKTGRFLNSHDVAAPLSPTHQEVSCYIDYNISMPAQNLWRIEIVNRDSEGDTWKAIKSQFRLIHVNTSAALKLSG 158
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1952781897 342 AHLPDWGFQQLEVVGEKLSRgyHESMVWNVEEHRY 376
Cdd:cd23281   159 KQLPDWGFGQLEVATDRAGN--QSSTVWNVEEHRY 191
PMT_4TMC pfam16192
C-terminal four TMM region of protein-O-mannosyltransferase; PMT_4TMC is the C-terminal four ...
405-629 2.66e-55

C-terminal four TMM region of protein-O-mannosyltransferase; PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes.


:

Pssm-ID: 465056  Cd Length: 198  Bit Score: 186.60  E-value: 2.66e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 405 ARFLELQWRMLTAKSD-DSEHKYSSSPLDWVTLDTSIAYWLHPRTSAQIHLLGNIVIWASASLAMVVYVLLFFWYLLRRR 483
Cdd:pfam16192   1 KKFIELQKAMLTSNNGlTPSHPYASRPWEWPLLLRGIRFWGWDDRNAQIYLLGNPVIWWSSTAAILVFVLLLLAYLLRWQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 484 RSICDIPEETkccrciptlleassgkckdqagiavtpgySWLRWVLAGALCAGGWAVNYLPFFMMEKTLFLYHYLPALTF 563
Cdd:pfam16192  81 RGYYDLSDDW-----------------------------TRSRFYYSGGFLLLGWALHYLPFFLMGRQLFLHHYLPALYF 131
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1952781897 564 QILLLPVVLQHVSDHLCR--SQLLRSLFSALVVAWYSCACHVFNTLRPLTYGDKSLSpSELKALRWKD 629
Cdd:pfam16192 132 AILALGALLDFLLSLFRRlpRSLRKRVGYAIVVVLLALVIYVFIYFSPLTYGMPGTS-EECKKLKWLS 198
PMT pfam02366
Dolichyl-phosphate-mannose-protein mannosyltransferase; This is a family of ...
1-150 8.92e-41

Dolichyl-phosphate-mannose-protein mannosyltransferase; This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is the Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as Swiss:O52327 are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.


:

Pssm-ID: 396786 [Multi-domain]  Cd Length: 245  Bit Score: 148.61  E-value: 8.92e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897   1 MAYQILLELGFSHCAAMGAALLMLIENALITQSRLMLLESVLIFFNLLAVLSYLKFsnsQKHRPFSLSWWFWLMLTGVAC 80
Cdd:pfam02366  99 LVYLTAKRLGFSKNTALLAALLVILENSFITLSRYILLDSPLLFFTTLSMYCFWKF---ERKAPFSRKWWLWLLLTGIAL 175
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897  81 SCAVGVKYMGIFTYLLVLAVASVHAWHLIGDQTLSNVCVLCHLLARAAALLVIPTLMYLLFFYVHLILVY 150
Cdd:pfam02366 176 GLALSTKGVGLFTVLPVGLLTIWHLWQLLGDLSLLLKSIWKHLFARLFCLIVIPWALYLAQFYVHFWLLF 245
 
Name Accession Description Interval E-value
beta-trefoil_MIR_POMT1 cd23281
MIR domain, beta-trefoil fold, found in protein O-mannosyl-transferase 1 (POMT1) and similar ...
182-376 1.78e-127

MIR domain, beta-trefoil fold, found in protein O-mannosyl-transferase 1 (POMT1) and similar proteins; POMT1 (EC 2.4.1.109), also called dolichyl-phosphate-mannose--protein mannosyltransferase 1, belongs to the glycosyltransferase 39 family. It transfers mannosyl residues to the hydroxyl group of serine or threonine residues. Coexpression of both POMT1 and POMT2 is necessary for enzyme activity, expression of either POMT1 or POMT2 alone is insufficient. It is essentially dedicated to O-mannosylation of alpha-DAG1 and few other proteins, but not of cadherins and protocaherins. POMT1 contains a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


Pssm-ID: 467752 [Multi-domain]  Cd Length: 191  Bit Score: 373.57  E-value: 1.78e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 182 VAYGSQVTLKNVFGkpVPCWLHSHQSTYPMIYENGRGSSHQQQVTCYPFKDVNNWWIVKDPGRHQLVVNNPPRPVRHGDV 261
Cdd:cd23281     1 VAYGSQVTLRNTHG--SPCWLHSHKHRYPIKYPDGRGSSHQQQVTCYPFKDVNNWWIIKDPGRQDLAVDDPPRPVRHGDI 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 262 VQLVHGMTTRFLNTHDVAAPLSPHSQEVSCYVDYNISMPSQNLWRLDIVNRESDTEVWKTILSEVRLVHVNTSAVLKLSG 341
Cdd:cd23281    79 IQLVHGKTGRFLNSHDVAAPLSPTHQEVSCYIDYNISMPAQNLWRIEIVNRDSEGDTWKAIKSQFRLIHVNTSAALKLSG 158
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1952781897 342 AHLPDWGFQQLEVVGEKLSRgyHESMVWNVEEHRY 376
Cdd:cd23281   159 KQLPDWGFGQLEVATDRAGN--QSSTVWNVEEHRY 191
PMT_4TMC pfam16192
C-terminal four TMM region of protein-O-mannosyltransferase; PMT_4TMC is the C-terminal four ...
405-629 2.66e-55

C-terminal four TMM region of protein-O-mannosyltransferase; PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes.


Pssm-ID: 465056  Cd Length: 198  Bit Score: 186.60  E-value: 2.66e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 405 ARFLELQWRMLTAKSD-DSEHKYSSSPLDWVTLDTSIAYWLHPRTSAQIHLLGNIVIWASASLAMVVYVLLFFWYLLRRR 483
Cdd:pfam16192   1 KKFIELQKAMLTSNNGlTPSHPYASRPWEWPLLLRGIRFWGWDDRNAQIYLLGNPVIWWSSTAAILVFVLLLLAYLLRWQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 484 RSICDIPEETkccrciptlleassgkckdqagiavtpgySWLRWVLAGALCAGGWAVNYLPFFMMEKTLFLYHYLPALTF 563
Cdd:pfam16192  81 RGYYDLSDDW-----------------------------TRSRFYYSGGFLLLGWALHYLPFFLMGRQLFLHHYLPALYF 131
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1952781897 564 QILLLPVVLQHVSDHLCR--SQLLRSLFSALVVAWYSCACHVFNTLRPLTYGDKSLSpSELKALRWKD 629
Cdd:pfam16192 132 AILALGALLDFLLSLFRRlpRSLRKRVGYAIVVVLLALVIYVFIYFSPLTYGMPGTS-EECKKLKWLS 198
PMT pfam02366
Dolichyl-phosphate-mannose-protein mannosyltransferase; This is a family of ...
1-150 8.92e-41

Dolichyl-phosphate-mannose-protein mannosyltransferase; This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is the Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as Swiss:O52327 are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.


Pssm-ID: 396786 [Multi-domain]  Cd Length: 245  Bit Score: 148.61  E-value: 8.92e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897   1 MAYQILLELGFSHCAAMGAALLMLIENALITQSRLMLLESVLIFFNLLAVLSYLKFsnsQKHRPFSLSWWFWLMLTGVAC 80
Cdd:pfam02366  99 LVYLTAKRLGFSKNTALLAALLVILENSFITLSRYILLDSPLLFFTTLSMYCFWKF---ERKAPFSRKWWLWLLLTGIAL 175
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897  81 SCAVGVKYMGIFTYLLVLAVASVHAWHLIGDQTLSNVCVLCHLLARAAALLVIPTLMYLLFFYVHLILVY 150
Cdd:pfam02366 176 GLALSTKGVGLFTVLPVGLLTIWHLWQLLGDLSLLLKSIWKHLFARLFCLIVIPWALYLAQFYVHFWLLF 245
MIR pfam02815
MIR domain; The MIR (protein mannosyltransferase, IP3R and RyR) domain is a domain that may ...
193-355 9.17e-17

MIR domain; The MIR (protein mannosyltransferase, IP3R and RyR) domain is a domain that may have a ligand transferase function.


Pssm-ID: 397103 [Multi-domain]  Cd Length: 185  Bit Score: 78.56  E-value: 9.17e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 193 VFGKPVPCWLHSHQSTYPMIYENGRGSsHQQQVTCYPFKDVNN----WWIVkdpgrhqLVVNNPP---RPVRHGDVVQLV 265
Cdd:pfam02815   3 LKGGDVVRLFHSHQDEYLTGSEQQQKQ-PFLRITLYPHGDANNsarsLWRI-------EVVRHDAwrgGLIKWGSPFRLR 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 266 HGMTTRFLNTHDV-AAPLSPHS---QEVSCYvDYNISM----PSQNLWRLDIVNRESDTEvwKTILSEVRLVHVNTSAVL 337
Cdd:pfam02815  75 HLTTGRYLHSHEEqKPPLVEKEdwqKEVSAY-GFRGFPgdndIVEIFEKKSTTGMGSDRI--KPGDSYFRLQHVCTGCWL 151
                         170       180
                  ....*....|....*....|
gi 1952781897 338 KLSGAHLPDWGF--QQLEVV 355
Cdd:pfam02815 152 FSHSVKLPKWGFgpEQQKVT 171
PMT1 COG1928
Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, ...
407-631 2.36e-09

Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441531 [Multi-domain]  Cd Length: 495  Bit Score: 59.91  E-value: 2.36e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 407 FLELQWRMLT-AKSDDSEHKYSSSPLDWVTLDTSIAYWLH-----------PRTSAQIHLLGNIVIWASASLAMVVyvlL 474
Cdd:COG1928   307 LWHYHQQILSfHTGLSSPHPYESKPWSWPLMLRPVSYYYEtgqtgtlgcgaGKCVRAVLAIGNPALWWLGLPALLW---L 383
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 475 FFWYLLRRrrsicdipeetkccrciptlleassgkckdqagiavtpgySWlrwvLAGALCAgGWAVNYLPFFM-MEKTLF 553
Cdd:COG1928   384 LWRWIARR----------------------------------------DW----RAGAVLV-GYAAGWLPWFLyLDRTMF 418
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 554 LYHYLPALTFQILLLPVVLQHV---SDHLCRSQLLR---SLFSALVVAwyscachVFNTLRPLTYGDkSLSPSELKALRW 627
Cdd:COG1928   419 FFYAIPFVPFLVLALALVLGLIlgpARASERRRLGRlvvGLYVGLVVA-------NFAFFYPILTGL-PIPYDEWQARMW 490

                  ....
gi 1952781897 628 KDSW 631
Cdd:COG1928   491 FPSW 494
MIR smart00472
Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases;
182-239 9.23e-07

Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases;


Pssm-ID: 197746 [Multi-domain]  Cd Length: 57  Bit Score: 46.18  E-value: 9.23e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897  182 VAYGSQVTLKNVFGkpvPCWLHSHQSTYPMIyengrgSSHQQQVTCYPFK--DVNNWWIV 239
Cdd:smart00472   4 VRWGDVVRLRHVTT---GRYLHSHDEKLPPW------GDGQQEVTGYGNPaiDANTLWLI 54
ArnT COG1807
PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA ...
15-101 1.60e-03

PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441412 [Multi-domain]  Cd Length: 309  Bit Score: 41.15  E-value: 1.60e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897  15 AAMGAALLMLIENALITQSRLMLLESVLIFFNLLAVLSYLKFSNSQKhrpfslswWFWLMLTGVACSCAVGVKYMGIFTY 94
Cdd:COG1807   113 AALLAALLLLTSPLLLLFGRLATPDALLLLFWTLALYALLRALERRR--------LRWLLLAGLALGLGFLTKGPVALLL 184

                  ....*..
gi 1952781897  95 LLVLAVA 101
Cdd:COG1807   185 PGLALLL 191
 
Name Accession Description Interval E-value
beta-trefoil_MIR_POMT1 cd23281
MIR domain, beta-trefoil fold, found in protein O-mannosyl-transferase 1 (POMT1) and similar ...
182-376 1.78e-127

MIR domain, beta-trefoil fold, found in protein O-mannosyl-transferase 1 (POMT1) and similar proteins; POMT1 (EC 2.4.1.109), also called dolichyl-phosphate-mannose--protein mannosyltransferase 1, belongs to the glycosyltransferase 39 family. It transfers mannosyl residues to the hydroxyl group of serine or threonine residues. Coexpression of both POMT1 and POMT2 is necessary for enzyme activity, expression of either POMT1 or POMT2 alone is insufficient. It is essentially dedicated to O-mannosylation of alpha-DAG1 and few other proteins, but not of cadherins and protocaherins. POMT1 contains a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


Pssm-ID: 467752 [Multi-domain]  Cd Length: 191  Bit Score: 373.57  E-value: 1.78e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 182 VAYGSQVTLKNVFGkpVPCWLHSHQSTYPMIYENGRGSSHQQQVTCYPFKDVNNWWIVKDPGRHQLVVNNPPRPVRHGDV 261
Cdd:cd23281     1 VAYGSQVTLRNTHG--SPCWLHSHKHRYPIKYPDGRGSSHQQQVTCYPFKDVNNWWIIKDPGRQDLAVDDPPRPVRHGDI 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 262 VQLVHGMTTRFLNTHDVAAPLSPHSQEVSCYVDYNISMPSQNLWRLDIVNRESDTEVWKTILSEVRLVHVNTSAVLKLSG 341
Cdd:cd23281    79 IQLVHGKTGRFLNSHDVAAPLSPTHQEVSCYIDYNISMPAQNLWRIEIVNRDSEGDTWKAIKSQFRLIHVNTSAALKLSG 158
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1952781897 342 AHLPDWGFQQLEVVGEKLSRgyHESMVWNVEEHRY 376
Cdd:cd23281   159 KQLPDWGFGQLEVATDRAGN--QSSTVWNVEEHRY 191
beta-trefoil_MIR_PMT cd23276
MIR domain, beta-trefoil fold, found in the family of dolichyl-phosphate-mannose-protein ...
182-374 4.99e-67

MIR domain, beta-trefoil fold, found in the family of dolichyl-phosphate-mannose-protein mannosyltransferase (PMT); The PMT (EC 2.4.1.109) family includes mammalian protein O-mannosyl-transferases (POMT1 and POMT2) and yeast PMT1-7. PMTs are responsible for O-linked glycosylation of proteins. They catalyze the transfer of mannose to seryl and threonyl residues of secretory proteins. Protein O-glycosylation is essential for cell wall rigidity and cell integrity. Members in this family contain a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


Pssm-ID: 467747 [Multi-domain]  Cd Length: 185  Bit Score: 217.20  E-value: 4.99e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 182 VAYGSQVTLKNVfgKPVPCWLHSHQSTYPMIyengrgsSHQQQVTCYPFKDVNNWWIVKDPGRHQLVVNNPPRPVRHGDV 261
Cdd:cd23276     1 VAYGSQITLRNA--NSGGGYLHSHNHTYPDG-------SKQQQVTGYGHKDENNWWQILKPRGDPSSNPPDPEYVRDGDE 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 262 VQLVHGMTTRFLNTHDVAAPLSPHSQEVSCYVDYNISMPSQNLWRLDIVNRESDTE--VWKTILSEVRLVHVNTSAVLKL 339
Cdd:cd23276    72 VRLLHKETNRYLRTHDAAAPVTSKHKEVSAYPDENEDGDDNDLWVVEIVKDEGKLEdkRIKPLTTRFRLRNKKTGCYLTS 151
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1952781897 340 SGAHLPDWGFQQLEVVGEKLSRGyHESMVWNVEEH 374
Cdd:cd23276   152 SGVKLPEWGFRQGEVVCSKNKES-DPSTLWNVEEN 185
PMT_4TMC pfam16192
C-terminal four TMM region of protein-O-mannosyltransferase; PMT_4TMC is the C-terminal four ...
405-629 2.66e-55

C-terminal four TMM region of protein-O-mannosyltransferase; PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes.


Pssm-ID: 465056  Cd Length: 198  Bit Score: 186.60  E-value: 2.66e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 405 ARFLELQWRMLTAKSD-DSEHKYSSSPLDWVTLDTSIAYWLHPRTSAQIHLLGNIVIWASASLAMVVYVLLFFWYLLRRR 483
Cdd:pfam16192   1 KKFIELQKAMLTSNNGlTPSHPYASRPWEWPLLLRGIRFWGWDDRNAQIYLLGNPVIWWSSTAAILVFVLLLLAYLLRWQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 484 RSICDIPEETkccrciptlleassgkckdqagiavtpgySWLRWVLAGALCAGGWAVNYLPFFMMEKTLFLYHYLPALTF 563
Cdd:pfam16192  81 RGYYDLSDDW-----------------------------TRSRFYYSGGFLLLGWALHYLPFFLMGRQLFLHHYLPALYF 131
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1952781897 564 QILLLPVVLQHVSDHLCR--SQLLRSLFSALVVAWYSCACHVFNTLRPLTYGDKSLSpSELKALRWKD 629
Cdd:pfam16192 132 AILALGALLDFLLSLFRRlpRSLRKRVGYAIVVVLLALVIYVFIYFSPLTYGMPGTS-EECKKLKWLS 198
beta-trefoil_MIR_PMT4-like cd23285
MIR domain, beta-trefoil fold, found in Saccharomyces cerevisiae ...
182-373 1.26e-50

MIR domain, beta-trefoil fold, found in Saccharomyces cerevisiae dolichyl-phosphate-mannose--protein mannosyltransferase 4 (PMT4) and similar proteins; Dolichyl-phosphate-mannose-protein mannosyltransferases (EC 2.4.1.109), also called PMTs, are responsible for O-linked glycosylation of proteins. They catalyze the transfer of mannose to seryl and threonyl residues of secretory proteins. Protein O-glycosylation is essential for cell wall rigidity and cell integrity. In Saccharomyces cerevisiae, a family of protein mannosyltransferases coded for by seven genes (PMT1-7). The family includes PMT4. It forms a functional homodimer and may form a heterodimer with PMT6. PMT4 specifically acts on secretory proteins with an ER-luminally oriented Ser/Thr-rich region flanked by a membrane anchor such as FUS1, AXL2, GAS1, KEX2, MID2, WSC1, WSC2, OPY2, PRM5, RAX2, or YNL176. Members in this family contain a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


Pssm-ID: 467756 [Multi-domain]  Cd Length: 187  Bit Score: 173.64  E-value: 1.26e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 182 VAYGSQVTLKNVFGKpvpCWLHSHQSTYPMIYENGRGSSHQQQVTCYPFKDVNNWWIVKdPGRHQLVVNNPPRPVRHGDV 261
Cdd:cd23285     1 VHYGDVITIKHRDTN---AFLHSHPERYPLRYEDGRISSQGQQVTGYPHKDANNQWQIL-PTDPIDEHEGTGRPVRNGDL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 262 VQLVHGMTTRFLNTHDVAAPLSPHSQEVSC------YVDYNISmpsqnLWRLDIVNREsDTEVWKTILSEVRLVHVNTSA 335
Cdd:cd23285    77 IRLRHVSTDTYLLTHDVASPLTPTNMEFTTvsdddtDERYNET-----LFRVEIEDTD-EGDVLKTKSSHFRLIHVDTNV 150
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1952781897 336 VLKLSGAHLPDWGFQQLEVVGEKlsRGYHESMVWNVEE 373
Cdd:cd23285   151 ALWTHKKPLPDWGFGQQEVNGNK--NIKDKSNIWVVDD 186
beta-trefoil_MIR_PMT2-like cd23284
MIR domain, beta-trefoil fold, found in Saccharomyces cerevisiae ...
179-374 7.15e-50

MIR domain, beta-trefoil fold, found in Saccharomyces cerevisiae dolichyl-phosphate-mannose--protein mannosyltransferase 2 (PMT2) and similar proteins; Dolichyl-phosphate-mannose-protein mannosyltransferases (EC 2.4.1.109), also called PMTs, are responsible for O-linked glycosylation of proteins. They catalyze the transfer of mannose to seryl and threonyl residues of secretory proteins. Protein O-glycosylation is essential for cell wall rigidity and cell integrity. In Saccharomyces cerevisiae, a family of protein mannosyltransferases coded for by seven genes (PMT1-7). The family includes PMT2, PMT3 and PMT6. PMT2 forms a heterodimeric complex with PMT1 and more rarely with PMT5. The PMT1-PMT2 complex participates in oxidative protein folding, ER-associated protein degradation (ERAD), as well as ER export. It is required for incorporation of proteins in the cell wall. PMT3 form a functional heterodimer with PMT5 and more rarely with PMT1. It may have redundant activity to PMT2. PMT6 may form a heterodimer with PMT4. Members in this family contain a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


Pssm-ID: 467755 [Multi-domain]  Cd Length: 192  Bit Score: 171.73  E-value: 7.15e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 179 PLEVAYGSQVTLKNVfgKPVPCWLHSHQSTYPmiyengrGSSHQQQVTCYPFKDVNNWWIVKDPGRHQLVVNN--PPRPV 256
Cdd:cd23284     1 PLDVAYGSKVTIKNQ--GLGGGLLHSHVQTYP-------EGSNQQQVTCYGHKDSNNEWIFERPRGLPSWDENdtDIEFI 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 257 RHGDVVQLVHGMTTRFLNTHDVAAPLSPHSQEVSCYVDYNISMPSQNlWRLDIVNRES--DTEVWKTILSEVRLVHVNTS 334
Cdd:cd23284    72 KDGDIVRLVHKQTGRNLHSHPVPAPISKSDYEVSGYGDLTVGDEKDN-WVIEIVKQVGseDPKKLHTLTTSFRLRHEVLG 150
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1952781897 335 AVLKLSGAHLPDWGFQQLEVVGEKLSRGYHESMVWNVEEH 374
Cdd:cd23284   151 CYLAQTGVSLPEWGFKQGEVVCDKSNFKRDKRTWWNIETH 190
beta-trefoil_MIR_PMT1-like cd23283
MIR domain, beta-trefoil fold, found in Saccharomyces cerevisiae ...
182-373 1.03e-46

MIR domain, beta-trefoil fold, found in Saccharomyces cerevisiae dolichyl-phosphate-mannose--protein mannosyltransferase 1 (PMT1) and similar proteins; Dolichyl-phosphate-mannose-protein mannosyltransferases (EC 2.4.1.109), also called PMTs, are responsible for O-linked glycosylation of proteins. They catalyze the transfer of mannose to seryl and threonyl residues of secretory proteins. Protein O-glycosylation is essential for cell wall rigidity and cell integrity. In Saccharomyces cerevisiae, a family of protein mannosyltransferases coded for by seven genes (PMT1-7). The family includes PMT1 and PMT5. PMT1 forms a heterodimeric complex with PMT2 and more rarely with PMT5. The PMT1-PMT2 complex participates in oxidative protein folding, ER-associated protein degradation (ERAD), as well as ER export. It is required for incorporation of proteins in the cell wall. PMT5 form a functional heterodimer with PMT3 and more rarely with PMT1. Members in this family contain a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


Pssm-ID: 467754 [Multi-domain]  Cd Length: 190  Bit Score: 163.24  E-value: 1.03e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 182 VAYGSQVTLKNVfgKPVPCWLHSHQSTYPmiyengrGSSHQQQVTCYPFKDVNNWWIVKDPGRHQLVVNNPPRPVRHGDV 261
Cdd:cd23283     1 VAYGSTIRIRHL--NTRGGYLHSHPHNYP-------AGSKQQQITLYPHRDENNDWLVELANAPEEWSPTTFENLKDGDV 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 262 VQLVHGMTTRFLNTHDVAAPLS--PHSQEVSCYVDYNISMPSQNLWRLDIVNRESDTEV----WKTILSEVRLVHVNTSA 335
Cdd:cd23283    72 VRLEHVATGRRLHSHDHRPPVSdnDWQNEVSAYGYEGFEGDANDDWRVEILKDDSRPGEskerVRAIDTKFRLVHVMTGC 151
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1952781897 336 VLKLSGAHLPDWGFQQLEVVGEKlsRGYHESMVWNVEE 373
Cdd:cd23283   152 YLFSHGVKLPEWGFEQQEVTCAK--SGLLELSLWYIET 187
beta-trefoil_MIR_POMT2 cd23282
MIR domain, beta-trefoil fold, found in protein O-mannosyl-transferase 2 (POMT2) and similar ...
182-376 2.68e-44

MIR domain, beta-trefoil fold, found in protein O-mannosyl-transferase 2 (POMT2) and similar proteins; POMT2 (EC 2.4.1.109), also called dolichyl-phosphate-mannose--protein mannosyltransferase 2, is a novel member of the PMT protein O-mannosyltransferase family specifically localized to the acrosome of mammalian spermatids. POMT2 transfers mannosyl residues to the hydroxyl group of serine or threonine residues. Coexpression of both POMT1 and POMT2 is necessary for enzyme activity, expression of either POMT1 or POMT2 alone is insufficient. It is essentially dedicated to O-mannosylation of alpha-DAG1 and few other proteins but not of cadherins and protocaherins. POMT2 contains a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


Pssm-ID: 467753 [Multi-domain]  Cd Length: 183  Bit Score: 156.31  E-value: 2.68e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 182 VAYGSQVTLKN--VFGKpvpcWLHSHQSTYPmiyeNGRGSsHQQQVTCYPFKDVNNWWIVKDPGRHQLVvNNPPRPVRHG 259
Cdd:cd23282     1 VAYGSVITLKNhrTGGG----YLHSHWHLYP----EGVGA-RQQQVTTYSHKDDNNLWLIKKHNQSSDL-SDPVEYVRHG 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 260 DVVQLVHGMTTRFLNTHDVAAPLSPHSQEVSCYV-----DYNismpsqNLWRLDIVNRESDtEVWKTILSEVRLVHVNTS 334
Cdd:cd23282    71 DLIRLEHVNTKRNLHSHKEKAPLTKKHYQVTGYGengtgDAN------DVWRVEVVGGREG-DPVKTVRSKFRLVHYNTG 143
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1952781897 335 AVLKLSGAHLPDWGFQQLEVVGEKLSRgyHESMVWNVEEHRY 376
Cdd:cd23282   144 CALHSHGKQLPKWGWEQLEVTCNPNVR--DKNSLWNVEDNRN 183
PMT pfam02366
Dolichyl-phosphate-mannose-protein mannosyltransferase; This is a family of ...
1-150 8.92e-41

Dolichyl-phosphate-mannose-protein mannosyltransferase; This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is the Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as Swiss:O52327 are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.


Pssm-ID: 396786 [Multi-domain]  Cd Length: 245  Bit Score: 148.61  E-value: 8.92e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897   1 MAYQILLELGFSHCAAMGAALLMLIENALITQSRLMLLESVLIFFNLLAVLSYLKFsnsQKHRPFSLSWWFWLMLTGVAC 80
Cdd:pfam02366  99 LVYLTAKRLGFSKNTALLAALLVILENSFITLSRYILLDSPLLFFTTLSMYCFWKF---ERKAPFSRKWWLWLLLTGIAL 175
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897  81 SCAVGVKYMGIFTYLLVLAVASVHAWHLIGDQTLSNVCVLCHLLARAAALLVIPTLMYLLFFYVHLILVY 150
Cdd:pfam02366 176 GLALSTKGVGLFTVLPVGLLTIWHLWQLLGDLSLLLKSIWKHLFARLFCLIVIPWALYLAQFYVHFWLLF 245
beta-trefoil_MIR_PMT7-like cd23286
MIR domain, beta-trefoil fold, found in Saccharomyces cerevisiae ...
182-355 1.20e-28

MIR domain, beta-trefoil fold, found in Saccharomyces cerevisiae dolichyl-phosphate-mannose--protein mannosyltransferase 7 (PMT7) and similar proteins; Dolichyl-phosphate-mannose-protein mannosyltransferases (EC 2.4.1.109), also called PMTs, are responsible for O-linked glycosylation of proteins. They catalyze the transfer of mannose to seryl and threonyl residues of secretory proteins. Protein O-glycosylation is essential for cell wall rigidity and cell integrity. In Saccharomyces cerevisiae, a family of protein mannosyltransferases coded for by seven genes (PMT1-7). The family includes PMT7. Members in this family contain a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


Pssm-ID: 467757 [Multi-domain]  Cd Length: 192  Bit Score: 112.91  E-value: 1.20e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 182 VAYGSQVTLKNVFGkpVPCWLHSHQSTYPmiyengrGSSHQQQVTCYPFK-DVNNWWIVKDPGRHQLV-VNNPPRPVRHG 259
Cdd:cd23286     1 LLYGSTVTIRHLES--LGGYLHSHDLTYP-------SGSNEQQVTLYDFEdDANNEWIIETKTKEQMDkFPGQFREVRDG 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 260 DVVQLVHGMTTRFLNTHDVAAPLSPH--SQEVSCYVDYNISMPSQNLWRLDIVNRESDTEVW------KTILSEVRLVHV 331
Cdd:cd23286    72 DVIRLRHVVTGKLLRASNARPPVSEQeyNNEVSCTGNANYSGDMDENWRIDVKGDESHAELKlpnikiKSTESVFQLYNR 151
                         170       180
                  ....*....|....*....|....
gi 1952781897 332 NTSAVLKLSGAHLPDWGFQQLEVV 355
Cdd:cd23286   152 GTGCTLLSHDTRLPDWAFHQQEVL 175
beta-trefoil_MIR_SDF2-like cd23279
MIR domain, beta-trefoil fold, found in family of stromal cell-derived factor 2 (SDF-2); The ...
184-357 2.69e-21

MIR domain, beta-trefoil fold, found in family of stromal cell-derived factor 2 (SDF-2); The SDF-2 family includes mammalian SDF-2 and SDF2-like protein 1 (SDF2L1) as well as similar proteins from plant, such as Arabidopsis thaliana stromal cell-derived factor 2-like protein (AtSDF2). SDF-2 is a secretory protein involved in multiple endoplasmic reticulum (ER) functions, including the misfolded protein catabolic process, protein glycosylation, and ER protein quality control. SDF2L1, also called PWP1-interacting protein 8, is an endoplasmic reticulum (ER)-localized protein that plays a role in ER-associated degradation (ERAD) of misfolded proinsulin in pancreatic beta-cells. It is a component of the endoplasmic reticulum (ER) chaperone complex and interacts with alpha- and beta-defensins. SDF2L1 may also act as a tumor suppressor that play an important role in a variety of cancers, such as breast cancer and ovarian cancer. AtSDF2, also called SDF2-like protein, acts as crucial component of the unfolded protein response (UPR) in Arabidopsis thaliana. It is involved in the endoplasmic reticulum (ER) protein quality control and unfolded protein response. It may be involved in the quality control of glycoproteins. AtSDF2 forms a complex in the ER with ERDJ3B and MED37A/BIP1 which is required for the proper accumulation and function of the surface-exposed leucine-rich repeat receptor kinases EFR involved in pathogen-associated molecular pattern (PAMP) triggered immunity. Members in this family contain a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


Pssm-ID: 467750 [Multi-domain]  Cd Length: 173  Bit Score: 91.21  E-value: 2.69e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 184 YGSQVTLKNVFGKpvpCWLHSHQSTYpmiyenGRGSShQQQVTCYP-FKDVNNWWIVK----DPGRHQlvvnnpPRPVRH 258
Cdd:cd23279     1 YGSAIKLKHVNSG---YRLHSHEVSY------GSGSG-QQSVTAVPsADDANSLWTVLpglgEPCQEQ------GKPVKC 64
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 259 GDVVQLVHGMTTRFLNTHDVAAPLSPHsQEVSCYVDynISMPSQNLWRLDIVNreSDTEVWKtILSEVRLVHVNTSAVLK 338
Cdd:cd23279    65 GDIIRLQHVNTRKNLHSHNHSSPLSGN-QEVSAFGG--GDEDSGDNWIVECEG--KKAKFWK-RGEPVRLKHVDTGKYLS 138
                         170
                  ....*....|....*....
gi 1952781897 339 LSGAHLpdwgFQQLEVVGE 357
Cdd:cd23279   139 ASKTHK----FTQQPIAGQ 153
beta-trefoil_MIR_AtSDF2-like cd23294
MIR domain, beta-trefoil fold, found in Arabidopsis thaliana stromal cell-derived factor ...
182-376 1.15e-18

MIR domain, beta-trefoil fold, found in Arabidopsis thaliana stromal cell-derived factor 2-like protein (AtSDF2) and similar proteins; AtSDF2, also called SDF2-like protein, acts as a crucial component of the unfolded protein response (UPR) in Arabidopsis thaliana. It is involved in the endoplasmic reticulum (ER) protein quality control and unfolded protein response. It may be involved in the quality control of glycoproteins. AtSDF2 forms a complex in the ER with ERDJ3B and MED37A/BIP1 which is required for the proper accumulation and function of the surface-exposed leucine-rich repeat receptor kinases EFR involved in pathogen-associated molecular pattern (PAMP) triggered immunity. AtSDF2 contains a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


Pssm-ID: 467765 [Multi-domain]  Cd Length: 176  Bit Score: 83.96  E-value: 1.15e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 182 VAYGSQVTLKNVfgkPVPCWLHSHQSTYpmiyenGRGSShQQQVTCYPFK-DVNNWWIVKDPGRHQLVvnnPPRPVRHGD 260
Cdd:cd23294     1 VTCGSVIKLQHE---RTKFRLHSHEVPY------GSGSG-QQSVTGFPGVdDSNSYWIVKPANGERCK---QGDVIKNGD 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 261 VVQLVHGMTTRFLNTHDVAAPLSpHSQEVSCYVDYNISMPSQNlWRLDIvnrESDTEVWKtiLSE-VRLVHVNTSAVLkl 339
Cdd:cd23294    68 VIRLQHVSTRKWLHSHLHASPLS-GNQEVSCFGGDGNSDTGDN-WIVEI---EGGGKVWE--RDQkVRLKHVDTGGYL-- 138
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1952781897 340 sgaHLPDWGFQ-----QLEVVGeklSRGYHESMVWNVEEHRY 376
Cdd:cd23294   139 ---HSHDKKYGrpipgQQEVCA---VASKNSNTLWLAAEGVY 174
beta-trefoil_MIR cd23263
MIR domain, beta-trefoil fold, found in the MIR (protein mannosyltransferase, IP3R and RyR) ...
185-358 1.55e-17

MIR domain, beta-trefoil fold, found in the MIR (protein mannosyltransferase, IP3R and RyR) superfamily; The MIR superfamily includes dolichyl-phosphate-mannose-protein mannosyltransferases (PMTs), inositol 1,4,5-trisphosphate receptors (ITPRs/IP3R), ryanodine receptors (RyRs), and stromal cell-derived factor 2 (SDF-2)-like proteins. They all contain a MIR domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. The MIR domain may have a ligand transferase function.


Pssm-ID: 467746 [Multi-domain]  Cd Length: 172  Bit Score: 80.51  E-value: 1.55e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 185 GSQVTLKNVFgkpVPCWLHSHQSTYPMiyengrgSSHQQQVTCY---PFKDVNNWWIVkdpgrhQLVVNNPPRPVRHGDV 261
Cdd:cd23263     1 GDVIWLKHSE---TGKYLHSHRKNYPT-------GSGQQEVTFEsssRKGDTNGLWII------ESENGKQGGPVKWGDK 64
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 262 VQLVHGMTTRFLNTHDVAAPLSPHSQEVSCYVDYNismPSQNLWRLDIVNRESDTEVWKTILSEVRLVHVNTSAVLKLSG 341
Cdd:cd23263    65 IRLRHLSTGKYLSSEEGKKSPKSNHQEVLCLTDNP---DKSSLFKFEPIGSTKYKQKYVKKDSYFRLKHVNTNFWLHSHE 141
                         170
                  ....*....|....*..
gi 1952781897 342 AHLPDWGFQQLEVVGEK 358
Cdd:cd23263   142 KKFNINNKTQQEVICHG 158
MIR pfam02815
MIR domain; The MIR (protein mannosyltransferase, IP3R and RyR) domain is a domain that may ...
193-355 9.17e-17

MIR domain; The MIR (protein mannosyltransferase, IP3R and RyR) domain is a domain that may have a ligand transferase function.


Pssm-ID: 397103 [Multi-domain]  Cd Length: 185  Bit Score: 78.56  E-value: 9.17e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 193 VFGKPVPCWLHSHQSTYPMIYENGRGSsHQQQVTCYPFKDVNN----WWIVkdpgrhqLVVNNPP---RPVRHGDVVQLV 265
Cdd:pfam02815   3 LKGGDVVRLFHSHQDEYLTGSEQQQKQ-PFLRITLYPHGDANNsarsLWRI-------EVVRHDAwrgGLIKWGSPFRLR 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 266 HGMTTRFLNTHDV-AAPLSPHS---QEVSCYvDYNISM----PSQNLWRLDIVNRESDTEvwKTILSEVRLVHVNTSAVL 337
Cdd:pfam02815  75 HLTTGRYLHSHEEqKPPLVEKEdwqKEVSAY-GFRGFPgdndIVEIFEKKSTTGMGSDRI--KPGDSYFRLQHVCTGCWL 151
                         170       180
                  ....*....|....*....|
gi 1952781897 338 KLSGAHLPDWGF--QQLEVV 355
Cdd:pfam02815 152 FSHSVKLPKWGFgpEQQKVT 171
beta-trefoil_MIR_SDF2_meta cd23293
MIR domain, beta-trefoil fold, found in family of metazoan stromal cell-derived factor 2 ...
202-356 8.18e-16

MIR domain, beta-trefoil fold, found in family of metazoan stromal cell-derived factor 2 (SDF-2); The metazoan SDF-2 family includes SDF-2 and SDF2-like protein 1 (SDF2L1). SDF-2 is a secretory protein involved in multiple endoplasmic reticulum (ER) functions, including the misfolded protein catabolic process, protein glycosylation, and ER protein quality control. SDF2L1, also called PWP1-interacting protein 8, is an endoplasmic reticulum (ER)-localized protein that plays a role in ER-associated degradation (ERAD) of misfolded proinsulin in pancreatic beta-cells. It is a component of the endoplasmic reticulum (ER) chaperone complex and interacts with alpha- and beta-defensins. SDF2L1 may also act as a tumor suppressor that play an important role in a variety of cancers, such as breast cancer and ovarian cancer. Members in this family contain a MIR (protein mannosyltransferase, IP3R and RyR) domain with beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.


Pssm-ID: 467764 [Multi-domain]  Cd Length: 175  Bit Score: 75.77  E-value: 8.18e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 202 LHSHQSTYpmiyenGRGSShQQQVTCYPFK-DVNNWWIVKdpGRHQLVVNNPpRPVRHGDVVQLVHGMTTRFLNTHDVAA 280
Cdd:cd23293    18 LHSHDVKY------GSGSG-QQSVTGVESSdDSNSYWQIR--GPTGADCERG-TPIKCGQTIRLTHLNTGKNLHSHHFQS 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 281 PLSpHSQEVSCYVDynismpsqnlwrldivNRESDT-EVWKTILS--------EVRLVHVNTSAVLKLSGAHL--PDWGf 349
Cdd:cd23293    88 PLS-GNQEVSAFGE----------------DGEGDTgDNWTVVCSgtywerdeAVRLKHVDTEVYLHVTGEQYgrPIHG- 149

                  ....*..
gi 1952781897 350 qQLEVVG 356
Cdd:cd23293   150 -QREVSG 155
PMT1 COG1928
Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, ...
407-631 2.36e-09

Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441531 [Multi-domain]  Cd Length: 495  Bit Score: 59.91  E-value: 2.36e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 407 FLELQWRMLT-AKSDDSEHKYSSSPLDWVTLDTSIAYWLH-----------PRTSAQIHLLGNIVIWASASLAMVVyvlL 474
Cdd:COG1928   307 LWHYHQQILSfHTGLSSPHPYESKPWSWPLMLRPVSYYYEtgqtgtlgcgaGKCVRAVLAIGNPALWWLGLPALLW---L 383
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 475 FFWYLLRRrrsicdipeetkccrciptlleassgkckdqagiavtpgySWlrwvLAGALCAgGWAVNYLPFFM-MEKTLF 553
Cdd:COG1928   384 LWRWIARR----------------------------------------DW----RAGAVLV-GYAAGWLPWFLyLDRTMF 418
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897 554 LYHYLPALTFQILLLPVVLQHV---SDHLCRSQLLR---SLFSALVVAwyscachVFNTLRPLTYGDkSLSPSELKALRW 627
Cdd:COG1928   419 FFYAIPFVPFLVLALALVLGLIlgpARASERRRLGRlvvGLYVGLVVA-------NFAFFYPILTGL-PIPYDEWQARMW 490

                  ....
gi 1952781897 628 KDSW 631
Cdd:COG1928   491 FPSW 494
MIR smart00472
Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases;
182-239 9.23e-07

Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases;


Pssm-ID: 197746 [Multi-domain]  Cd Length: 57  Bit Score: 46.18  E-value: 9.23e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897  182 VAYGSQVTLKNVFGkpvPCWLHSHQSTYPMIyengrgSSHQQQVTCYPFK--DVNNWWIV 239
Cdd:smart00472   4 VRWGDVVRLRHVTT---GRYLHSHDEKLPPW------GDGQQEVTGYGNPaiDANTLWLI 54
MIR smart00472
Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases;
253-310 2.38e-05

Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases;


Pssm-ID: 197746 [Multi-domain]  Cd Length: 57  Bit Score: 42.33  E-value: 2.38e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1952781897  253 PRPVRHGDVVQLVHGMTTRFLNTHDVA-APLSPHSQEVSCYVDYNISmpSQNLWRLDIV 310
Cdd:smart00472   1 GGFVRWGDVVRLRHVTTGRYLHSHDEKlPPWGDGQQEVTGYGNPAID--ANTLWLIEPV 57
MIR smart00472
Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases;
324-374 2.81e-05

Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases;


Pssm-ID: 197746 [Multi-domain]  Cd Length: 57  Bit Score: 41.94  E-value: 2.81e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1952781897  324 SEVRLVHVNTSAVLKLSGAHLPDWGFQQLEVVGEKLSRGyHESMVWNVEEH 374
Cdd:smart00472   8 DVVRLRHVTTGRYLHSHDEKLPPWGDGQQEVTGYGNPAI-DANTLWLIEPV 57
ArnT COG1807
PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA ...
15-101 1.60e-03

PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441412 [Multi-domain]  Cd Length: 309  Bit Score: 41.15  E-value: 1.60e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1952781897  15 AAMGAALLMLIENALITQSRLMLLESVLIFFNLLAVLSYLKFSNSQKhrpfslswWFWLMLTGVACSCAVGVKYMGIFTY 94
Cdd:COG1807   113 AALLAALLLLTSPLLLLFGRLATPDALLLLFWTLALYALLRALERRR--------LRWLLLAGLALGLGFLTKGPVALLL 184

                  ....*..
gi 1952781897  95 LLVLAVA 101
Cdd:COG1807   185 PGLALLL 191
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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