plakophilin-4 isoform X13 [Rattus norvegicus]
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
590-629 | 5.32e-09 | ||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. : Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 52.84 E-value: 5.32e-09
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
896-931 | 4.40e-07 | ||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. : Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 47.42 E-value: 4.40e-07
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
634-675 | 4.58e-07 | ||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. : Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 47.42 E-value: 4.58e-07
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PLN03200 super family | cl33659 | cellulose synthase-interactive protein; Provisional |
879-1000 | 1.13e-03 | ||||
cellulose synthase-interactive protein; Provisional The actual alignment was detected with superfamily member PLN03200: Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 43.55 E-value: 1.13e-03
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PLN03209 super family | cl25752 | translocon at the inner envelope of chloroplast subunit 62; Provisional |
236-393 | 2.05e-03 | ||||
translocon at the inner envelope of chloroplast subunit 62; Provisional The actual alignment was detected with superfamily member PLN03209: Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 42.22 E-value: 2.05e-03
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
980-1024 | 3.64e-03 | ||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. : Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 36.25 E-value: 3.64e-03
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Name | Accession | Description | Interval | E-value | ||||
Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
590-629 | 5.32e-09 | ||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 52.84 E-value: 5.32e-09
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
590-630 | 7.93e-09 | ||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 52.43 E-value: 7.93e-09
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
896-931 | 4.40e-07 | ||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 47.42 E-value: 4.40e-07
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
634-675 | 4.58e-07 | ||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 47.42 E-value: 4.58e-07
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
634-675 | 2.12e-06 | ||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 45.52 E-value: 2.12e-06
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HEAT | COG1413 | HEAT repeat [General function prediction only]; |
557-679 | 1.96e-04 | ||||
HEAT repeat [General function prediction only]; Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 42.69 E-value: 1.96e-04
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
896-931 | 2.53e-04 | ||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 39.36 E-value: 2.53e-04
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PLN03200 | PLN03200 | cellulose synthase-interactive protein; Provisional |
879-1000 | 1.13e-03 | ||||
cellulose synthase-interactive protein; Provisional Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 43.55 E-value: 1.13e-03
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PLN03209 | PLN03209 | translocon at the inner envelope of chloroplast subunit 62; Provisional |
236-393 | 2.05e-03 | ||||
translocon at the inner envelope of chloroplast subunit 62; Provisional Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 42.22 E-value: 2.05e-03
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
980-1024 | 3.64e-03 | ||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 36.25 E-value: 3.64e-03
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PLN03200 | PLN03200 | cellulose synthase-interactive protein; Provisional |
561-675 | 5.87e-03 | ||||
cellulose synthase-interactive protein; Provisional Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 41.24 E-value: 5.87e-03
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Name | Accession | Description | Interval | E-value | ||||
Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
590-629 | 5.32e-09 | ||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 52.84 E-value: 5.32e-09
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
590-630 | 7.93e-09 | ||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 52.43 E-value: 7.93e-09
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
896-931 | 4.40e-07 | ||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 47.42 E-value: 4.40e-07
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
634-675 | 4.58e-07 | ||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 47.42 E-value: 4.58e-07
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
634-675 | 2.12e-06 | ||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 45.52 E-value: 2.12e-06
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HEAT | COG1413 | HEAT repeat [General function prediction only]; |
557-679 | 1.96e-04 | ||||
HEAT repeat [General function prediction only]; Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 42.69 E-value: 1.96e-04
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Arm | pfam00514 | Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
896-931 | 2.53e-04 | ||||
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats. Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 39.36 E-value: 2.53e-04
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PLN03200 | PLN03200 | cellulose synthase-interactive protein; Provisional |
879-1000 | 1.13e-03 | ||||
cellulose synthase-interactive protein; Provisional Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 43.55 E-value: 1.13e-03
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PLN03209 | PLN03209 | translocon at the inner envelope of chloroplast subunit 62; Provisional |
236-393 | 2.05e-03 | ||||
translocon at the inner envelope of chloroplast subunit 62; Provisional Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 42.22 E-value: 2.05e-03
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ARM | smart00185 | Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
980-1024 | 3.64e-03 | ||||
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin. Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 36.25 E-value: 3.64e-03
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PLN03200 | PLN03200 | cellulose synthase-interactive protein; Provisional |
561-675 | 5.87e-03 | ||||
cellulose synthase-interactive protein; Provisional Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 41.24 E-value: 5.87e-03
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Blast search parameters | ||||
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