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Conserved domains on  [gi|1958781774|ref|XP_038967662|]
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A-kinase anchor protein 5 isoform X1 [Rattus norvegicus]

Protein Classification

WSK domain-containing protein( domain architecture ID 10510880)

WSK domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PTZ00121 super family cl31754
MAEBL; Provisional
 282-655 6.85e-10

MAEBL; Provisional


The actual alignment was detected with superfamily member PTZ00121:

Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 62.85  E-value: 6.85e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  282 SDSIRESAPSGKDDGRRKTAAEEKKSGETALGQAEEASSVSQADKsvlsQAEEATVGHTEEATVIQAQSQAKEGKLSQ-- 359
Cdd:PTZ00121  1446 ADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKK----KAEEAKKKADEAKKAAEAKKKADEAKKAEea 1521

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  360 --AEEATVAQAKETV--LSQAEEVKLSQIEEPAISQAKKATVGQAKEAivSQAEEAIVGHTEKA-TMGQAEEATVGHIEK 434
Cdd:PTZ00121  1522 kkADEAKKAEEAKKAdeAKKAEEKKKADELKKAEELKKAEEKKKAEEA--KKAEEDKNMALRKAeEAKKAEEARIEEVMK 1599

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  435 TTvgqaEEATVGQAEEATvgQAEEATVgQAEEATVGQAEEATVGQAGEATVSHIEKT-TVGQAEEAIVGQAEEatVGQAE 513
Cdd:PTZ00121  1600 LY----EEEKKMKAEEAK--KAEEAKI-KAEELKKAEEEKKKVEQLKKKEAEEKKKAeELKKAEEENKIKAAE--EAKKA 1670

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  514 EATVGQAEEAtvgQAEEATVDQAEEATVGQAEEATvgQAGEAAVGQAEEaiVAQAEEatVGQAGEATVGQAEKATVGQAE 593
Cdd:PTZ00121  1671 EEDKKKAEEA---KKAEEDEKKAAEALKKEAEEAK--KAEELKKKEAEE--KKKAEE--LKKAEEENKIKAEEAKKEAEE 1741

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958781774  594 EPivGQAEETVLRHASDLKVNGVDAEKPRSEESKRMEPIAIIitDTEISEFDVKKSKNVPKQ 655
Cdd:PTZ00121  1742 DK--KKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVI--EEELDEEDEKRRMEVDKK 1799
WSK pfam03832
WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in ...
 79-107 2.28e-07

WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in protein kinase A anchoring proteins.


:

Pssm-ID: 461069 [Multi-domain]  Cd Length: 29  Bit Score: 47.25  E-value: 2.28e-07
                          10        20
                  ....*....|....*....|....*....
gi 1958781774  79 QPAGAWASIKRLVTHRKPSESAEKQKPSE 107
Cdd:pfam03832   1 EPVSAWASFKRLVTPRKRSKSSKEQKPEE 29
 
Name Accession Description Interval E-value
PTZ00121 PTZ00121
MAEBL; Provisional
 282-655 6.85e-10

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 62.85  E-value: 6.85e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  282 SDSIRESAPSGKDDGRRKTAAEEKKSGETALGQAEEASSVSQADKsvlsQAEEATVGHTEEATVIQAQSQAKEGKLSQ-- 359
Cdd:PTZ00121  1446 ADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKK----KAEEAKKKADEAKKAAEAKKKADEAKKAEea 1521

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  360 --AEEATVAQAKETV--LSQAEEVKLSQIEEPAISQAKKATVGQAKEAivSQAEEAIVGHTEKA-TMGQAEEATVGHIEK 434
Cdd:PTZ00121  1522 kkADEAKKAEEAKKAdeAKKAEEKKKADELKKAEELKKAEEKKKAEEA--KKAEEDKNMALRKAeEAKKAEEARIEEVMK 1599

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  435 TTvgqaEEATVGQAEEATvgQAEEATVgQAEEATVGQAEEATVGQAGEATVSHIEKT-TVGQAEEAIVGQAEEatVGQAE 513
Cdd:PTZ00121  1600 LY----EEEKKMKAEEAK--KAEEAKI-KAEELKKAEEEKKKVEQLKKKEAEEKKKAeELKKAEEENKIKAAE--EAKKA 1670

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  514 EATVGQAEEAtvgQAEEATVDQAEEATVGQAEEATvgQAGEAAVGQAEEaiVAQAEEatVGQAGEATVGQAEKATVGQAE 593
Cdd:PTZ00121  1671 EEDKKKAEEA---KKAEEDEKKAAEALKKEAEEAK--KAEELKKKEAEE--KKKAEE--LKKAEEENKIKAEEAKKEAEE 1741

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958781774  594 EPivGQAEETVLRHASDLKVNGVDAEKPRSEESKRMEPIAIIitDTEISEFDVKKSKNVPKQ 655
Cdd:PTZ00121  1742 DK--KKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVI--EEELDEEDEKRRMEVDKK 1799
WSK pfam03832
WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in ...
 79-107 2.28e-07

WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in protein kinase A anchoring proteins.


Pssm-ID: 461069 [Multi-domain]  Cd Length: 29  Bit Score: 47.25  E-value: 2.28e-07
                          10        20
                  ....*....|....*....|....*....
gi 1958781774  79 QPAGAWASIKRLVTHRKPSESAEKQKPSE 107
Cdd:pfam03832   1 EPVSAWASFKRLVTPRKRSKSSKEQKPEE 29
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 293-608 4.23e-05

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 47.24  E-value: 4.23e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 293 KDDGRRKTAAEEKKSGETALGQAEEASSVSQADKSVLSQAEEATVGHTEEATVIQAQSQAKEGKLSQAEEatvAQAKETV 372
Cdd:COG1196   233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQ---DIARLEE 309

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 373 LSQAEEVKLSQIEEpaiSQAKKATVGQAKEAIVSQAEEAIVGHTEKATMGQAEEATVGHIEKTTVGQAEEAtVGQAEEAT 452
Cdd:COG1196   310 RRRELEERLEELEE---ELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA-EEELEELA 385

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 453 VGQAEEATVGQAEEATVGQAEEATVGQAGEATVSHIEKTTVGQAEEAIVGQAEEATVGQAEEATVGQAEEATVGQAEEAT 532
Cdd:COG1196   386 EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELL 465

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958781774 533 VDQAEEATVGQAEEATVGQAGEAAVGQAEEAIVAQAEEATVGQAGEATVGQAEKATVGQ--AEEPIVGQAEETVLRHA 608
Cdd:COG1196   466 AELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGavAVLIGVEAAYEAALEAA 543
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 391-630 5.04e-05

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 46.91  E-value: 5.04e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  391 QAKKATVGQAKEAIVSQAEEAIVGHTEkatmGQAEEATVGHIEKTTVGQAEEATVGQAEEATVGQAEEATVGQAEEATVG 470
Cdd:TIGR00927  648 EGERPTEAEGENGEESGGEAEQEGETE----TKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEA 723

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  471 QAE----EATVGQAGEATVSHIEKTTVGQAEEAIVGQAEEATVGQAEEATVGQAEEATVGQAEEATVDQAEEATVGQAEE 546
Cdd:TIGR00927  724 EGTedegEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEH 803

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  547 ATVGQAGEAAVGQAEEAIVAQAEEATvGQAGEATVGQAEKATVGQAEEPIVGQAEEtvlrhasdlkvNGVDAEKPRSEES 626
Cdd:TIGR00927  804 EGETEAGEKDEHEGQSETQADDTEVK-DETGEQELNAENQGEAKQDEKGVDGGGGS-----------DGGDSEEEEEEEE 871


                   ....
gi 1958781774  627 KRME 630
Cdd:TIGR00927  872 EEEE 875
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
 310-592 3.84e-03

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 40.76  E-value: 3.84e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  310 TALGQAEeASSVSQADKSVLSQAEEATVGHTEEATVIQAQSQAKegklSQAEEATVAQAKETVLSQAEEVKLSQIEEPAI 389
Cdd:NF033849   233 ANLGQSA-GTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSH----TTGHGSTRGWSHTQSTSESESTGQSSSVGTSE 307

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  390 SQAKKATVGQAkeAIVSQAEEAIVGHTEKATMGQAEEATVGHIEKTTVGQAEEATVGQAEEA--TVGQAEEATVGQAEEA 467
Cdd:NF033849   308 SQSHGTTEGTS--TTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHSESSSESTGTSVghSTSSSVSSSESSSRSS 385

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  468 TVGQAEEATVGQAGEATVSHIEKTTVGQAEEAIVGQAEEaTVGQAEEATVGQAEEATVGQAEEATVDQAEEATVGQAEEA 547
Cdd:NF033849   386 SSGVSGGFSGGIAGGGVTSEGLGASQGGSEGWGSGDSVQ-SVSQSYGSSSSTGTSSGHSDSSSHSTSSGQADSVSQGTSW 464

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*..
gi 1958781774  548 TVGQAGEA--AVGQAEEAIVAQAEEATVGQageaTVGQAEkaTVGQA 592
Cdd:NF033849   465 SEGTGTSQgqSVGTSESWSTSQSETDSVGD----STGTSE--SVSQG 505
 
Name Accession Description Interval E-value
PTZ00121 PTZ00121
MAEBL; Provisional
 282-655 6.85e-10

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 62.85  E-value: 6.85e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  282 SDSIRESAPSGKDDGRRKTAAEEKKSGETALGQAEEASSVSQADKsvlsQAEEATVGHTEEATVIQAQSQAKEGKLSQ-- 359
Cdd:PTZ00121  1446 ADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKK----KAEEAKKKADEAKKAAEAKKKADEAKKAEea 1521

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  360 --AEEATVAQAKETV--LSQAEEVKLSQIEEPAISQAKKATVGQAKEAivSQAEEAIVGHTEKA-TMGQAEEATVGHIEK 434
Cdd:PTZ00121  1522 kkADEAKKAEEAKKAdeAKKAEEKKKADELKKAEELKKAEEKKKAEEA--KKAEEDKNMALRKAeEAKKAEEARIEEVMK 1599

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  435 TTvgqaEEATVGQAEEATvgQAEEATVgQAEEATVGQAEEATVGQAGEATVSHIEKT-TVGQAEEAIVGQAEEatVGQAE 513
Cdd:PTZ00121  1600 LY----EEEKKMKAEEAK--KAEEAKI-KAEELKKAEEEKKKVEQLKKKEAEEKKKAeELKKAEEENKIKAAE--EAKKA 1670

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  514 EATVGQAEEAtvgQAEEATVDQAEEATVGQAEEATvgQAGEAAVGQAEEaiVAQAEEatVGQAGEATVGQAEKATVGQAE 593
Cdd:PTZ00121  1671 EEDKKKAEEA---KKAEEDEKKAAEALKKEAEEAK--KAEELKKKEAEE--KKKAEE--LKKAEEENKIKAEEAKKEAEE 1741

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958781774  594 EPivGQAEETVLRHASDLKVNGVDAEKPRSEESKRMEPIAIIitDTEISEFDVKKSKNVPKQ 655
Cdd:PTZ00121  1742 DK--KKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVI--EEELDEEDEKRRMEVDKK 1799
WSK pfam03832
WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in ...
 79-107 2.28e-07

WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in protein kinase A anchoring proteins.


Pssm-ID: 461069 [Multi-domain]  Cd Length: 29  Bit Score: 47.25  E-value: 2.28e-07
                          10        20
                  ....*....|....*....|....*....
gi 1958781774  79 QPAGAWASIKRLVTHRKPSESAEKQKPSE 107
Cdd:pfam03832   1 EPVSAWASFKRLVTPRKRSKSSKEQKPEE 29
PTZ00121 PTZ00121
MAEBL; Provisional
 20-554 8.32e-07

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 52.84  E-value: 8.32e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774   20 KDEKRPEAASPQKERQERKTAtlcfkrrkKVNKKKAKAGSKTAEETKKHAPEAGGSGQRQPAGAWASIKRLVTHRKPSES 99
Cdd:PTZ00121  1297 KAEEKKKADEAKKKAEEAKKA--------DEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEA 1368

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  100 AEKQKpsEAEMQPEDGALPKKKTKSKLKIPCIRFSRGAKRSRPSKLTEDSgyvrvQGEADDLEIKAQIQPDEQATQAKST 179
Cdd:PTZ00121  1369 AEKKK--EEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAA-----KKKADEAKKKAEEKKKADEAKKKAE 1441

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  180 QGLQEDVMVRDGKEIQESHisnnvisgehviAIELELEKESSALRMRTPGSEKEAKVILVKQSVQVQQASVLENSAADSP 259
Cdd:PTZ00121  1442 EAKKADEAKKKAEEAKKAE------------EAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAK 1509

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  260 QPVTSTAPLSPAtthqlgleEPSDSIRESAPSGKDDGRRKtaAEEKKSGETA-----LGQAEEASSVSQADKS------V 328
Cdd:PTZ00121  1510 KKADEAKKAEEA--------KKADEAKKAEEAKKADEAKK--AEEKKKADELkkaeeLKKAEEKKKAEEAKKAeedknmA 1579

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  329 LSQAEEATvgHTEEATVIQAQSQAKEGKLSQAEEATVAQAKETvlsQAEEVKLSQIEEPAISQAKKATVGQAKEAIVSQA 408
Cdd:PTZ00121  1580 LRKAEEAK--KAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKI---KAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKK 1654

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  409 EEaivghtEKATMGQAEEATVGHIEKTtvgQAEEATVGQAEEAtvgQAEEATVGQAEEATvgQAEEatvgqageatVSHI 488
Cdd:PTZ00121  1655 AE------EENKIKAAEEAKKAEEDKK---KAEEAKKAEEDEK---KAAEALKKEAEEAK--KAEE----------LKKK 1710

                          490       500       510       520       530       540
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958781774  489 EKTTVGQAEEaiVGQAEEATVGQAEEATVGQAEEATvgQAEEATVDQAEEATVGQAEEATVGQAGE 554
Cdd:PTZ00121  1711 EAEEKKKAEE--LKKAEEENKIKAEEAKKEAEEDKK--KAEEAKKDEEEKKKIAHLKKEEEKKAEE 1772
rne PRK10811
ribonuclease E; Reviewed
 405-569 5.33e-06

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 50.04  E-value: 5.33e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  405 VSQAEEAIVGHTEKATMGQAEEATVghiEKTTVGQAEEATVGQAEEATVGQAEEATVGQAEEATVGQAEEATVGQAGEAT 484
Cdd:PRK10811   847 VVRPQDVQVEEQREAEEVQVQPVVA---EVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAP 923

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  485 VSH----IEKTTVGQAEEAIVgQAEEATVGQAEEATVGQAEEAT-VGQAEEATVDQAEEATVGQAEEATVGQAGEAAVGQ 559
Cdd:PRK10811   924 VTEqpqvITESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAeVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVA 1002

                          170
                   ....*....|
gi 1958781774  560 AEEAIVAQAE 569
Cdd:PRK10811  1003 PAQVPEATVE 1012
rne PRK10811
ribonuclease E; Reviewed
 437-614 1.74e-05

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 48.50  E-value: 1.74e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  437 VGQAEEATVGQAEEATVGQAEEATVgqaEEATVGQAEEATVGQAGEATVSHIEKTTVGQAEEAIVGQAEEATVGQAEEAT 516
Cdd:PRK10811   847 VVRPQDVQVEEQREAEEVQVQPVVA---EVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAP 923

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  517 VGQAEEATvgqaEEATVDQAEEATVgQAEEATVGQAGEAAVGQAEEAIVAQAEEATVGQAGEATVGQAEKATVgqAEEPI 596
Cdd:PRK10811   924 VTEQPQVI----TESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEV--ETVTA 996

                          170
                   ....*....|....*...
gi 1958781774  597 VGQAEETVLRHASDLKVN 614
Cdd:PRK10811   997 VEPEVAPAQVPEATVEHN 1014
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 293-608 4.23e-05

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 47.24  E-value: 4.23e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 293 KDDGRRKTAAEEKKSGETALGQAEEASSVSQADKSVLSQAEEATVGHTEEATVIQAQSQAKEGKLSQAEEatvAQAKETV 372
Cdd:COG1196   233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQ---DIARLEE 309

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 373 LSQAEEVKLSQIEEpaiSQAKKATVGQAKEAIVSQAEEAIVGHTEKATMGQAEEATVGHIEKTTVGQAEEAtVGQAEEAT 452
Cdd:COG1196   310 RRRELEERLEELEE---ELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA-EEELEELA 385

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 453 VGQAEEATVGQAEEATVGQAEEATVGQAGEATVSHIEKTTVGQAEEAIVGQAEEATVGQAEEATVGQAEEATVGQAEEAT 532
Cdd:COG1196   386 EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELL 465

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958781774 533 VDQAEEATVGQAEEATVGQAGEAAVGQAEEAIVAQAEEATVGQAGEATVGQAEKATVGQ--AEEPIVGQAEETVLRHA 608
Cdd:COG1196   466 AELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGavAVLIGVEAAYEAALEAA 543
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 391-630 5.04e-05

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 46.91  E-value: 5.04e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  391 QAKKATVGQAKEAIVSQAEEAIVGHTEkatmGQAEEATVGHIEKTTVGQAEEATVGQAEEATVGQAEEATVGQAEEATVG 470
Cdd:TIGR00927  648 EGERPTEAEGENGEESGGEAEQEGETE----TKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEA 723

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  471 QAE----EATVGQAGEATVSHIEKTTVGQAEEAIVGQAEEATVGQAEEATVGQAEEATVGQAEEATVDQAEEATVGQAEE 546
Cdd:TIGR00927  724 EGTedegEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEH 803

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  547 ATVGQAGEAAVGQAEEAIVAQAEEATvGQAGEATVGQAEKATVGQAEEPIVGQAEEtvlrhasdlkvNGVDAEKPRSEES 626
Cdd:TIGR00927  804 EGETEAGEKDEHEGQSETQADDTEVK-DETGEQELNAENQGEAKQDEKGVDGGGGS-----------DGGDSEEEEEEEE 871


                   ....
gi 1958781774  627 KRME 630
Cdd:TIGR00927  872 EEEE 875
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 435-577 9.87e-05

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 45.35  E-value: 9.87e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 435 TTVGQAEEAT--VGQAEEA---TVGQAEEATVGQAEEATVGQAEEATVGQAGEATVSHIEkttvgQAEEAIVGQAEEATV 509
Cdd:PRK13108  306 AAVASAASAVgpVGPGEPNqpdDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEE-----TSEADIEREQPGDLA 380

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958781774 510 GQAEEATvgQAEEATVGQAEEATVDQAEEATVGQAEEATVGQAGEAAVGQAEEAIVAQAEEATVGQAG 577
Cdd:PRK13108  381 GQAPAAH--QVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPGDDPAEPDG 446
PTZ00121 PTZ00121
MAEBL; Provisional
 293-630 1.32e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 45.52  E-value: 1.32e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  293 KDDGRRKTAAEEKKSGETA----LGQAEEASSVSQADKSVLSQAEEATVGHTEEATVIQAQSQAKEGKLSQAEEATVAQA 368
Cdd:PTZ00121  1085 EDNRADEATEEAFGKAEEAkkteTGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDAR 1164

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  369 KETVLSQAEEVKLSQIEEPAISQAKKATVGQAKEaiVSQAEEAIVGHTEKatmgQAEEATVGHIEKTT--VGQAEEATvG 446
Cdd:PTZ00121  1165 KAEEARKAEDAKKAEAARKAEEVRKAEELRKAED--ARKAEAARKAEEER----KAEEARKAEDAKKAeaVKKAEEAK-K 1237

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  447 QAEEATVGQAEEATVGQAEEATVGQAEEATVGQAGEATVSHiEKTTVGQAEEaiVGQAEEATvgQAEEatVGQAEEATvG 526
Cdd:PTZ00121  1238 DAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEAR-KADELKKAEE--KKKADEAK--KAEE--KKKADEAK-K 1309

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  527 QAEEATvdQAEEATvGQAEEATvgQAGEAAVGQAEEAI----VAQAEEATVGQAGEATVGQAEKATVGQAE-----EPIV 597
Cdd:PTZ00121  1310 KAEEAK--KADEAK-KKAEEAK--KKADAAKKKAEEAKkaaeAAKAEAEAAADEAEAAEEKAEAAEKKKEEakkkaDAAK 1384

                          330       340       350
                   ....*....|....*....|....*....|...
gi 1958781774  598 GQAEETvlRHASDLKvNGVDAEKPRSEESKRME 630
Cdd:PTZ00121  1385 KKAEEK--KKADEAK-KKAEEDKKKADELKKAA 1414
rne PRK10811
ribonuclease E; Reviewed
 389-568 1.58e-04

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 45.03  E-value: 1.58e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  389 ISQAKKATVGQAKEAIVSQAEEAIVghtEKATMGQAEEATVGHIEKTTVGQAEEATVGQAEEATVGQAEEATVGQAEEAT 468
Cdd:PRK10811   847 VVRPQDVQVEEQREAEEVQVQPVVA---EVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAP 923

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  469 VGQAEEATVgqagEATVSHIEKTTVgQAEEAIVGQAEEATVGQAEEATVGQAEEATVGQAEEATVDQAEEATVGQAEEAT 548
Cdd:PRK10811   924 VTEQPQVIT----ESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVE 998

                          170       180
                   ....*....|....*....|
gi 1958781774  549 VGQAGEAAVGQAEEAIVAQA 568
Cdd:PRK10811   999 PEVAPAQVPEATVEHNHATA 1018
rne PRK10811
ribonuclease E; Reviewed
 461-633 2.20e-04

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 44.65  E-value: 2.20e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  461 VGQAEEATVGQAEEATVGQAGEATVShiekTTVGQAEEAIVGQAEEATVGQAEEATVGQAEEATVGQAEEATVDQAEEAT 540
Cdd:PRK10811   847 VVRPQDVQVEEQREAEEVQVQPVVAE----VPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAA 922

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  541 VGQAEEATVGQAGEAAVgqaeEAIVAQAEEATVGQAGEATVGQAEKATVGQAEEPIVGQAEETVLRHASDLKVNGVDAEK 620
Cdd:PRK10811   923 PVTEQPQVITESDVAVA----QEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVE 998

                          170
                   ....*....|...
gi 1958781774  621 PRSEESKRMEPIA 633
Cdd:PRK10811   999 PEVAPAQVPEATV 1011
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 341-579 4.89e-04

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 43.77  E-value: 4.89e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 341 EEATVIQAQSQAKEGKLSQAEEATVAQAKETVLSQAEEVKLSQIEEpaiSQAKKATVGQAKEAIVSQAEEAIVGHTEKAT 420
Cdd:COG1196   328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAE---LAEAEEELEELAEELLEALRAAAELAAQLEE 404

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 421 MGQAEEATVGHIEKttvgQAEEATVGQAEEATVGQAEEATVGQAEEATVGQAEEATVGQAGEATVSHIEKTTVGQAEEAI 500
Cdd:COG1196   405 LEEAEEALLERLER----LEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALA 480

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 501 VGQAEEAT---VGQAEEATVGQAEEATVGQAEEATVDQAEEATVGQAEEATVGQAGEAAVGQAEEAIVAQAEEATVGQAG 577
Cdd:COG1196   481 ELLEELAEaaaRLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAA 560


                  ..
gi 1958781774 578 EA 579
Cdd:COG1196   561 AA 562
PTZ00121 PTZ00121
MAEBL; Provisional
 21-630 4.91e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 43.59  E-value: 4.91e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774   21 DEKRPEAASPQKERQERKTATLCFKRRKKVNKKKAKAGSKTAEETKKHAPEAGGSGQRQPAGAWASIKRLVTH-RKPSES 99
Cdd:PTZ00121  1090 DEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDaRKAEEA 1169

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  100 --AEKQKPSEAEMQPED--GALPKKKTKSKLKIPCIRFSRGAKRSRPSKLTEDSGYVRVQGEADDLEIKAqiqpdEQATQ 175
Cdd:PTZ00121  1170 rkAEDAKKAEAARKAEEvrKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDA-----EEAKK 1244

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  176 AKSTQGLQEDVMVRDGKEIQESHISNNVISGEHVIAIELELEKESSALRMRTPGSEKEAKVILVKQSVQVQQASVLENSA 255
Cdd:PTZ00121  1245 AEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKA 1324

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  256 ADSPQ---PVTSTAPLSPATTHQLGLEEPSDSIRESAPSGKDDGRRKTAAEEKKSGETALGQAEEASSVSQADKsvlsQA 332
Cdd:PTZ00121  1325 EEAKKkadAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKK----KA 1400

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  333 EEATVGHTEEATVIQAQSQAKEGKLSQAEEATVAQAKEtvlsQAEEVKLSQIEEPAISQAKKATVGQAKEAIVSQAEEAI 412
Cdd:PTZ00121  1401 EEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKK----KAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAK 1476

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  413 VGHTEKATMGQAEEATVGHIEKTTVGQAEEATVGQAEEATvgQAEEATvgQAEEATvgQAEEATVGQAGEATVSHIEKTT 492
Cdd:PTZ00121  1477 KKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAK--KAEEAK--KADEAK--KAEEAKKADEAKKAEEKKKADE 1550

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  493 VGQAEEaiVGQAEEatVGQAEEA---------TVGQAEEATvgQAEEATVDQA----EEATVGQAEEAtvgQAGEAAVGQ 559
Cdd:PTZ00121  1551 LKKAEE--LKKAEE--KKKAEEAkkaeedknmALRKAEEAK--KAEEARIEEVmklyEEEKKMKAEEA---KKAEEAKIK 1621

                          570       580       590       600       610       620       630
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958781774  560 AEEAIVAQAEEATVGQAGEATVGQAEKATVGQAEEPIVGQAEETVLRHASDLKVNGVDAEKPRSEESKRME 630
Cdd:PTZ00121  1622 AEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAE 1692
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 251-522 1.69e-03

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 42.08  E-value: 1.69e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  251 LENSAADSPQPVTSTAPLSPATTHQL--GLEEPSDSIRESAPSGKDDGRRKTAAEEKKSGETALGQAEEASSVSQADKSV 328
Cdd:PTZ00341   856 IENTAKNAAEQILSDEGLDEKKLKKRaeSLKKLANAIEKYAGGGKKDKKAKKKDAKDLSGNIAHEINLINKELKNQNENV 935

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  329 LSQAEEATVGHTEEATVIQAQSQAKEGKLSQAEEATVAQAKETVLSQAEEVKLSQIEEPAISQAKKATVGQAKEAIVSQA 408
Cdd:PTZ00341   936 PEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVEENIEENVEENVEENI 1015

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  409 EEAIVGHTEKATmgQAEEATVGHIEKTTVGQAEEATVGQAEEATVGQAEEATVGQAE--EATVGQAEEATVGQAGEATVS 486
Cdd:PTZ00341  1016 EENVEEYDEENV--EEVEENVEEYDEENVEEIEENAEENVEENIEENIEEYDEENVEeiEENIEENIEENVEENVEENVE 1093

                          250       260       270
                   ....*....|....*....|....*....|....*.
gi 1958781774  487 HIEKTTVGQAEEAIVGQAEEATVGQAEEATVGQAEE 522
Cdd:PTZ00341  1094 EIEENVEENVEENAEENAEENAEENAEEYDDENPEE 1129
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 427-622 2.17e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 41.12  E-value: 2.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 427 ATVGHIEKTTVGQAEEATVGQAEEATVGQAEEATVGQAeeATVGQAEEATVGQAGEATVSHIEKTTVGQAEEAIVGQAEE 506
Cdd:PRK13108  267 GAVVYIILAPKGREAPGALRGSEYVVDEALEREPAELA--AAAVASAASAVGPVGPGEPNQPDDVAEAVKAEVAEVTDEV 344

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 507 ATVGQAEEATVGQAEEATVGQAEEATVDQAE-EATVGQAEEATVGQAGEAAVGQAEEAivAQAEEATVGQAGEATVGQAE 585
Cdd:PRK13108  345 AAESVVQVADRDGESTPAVEETSEADIEREQpGDLAGQAPAAHQVDAEAASAAPEEPA--ALASEAHDETEPEVPEKAAP 422

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1958781774 586 KATVGQAEEPIVGQAEETVLRHASDLKVNGVDAEKPR 622
Cdd:PRK13108  423 IPDPAKPDELAVAGPGDDPAEPDGIRRQDDFSSRRRR 459
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
 310-592 3.84e-03

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 40.76  E-value: 3.84e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  310 TALGQAEeASSVSQADKSVLSQAEEATVGHTEEATVIQAQSQAKegklSQAEEATVAQAKETVLSQAEEVKLSQIEEPAI 389
Cdd:NF033849   233 ANLGQSA-GTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSH----TTGHGSTRGWSHTQSTSESESTGQSSSVGTSE 307

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  390 SQAKKATVGQAkeAIVSQAEEAIVGHTEKATMGQAEEATVGHIEKTTVGQAEEATVGQAEEA--TVGQAEEATVGQAEEA 467
Cdd:NF033849   308 SQSHGTTEGTS--TTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHSESSSESTGTSVghSTSSSVSSSESSSRSS 385

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  468 TVGQAEEATVGQAGEATVSHIEKTTVGQAEEAIVGQAEEaTVGQAEEATVGQAEEATVGQAEEATVDQAEEATVGQAEEA 547
Cdd:NF033849   386 SSGVSGGFSGGIAGGGVTSEGLGASQGGSEGWGSGDSVQ-SVSQSYGSSSSTGTSSGHSDSSSHSTSSGQADSVSQGTSW 464

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*..
gi 1958781774  548 TVGQAGEA--AVGQAEEAIVAQAEEATVGQageaTVGQAEkaTVGQA 592
Cdd:NF033849   465 SEGTGTSQgqSVGTSESWSTSQSETDSVGD----STGTSE--SVSQG 505
rne PRK10811
ribonuclease E; Reviewed
 329-513 5.18e-03

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 40.41  E-value: 5.18e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  329 LSQAEEATVGHTEEATVIQAQSQAkegklsqAEEATVAQAKETVLSQAEEVKLSQIEEPAISQAKKATVGQAKEAIVSQA 408
Cdd:PRK10811   847 VVRPQDVQVEEQREAEEVQVQPVV-------AEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEV 919

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  409 EEAIVghtekatmgqAEEATVghIEKTTVGQAEEATVgQAEEATVGQAEEATVGQAEEATVGQAEEATVGQAGEATVSHI 488
Cdd:PRK10811   920 IAAPV----------TEQPQV--ITESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAE 986

                          170       180
                   ....*....|....*....|....*
gi 1958781774  489 EKTTVgqaEEAIVGQAEEATVGQAE 513
Cdd:PRK10811   987 VAAEV---ETVTAVEPEVAPAQVPE 1008
rne PRK10811
ribonuclease E; Reviewed
 363-537 8.49e-03

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 39.64  E-value: 8.49e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  363 ATVAQAKETVLSQAEEVklsqIEEPAIS--QAKKATVGQAKEAIVSQAEEAIVghtEKATMGQAEEATVGHIEKTTVgQA 440
Cdd:PRK10811   848 VRPQDVQVEEQREAEEV----QVQPVVAevPVAAAVEPVVSAPVVEAVAEVVE---EPVVVAEPQPEEVVVVETTHP-EV 919

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774  441 EEATVGQAEEATvgqaEEATVGQAEEATVgQAEEATVGQAGEATVSHIEKTTVGQAEEAIVGQAEEATVGQAEEATVgqa 520
Cdd:PRK10811   920 IAAPVTEQPQVI----TESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEV--- 991

                          170
                   ....*....|....*..
gi 1958781774  521 EEATVGQAEEATVDQAE 537
Cdd:PRK10811   992 ETVTAVEPEVAPAQVPE 1008
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 297-602 9.31e-03

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 39.53  E-value: 9.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 297 RRKTAAEEKKSGETALGQAEEASSVSQADKSVLSQAEEATVG--HTEEATVIQAQSQAKEGKLSQAEEATVAQAKETVLS 374
Cdd:COG1196   261 ELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQdiARLEERRRELEERLEELEEELAELEEELEELEEELE 340

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 375 QAEEVKLSQIEEPAISQAKKATVGQAKEAIVSQAEEAI--VGHTEKATMGQAEEATVGHIEKTTVGQAEEATVGQAEEAT 452
Cdd:COG1196   341 ELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEeeLEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE 420

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958781774 453 VGQAEEatvgQAEEATVGQAEEATVGQAGEATVSHIEKTTVGQAEEAIVGQAEEATVGQAEEATVGQAEEAT---VGQAE 529
Cdd:COG1196   421 EELEEL----EEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEaaaRLLLL 496

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958781774 530 EATVDQAEEATVGQAEEATVGQAGEAAVGQAEEAIVAQAEEATVGQAGEATVGQAEKATVGQAEEPIVGQAEE 602
Cdd:COG1196   497 LEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAA 569
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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