centrosomal protein of 76 kDa isoform X8 [Rattus norvegicus]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| CEP76-C2 super family | cl21421 | CEP76 C2 domain; Many ciliary proteins are involved in ciliogenesis and implicated for ... |
22-43 | 1.54e-03 | ||
CEP76 C2 domain; Many ciliary proteins are involved in ciliogenesis and implicated for ciliophathies. A recent study has shown that many of them contain various new versions of C2 domains which are predicted to mediate membrane localizations for Y-shaped linkers of transition zone of cilia. This is the new C2 domain that is contained by ciliary CEP76 proteins. The actual alignment was detected with superfamily member pfam15627: Pssm-ID: 464781 Cd Length: 157 Bit Score: 39.24 E-value: 1.54e-03
|
||||||
| Transglut_core super family | cl17362 | Transglutaminase-like superfamily; This family includes animal transglutaminases and other ... |
159-196 | 6.75e-03 | ||
Transglutaminase-like superfamily; This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease. The actual alignment was detected with superfamily member pfam01841: Pssm-ID: 450180 [Multi-domain] Cd Length: 108 Bit Score: 36.23 E-value: 6.75e-03
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| CEP76-C2 | pfam15627 | CEP76 C2 domain; Many ciliary proteins are involved in ciliogenesis and implicated for ... |
22-43 | 1.54e-03 | ||
CEP76 C2 domain; Many ciliary proteins are involved in ciliogenesis and implicated for ciliophathies. A recent study has shown that many of them contain various new versions of C2 domains which are predicted to mediate membrane localizations for Y-shaped linkers of transition zone of cilia. This is the new C2 domain that is contained by ciliary CEP76 proteins. Pssm-ID: 464781 Cd Length: 157 Bit Score: 39.24 E-value: 1.54e-03
|
||||||
| Transglut_core | pfam01841 | Transglutaminase-like superfamily; This family includes animal transglutaminases and other ... |
159-196 | 6.75e-03 | ||
Transglutaminase-like superfamily; This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease. Pssm-ID: 376628 [Multi-domain] Cd Length: 108 Bit Score: 36.23 E-value: 6.75e-03
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| CEP76-C2 | pfam15627 | CEP76 C2 domain; Many ciliary proteins are involved in ciliogenesis and implicated for ... |
22-43 | 1.54e-03 | ||
CEP76 C2 domain; Many ciliary proteins are involved in ciliogenesis and implicated for ciliophathies. A recent study has shown that many of them contain various new versions of C2 domains which are predicted to mediate membrane localizations for Y-shaped linkers of transition zone of cilia. This is the new C2 domain that is contained by ciliary CEP76 proteins. Pssm-ID: 464781 Cd Length: 157 Bit Score: 39.24 E-value: 1.54e-03
|
||||||
| Transglut_core | pfam01841 | Transglutaminase-like superfamily; This family includes animal transglutaminases and other ... |
159-196 | 6.75e-03 | ||
Transglutaminase-like superfamily; This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease. Pssm-ID: 376628 [Multi-domain] Cd Length: 108 Bit Score: 36.23 E-value: 6.75e-03
|
||||||
| Blast search parameters | ||||
|
