|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.53e-170 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 476.24 E-value: 6.53e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 1 MNPYAKLLSTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 81 TGQWDITQLNHPTSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSLNPTLLTIMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 161 PAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTLNKTKALKLPTMMTSWSKTPTL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 241 NATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYYSTITLPPNSTNHMKQWHINKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 733386449 321 TNTTIAISTSLSILLLPLSPMLLTMT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-323 |
5.15e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 388.01 E-value: 5.15e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 1 MNPYAKLLSTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 81 TGQWDITQLNHPTSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSlNPTLLTIMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 161 PAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTLNKTKALKLPTMMTSWSKTPTL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 241 NATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYYSTITLPPNSTNHMKQWHINKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
...
gi 733386449 321 TNT 323
Cdd:MTH00135 320 QLT 322
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-326 |
4.60e-134 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 385.43 E-value: 4.60e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 1 MNPYAKLLSTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 81 TGQWDITQLNHPTSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSLNPTLLTIMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 161 PAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTLNKTKALKLPTMMTSWSKTPTL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 241 NATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYYSTITLPPNSTNHMKQWHINKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*.
gi 733386449 321 TNTTIA 326
Cdd:MTH00070 321 TNNLLS 326
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
4.91e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 344.91 E-value: 4.91e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 1 MNPYAKLLSTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 81 TGQWDITQLNHPTSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSLNPTLLTIMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 161 PAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTLNKTKALKLPTMMTSWSKTPTL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 241 NATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYYSTITLPPnSTNHMK-QWHINK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQFEN 319
|
....*.
gi 733386449 320 PTNTTI 325
Cdd:MTH00105 320 TKPMTL 325
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-315 |
7.50e-99 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 296.11 E-value: 7.50e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 1 MNPYAKLLSTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 81 TGQWDITQLNHPTSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSLNPTLLTIMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 161 PAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTLNKTKALKLPTMMTSWSKTPTL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 733386449 241 NATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYYSTITLPPNSTNHMKQW 315
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSW 315
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
12-325 |
1.22e-87 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 267.57 E-value: 1.22e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 12 SLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQLNH 91
Cdd:MTH00041 12 SIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 92 PTSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSLNPTLLTIMAIAPAALGGWMGLN 171
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 172 QTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTLNKTKALKLPTMMTSWSKTPTLNATLMLTLLSL 251
Cdd:MTH00041 172 QTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSL 251
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 733386449 252 AGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYYSTITLPPNSTNHMKQWHINKPTNTTI 325
Cdd:MTH00041 252 GGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYG 325
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-319 |
5.41e-67 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 213.92 E-value: 5.41e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 1 MNPYAKLLSTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 81 TGqwditqLNHPTSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILfltSHSLNPTLLTIMAIA 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 161 PAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTLNKTKALKLPTMMTSWSKTPTL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 733386449 241 NATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTyYSTITLPPNSTNHMKQWHINK 319
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRIS-YSSLMLNYNKNKWNLKKKKNK 310
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-320 |
5.80e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 185.09 E-value: 5.80e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 5 AKLLSTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 85 DITqlnhptscLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPI-TILFLTSHSLNPTLLTIMAIAPAA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 164 LGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTLNKtKALKLPTMMTSWSKTPTLNAT 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWS-GDSGSMKDLGSLKPSYKTGLS 235
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 733386449 244 LMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYYSTITLpPNSTNHMKQWHINKP 320
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSS-SKSKKSNSSKVLNSS 311
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-310 |
2.72e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 168.03 E-value: 2.72e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 1 MNPYAKLLSTmSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWF 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 81 TgqwdiTQLNHPTScLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSLNPTLLTIMAIA 160
Cdd:MTH00011 83 P-----SLLKNITA-LMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 161 PAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTLNKTKALKLPTMMTSWSKTPTL 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 241 NATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTyYSTITLPPNSTN 310
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLI-FNFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-302 |
4.69e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 154.06 E-value: 4.69e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 12 SLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFS---SLMNAWFTgqwditq 88
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGgslSFSNLYLS------- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 89 lnhPTSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHslNPTLLTIMAIAPAALGGWM 168
Cdd:MTH00197 79 ---LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 169 GLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTLNKTKALKLPTMMtSWSKTPTLN-ATLMLT 247
Cdd:MTH00197 154 GMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQY-SNPESMSSNlVFLGLS 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 733386449 248 LLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYYSTI 302
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-299 |
1.92e-37 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 139.87 E-value: 1.92e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 14 LLGTTITISSNHWVMAWTGLEINTLAIIPLIS-KPHHPRAIEATIKYFLVQAAASALVLF-SSLMNAwFTGQWDITQL-- 89
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIaa 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 90 ---NHPTSCLLLTTAIAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTVMKL----PPITILFLTSHSLNP---T 152
Cdd:COG1007 191 alaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 153 LLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTI-ILAYSPK-LTLLTFYL--YSLNTITIFLTLNK-TKALKL 227
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYLlaYLFMNLGAFAVILLlSRKGGE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 733386449 228 PTMMTSWS----KTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYY 299
Cdd:COG1007 351 AEEIEDLAglarRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKA 426
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-299 |
1.98e-32 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 126.09 E-value: 1.98e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 14 LLGTTITISSNHWVMAWTGLEINTLAIIPLIS-KPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQL--- 89
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIaka 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 90 ------NHP---TSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITIL-------FLTSHSLNPTL 153
Cdd:PRK05777 193 ladgsgNSLlllFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLlrllvvaFGGLSEDWQQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 154 LTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTL--LTFYL--YSLNTITIF--LTLNKTKALKL 227
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 733386449 228 pTMMTSWS----KTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYY 299
Cdd:PRK05777 353 -ESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKL 427
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.09e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 119.36 E-value: 1.09e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLI-SKPHHPRAIEATIKYFLVQAAASALVLFS-------------SLMNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 79 WFTGQWDITQLNHPTSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFltSHSLNPTLLTIMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 159 IAPAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAY----SPKLTLLTFYLYSLNTITIF---LTLNKTKALKLPTMM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIgsfeSIQASLVYLFIYIIMSICVFsiiLALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 733386449 232 TSwSKTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRL 296
Cdd:MTH00196 240 LS-RRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
1.52e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 117.81 E-value: 1.52e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLIS-KPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQLNH 91
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 92 PTSC----LLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSLNPTLL-TIMAIAPAALGG 166
Cdd:MTH00199 186 ILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIcAVLSIIYGAIGA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 167 wmgLNQTQLRKILAFSSISHLGWMTIILAY----SPKLTLLTFYLYSLNTITIF---LTLNKTKALKLPTMMTSwSKTPT 239
Cdd:MTH00199 266 ---LNQTKIKRLLAYSGIGHMGFILFGVAIgsfeSIQASLIYMIIYVIMSICSFsiiLSLKLTKGLIVEVSGLS-RKNPV 341
|
250 260
....*....|....*....|....*...
gi 733386449 240 LNATLMLTLLSLAGLPPLSGFLPKWLII 267
Cdd:MTH00199 342 IALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
9.10e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 110.10 E-value: 9.10e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 23 SNHWVMAWTGLEINTLAIIPLI-SKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQL--------NHPT 93
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 94 SC---LLLTTAIAMKLGLVPFHFWFPEVLQGSSLT-TALLLSTVMKLPPITILFLTS--HSLNPT---LLTIMAIAPAAL 164
Cdd:pfam00361 81 LLllfLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 165 GGWMGLNQTQLRKILAFSSISHLGWMTIILA----YSPKLTLLTFYLYSLNTITIFL-----TLNKTKALKLPTMMTSWS 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 733386449 236 KTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-296 |
1.49e-27 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 112.35 E-value: 1.49e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 14 LLGTTITISSNHWVMAWTGLEINTLAIIPLIS-KPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQLNHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 93 TSC------------LLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITIL-------FLTSHSLNPTL 153
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFlrlflyiLFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 154 LTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWM-------TIILAYSPKLTLLTFYLYSLNTITIFLTLNKTKALK 226
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYIligllagTLEGIKAVLFYIFIYALMSLGAFGVLSLLRSYKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 733386449 227 LPTM--MTSWSKT-PTLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRL 296
Cdd:TIGR01770 352 IEYIsdFAGLFKTnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
2.58e-24 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 102.53 E-value: 2.58e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQLNH- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 92 ---------PTSCLLLTTAIAMKLGLVPFHFWFPEVL-QGSSLTTALLLSTVMKLPP------ITILFLTSHSLNP-TLL 154
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGLLTKVGVyailrvLTLLFGADPALFLgTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 155 TIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLN----TITIFLT----LNKTKALK 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNhalaKALLFLAagaiERATGTRD 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 227 LPTMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRL 296
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-305 |
1.34e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 86.84 E-value: 1.34e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 15 LGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAI---------EATIKYFLVQAAASALVLFSSLMNAWFTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 84 ------------WDITQLNHPTSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLppITILFLTSHSLNP 151
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 152 TLLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTL-------LTFYLYSLNTITIFLTL----- 219
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLqaswtyaVTYLVSALASFTVICTLeefgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 220 -------------NKTKALKLPTMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATT---IA 283
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIyylVA 516
|
330 340
....*....|....*....|....*...
gi 733386449 284 MFSLL----SLFFYLRL--TYYSTITLP 305
Cdd:MTH00198 517 LFAIIctciSAFYYIRIvaTIYFNFTRP 544
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
8.32e-17 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 81.20 E-value: 8.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 51 RAIEATIKYFLVQAAASALVLFS-SLMNAWFTGQWDI---------TQLNHPTSCLL----LTTAIAMKLGLVPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 117 EVLQGS-----------SLTTALLLSTVMklppITILFLTSHSLNPTLLTIMAIAPAALGGWMGLNQTQLRKILAFSSIS 185
Cdd:CHL00049 239 DVYEGSptpvvaflsvtSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 186 HLGWMTI-ILA------YSPKLTLLTFYLY----SLNTITIFLTLNKTKALKlpTMMTSWSKTPTLNATLMLTLLSLAGL 254
Cdd:CHL00049 315 QIGYVIIgIIVgdsndgYASMITYMLFYIFmnlgTFACIVLFGLRTGTDNIR--DYAGLYTKDPFLALSLALCLLSLGGI 392
|
....*....
gi 733386449 255 PPLSGFLPK 263
Cdd:CHL00049 393 PPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
3.18e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 73.55 E-value: 3.18e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 50 PRAIEATIKYFLVQAAASALVLF-SSLMNAWFTGQwdiTQL--------NHPTSCLLLT-----TAIAMKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLsaialaliTSPSLGLALAlvfviAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 116 PEVLQGSSLTTALLLSTVMKLP--PITILFLTSHSLNPT-----LLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAgfALAIRLLVTAFPSFDeqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 189 WMTIILA------YSPKLTLLTFYLYsLN----TITIFLTLnKTKALKLPTMMTSWSKTPTLNATLMLTLLSLAGLPPLS 258
Cdd:PRK02504 314 FVMIGLVagteagYASMVFYLLAYLF-MNlgafACVILFSL-RTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLA 391
|
....*
gi 733386449 259 GFLPK 263
Cdd:PRK02504 392 GFFGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-267 |
1.35e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 68.18 E-value: 1.35e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 38 LAIIP---LISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQW-----DITQLNHPTS-----CLLLTTAIAM 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 105 KLGLVPFHFWFPEVLQGSSLTTALLLSTVM-KLP-------PITILFLTSHSLNPTLLTIMAIApAALGGWMGLNQTQLR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLlKMGgygllrfALPLFPEASAYFAPLLAALGVIG-IIYGALVALAQTDLK 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 177 KILAFSSISHLGWMTI-ILAYSPK-LTLLTFYLYS--LNTITIFLTL----NKTKALKLPTMMTSWSKTPTLNATLMLTL 248
Cdd:COG1008 301 RLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQMVShgLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAA 380
|
250
....*....|....*....
gi 733386449 249 LSLAGLPPLSGFLPKWLII 267
Cdd:COG1008 381 LASLGLPGTSGFVGEFLVL 399
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-299 |
1.13e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 65.67 E-value: 1.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 97 LLTTAIAMKLGLVPFHFWFPEVLQG-SSLTTALLLSTVMKLPPITIL------FLTSHSLNPTLLTI-MAIAPAAL--GG 166
Cdd:PRK08375 207 FVLLALALKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIriyftvFGGDFRFALGLGWLlAVLALLSMlvGS 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 167 WMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLL--TFYL--YSLNTITIFLTLN----KTKALKLPTMMTSWSKTP 238
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGaievTYGTRRLSELSGLGRRMP 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 733386449 239 TLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYY 299
Cdd:PRK08375 367 LTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.35e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.50 E-value: 1.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 33 LEINTLAIIPLIS-KPHHPRAIEATIKYFLVQAAASALVLFS---------SLMNAWFTGQWDITQLNHPTSCL-LLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 102 IAMKLGLVPFHFWFPEVLQG--SSLTTALLLSTVMKLPPIT-ILF-LTSHSLNPT----LLTIMAIAPAALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALArVLFsIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 174 QLRKILAFSSISHLGWMTI-----ILAYSPklTLLTFYLYSLNTITIFLTLNKT--KALKLPTMMTSWSKTPTLNAT--- 243
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNHAlyKALLFLTAGAVIYETGTRNLNelg 387
|
250 260 270
....*....|....*....|....*....|....*
gi 733386449 244 ------------LMLTLLSLAGLPPLSGFLPKWLI 266
Cdd:PRK08376 388 glartmpkttiaFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-288 |
1.82e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 64.96 E-value: 1.82e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 50 PRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQW----DITQLNHPTSC-----LLLTTAIAMKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 120 QGSSLTTALLLSTVMKLPPITI------LFLTSHSLNPTLLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTII 193
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFlrfnlpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 194 LAYSPKLTLL--TFYLYSLNTITIFLTL------NKTKALKLPTMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPKWL 265
Cdd:TIGR01972 312 IFSFNELGISgaVFQMISHGLITAALFLlvgvlyERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
250 260
....*....|....*....|...
gi 733386449 266 IIQELTKQELTTAAttIAMFSLL 288
Cdd:TIGR01972 392 ILLGSFKVNPVVAF--LAALGIV 412
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-296 |
2.26e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 61.71 E-value: 2.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 48 HHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQLNH----PTSCLLLTTAIAM-------KLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAaaptILSSPLLTLILLLlllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 117 EVLQGSSLTTALLLSTVM---------KLPPITilfltshSLNPTLLTIMAIAPAA---LGGWMGLNQTQLRKILAFSSI 184
Cdd:COG1009 236 DAMEGPTPVSALLHAATMvkagvyllaRLSPLF-------ALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYSTV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 185 SHLGWMTIIL---AYSPKLTLLT---FYLYSLntitiFLT------------LNKTKALklptmmtsWSKTPTLNATLML 246
Cdd:COG1009 309 SQLGYMFLALgvgAYVAALFHLLthaFFKALL-----FLGagsvihatgtrdIRKMGGL--------RKKMPITAITFLI 375
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 733386449 247 TLLSLAGLPPLSGFLPKWLIIQE-LTKQELTTAATTIAMF-SLLSLFFYLRL 296
Cdd:COG1009 376 GALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRL 427
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-263 |
1.15e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 56.47 E-value: 1.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 81 TGQWDITQL-NHPTSCLLLTTAIAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTVM---------KLPPItilF 143
Cdd:PRK12644 184 AGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---F 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 144 LTSHSLNPTLLtIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPK------LTLLTfyLYSLNTITIFL 217
Cdd:PRK12644 261 ADVPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALFL 337
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 733386449 218 T------------LNKTKALklptmmtsWSKTPTLNATLMLTLLSLAGLPPLSGFLPK 263
Cdd:PRK12644 338 VvgiidhstgtrdIRKLSGL--------GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-293 |
1.16e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 56.11 E-value: 1.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 53 IEATIKYFLVQAAASALVL---------FSSLMNAWFTGQWDITQLNHP--TSCLLLTTAIAMKLGLVPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLlgigllygtFGTLNMAHIAMRLNDMGDTATltTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 122 SSLTTALLLSTVMKLPPI-------TILFLTSHSLNPTLLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTIIL 194
Cdd:PRK12663 236 PNTEVAALFAALLTKVGIyalirvfTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 195 AYSPKLTLLTFYLYSLNTITI----FLTLNKTKAL----KLPTMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPKWLI 266
Cdd:PRK12663 316 ALGTPAGINGAIFYLVHDMVVktalFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|...
gi 733386449 267 IQ-ELTKQELTTAATT-----IAMFSLLSLFFY 293
Cdd:PRK12663 396 VQgALDNGAYILLALMlitslITMYSLFRIFFL 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
1.65e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 55.77 E-value: 1.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 34 EINTLA---IIPLISKphhpRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQ----LNHPTS-------CLLLT 99
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADisqgLINDTStgfalivFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 100 TAIAMKLGLVPFHFWFPE-----------VLQGS-SLTTALLLSTVMKLPPITILFLT-----SHSLNPTLLTIMAIAPA 162
Cdd:PRK08668 204 AFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 163 ALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLN----TITIFLTLN----KTKALKLPTMMTSW 234
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNhalfKGLFFLIFAaviyRTGTTKISEMGGLI 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 733386449 235 SKTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTY 298
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
2.30e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 55.34 E-value: 2.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 33 LEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQLNH--PTSCLLLTTAIAMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 111 FHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSLNPT--LLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 189 WmtiILAySPKLTLLTFYLYSLNTITIFLTlnktkALKLPTM-MTSWSKTPTLNAT-LMLTL--LSLAGLPPLSGFLPKW 264
Cdd:PRK07234 283 F---ILA-APLVGGLYALAHGLVKSTLFLC-----AGALPSRnFTELISQMLGIGKwIPLTMasFSIAGFPLLAGFVSKV 353
|
....*..
gi 733386449 265 LIIQELT 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-285 |
3.97e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 54.93 E-value: 3.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 109 VPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSLNPT-----LLTIMAIAPAALGGWMGLNQTQLRKILAFSS 183
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 184 ISHLGWMTIILAYSPKLTLLTFYLY----SLNTITIFLTL----NKTKALKLPTMMTSWSKTPTLNATLMLTLLSLAGLP 255
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAgiidHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170 180 190
....*....|....*....|....*....|
gi 733386449 256 PLSGFLPKWLIIQELTKQELTTAATTIAMF 285
Cdd:PRK12647 372 PLFGFLAKELIYEALLEAPLWSLILTVAAV 401
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
4-268 |
2.46e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 52.24 E-value: 2.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 4 YAKLLSTMSLllgttiTISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSL---MNAWf 80
Cdd:PRK06458 114 YQLFLFTMLL------ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTIlvyANAA- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 81 tgqwdiTQLNHPTSCLLLTTAIAM----------------------KLGLVPFHFWFPE-----------VLQGSSLTTA 127
Cdd:PRK06458 187 ------TVMGDGEMAILWTELLKHaslldptlmklafvflligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVA 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 128 LLLstVMKLPPITILFLTSHSLNPtLLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKL----TLL 203
Cdd:PRK06458 261 LYA--VLRYYILIDAAIGSDFPGR-LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALL 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 733386449 204 TFYLYSLNTITIFLT----LNKTKALKLPTMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQ 268
Cdd:PRK06458 338 HMLNHSLTKSAIFFAsgnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-291 |
5.60e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 51.27 E-value: 5.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 55 ATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQLNHPT-----SCLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALL 129
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 130 LSTVMKLPPI--TILFLTShSLNP-----TLLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLG--------WMTIIL 194
Cdd:PRK08667 243 MSGVMLKVAVygLVRFLMD-VLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGV 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 195 AYSPKLTLLTF---YLYSLNTIT----IFLT----LNKTKALKLPTMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPK 263
Cdd:PRK08667 322 YGLDTLALLALggaLFHSLNHALfkslLFLTagsvVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASE 401
|
250 260
....*....|....*....|....*....
gi 733386449 264 WLIIQELTKQ-ELTTAATTIAMFSLLSLF 291
Cdd:PRK08667 402 LLLYESFFQSfSVADPLIKILLFSVLAIF 430
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-270 |
6.77e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 50.91 E-value: 6.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAA------SALVLFSSLMNAWFTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 87 TQLNHPT----------SCLLLTTAIAMKLGLVPFHFWFPEV-LQGSSLTTALLLSTVMKLPPITILFLTS-------HS 148
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 149 LNPTLLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTL--------N 220
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhR 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 733386449 221 KTKALKLPTMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQEL 270
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
8.88e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 50.35 E-value: 8.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 96 LLLTTAIAMKLGLVPFHFWFPEVL-QGSSLTTAL---LLSTVMKLPPI---TILFlTSHSLNpTLLTIMAIAPAALGGWM 168
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTAVfagLLTKVGVYAIIrthTLLF-PGGGLD-TLLMVVALLTMVVGILG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 169 GLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITIFLTL--------NKTKALKLPTMMTSWSKTPTL 240
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLflvvglieRQAGSSSLRRLGGLAKASPLL 370
|
170 180
....*....|....*....|....*...
gi 733386449 241 NATLMLTLLSLAGLPPLSGFLPKWLIIQ 268
Cdd:PRK12665 371 AVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-316 |
1.28e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 50.08 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 95 CLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITIL-----FLTSHSLNPTLLTIMAIAPAALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLirsspLFEQAPLALIIVTIVGSLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 170 LNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLtFYLYS---------LNTITIFLTLNKTKALKlptMMTSWSKTPTL 240
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISL-FHLMNhaffkallfLSAGSVIHALSDEQDMR---KMGGLISFLPL 368
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 733386449 241 NATLMLT-LLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFS-LLSLFFYLRLTYYSTITLPPNSTNHMKQWH 316
Cdd:MTH00020 369 TYIFFLIgSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNTNLKKAVFFHLH 446
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
2.63e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 48.94 E-value: 2.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 55 ATIKYFLVQAAASALVLFSSLMNAWFTGQWD------ITQ-LNHPTSCLLLTTAI---AMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQnLSLNTQLILLTGLLlgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 125 TTALLLSTVM-KLPPITILFL-------TSHSLNPTLLTIMAIApAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAY 196
Cdd:PRK07363 238 AVAILLGGVLaKLGTYGLLRFglqlfpqTWSLVAPGLAIIGTIS-VIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 197 SPKLTLLTFYLYSLNTITIFLTLNK----------TKAL-KLPTMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPKWL 265
Cdd:PRK07363 317 GTQLSLLGAVAQMISHGLILALLFHlvgiverkvgTRDLdVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFI 396
|
...
gi 733386449 266 IIQ 268
Cdd:PRK07363 397 VFQ 399
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
4.01e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.49 E-value: 4.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 34 EINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQ-----LNHPTSCLLLTtAIAMKL-- 106
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYG-GLLLLIfg 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 107 -----GLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITI------LFLTSHSLNPTLLTIMAIAPAA--LGGWMGLNQT 173
Cdd:PRK06277 209 llygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSAQGVLIALSVLAmvFGVVMALLQT 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 174 QLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLYSLNTITI--------FLTLNKTKALKLPTMMTSWSKTPTLNATLM 245
Cdd:PRK06277 289 DYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYksalflgaGIVSYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 733386449 246 LTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTY 298
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-263 |
8.46e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 47.73 E-value: 8.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 98 LTTAIAM--------KLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITIL--FLTSHSLNPT---LLTIMAIAPAAL 164
Cdd:PRK12650 206 LTTVVAVliavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLlrFSPVFHDVAVwnwLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 165 GGWMGLNQTQLRKILAFSSISHLGWM--TIILAYSPKLT--LLTFYLYSLNTITIFLTL----NKTKALKLPTMMTSWSK 236
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIvaTIGVGTPFALTaaVVHTLAHALFKSSLFMLIgvvdHQAGTRDIRRLGSLWRR 365
|
170 180
....*....|....*....|....*..
gi 733386449 237 TPTLNATLMLTLLSLAGLPPLSGFLPK 263
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
96-272 |
9.17e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 47.51 E-value: 9.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 96 LLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTV-MKLPPITILFLTSHSLNPTL-----LTIMAIAPAALGGWMG 169
Cdd:PRK08042 184 LLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 170 LNQTQLRKILAFSSISHLG--------WMTIILAYSPKLTLLTFY--LY-----SLNTITIFL----TLNKTKALKLPTM 230
Cdd:PRK08042 264 LMEHNIQRLLAYHTLENIGiillglgaGVTGIALEQPALIALGLVggLYhllnhSLFKSVLFLgagsVWFRTGHRDIEKL 343
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 733386449 231 MTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTK 272
Cdd:PRK08042 344 GGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
1.09e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 47.00 E-value: 1.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 38 LAIIPL---ISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTG--QWDITQLNHPT----SCLLLTTAI----AM 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLRSHTlplsTQLLLLAPIlvgfGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 105 KLGLVPFHFWFPEV-LQGSSLTTALLLSTVMKLPPITIL------FLTSHSLNPTLLTIMAIAPAALGGWMGLNQTQLRK 177
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 178 ILAFSSISHLGWMTIILAYSPKLTLL--TFYLYSLNTITIFLTL------NKTKAL---KLPTMMTSWSKTPTLNATLML 246
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSILaaVFQMISHGLISALLFLlvgvvyKKTGSRdvdVLRGLLNPERGLPITGSLMIL 377
|
250 260
....*....|....*....|
gi 733386449 247 TLLSLAGLPPLSGFLPKWLI 266
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLV 397
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-296 |
1.59e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 46.48 E-value: 1.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 56 TIKYFLVQAAASALVLFSSLMNAWFTGQWD-------ITQLNHPTSCLLLTTAI------AMKLGLVPFHFWFPEVLQG- 121
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNmadisvkIAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGSYYAp 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 122 ----SSLTTALL----LSTVMKLppITILFLTSHSLNPTLLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTII 193
Cdd:PRK07691 240 piaiAALFGALLtkvgVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 194 LAYSPKLTLLTFYLYSLNTITI----FL----TLNKTKALKLPTMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPKWL 265
Cdd:PRK07691 318 VAMMTESGMIGAIYYLIHDMIVkaalFLligiMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFF 397
|
250 260 270
....*....|....*....|....*....|.
gi 733386449 266 IIQELTKQELTTAATTIAMFSLLSLFFYLRL 296
Cdd:PRK07691 398 IVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
4-263 |
1.70e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 46.75 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 4 YAKLLSTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISkpHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQ 83
Cdd:PRK12649 114 YQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWR--HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 84 WDITQLNHPTSCL--------------LLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSL 149
Cdd:PRK12649 192 YDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 150 NPT-----LLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYS----PKLTLLTFYLYSLNTITIFLTLN 220
Cdd:PRK12649 272 SGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTtyhePGLGVAAATFHLLNHATFKACLF 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 733386449 221 KTKALKLPTMMT-SWSKTPTLNATLMLTL-------LSLAGLPPLSGFLPK 263
Cdd:PRK12649 352 LVAGIVAHEAATrDIRKLGGLRKEMPITFivasiaaLAMAGIPPLNGFLSK 402
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-296 |
2.90e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.50 E-value: 2.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 96 LLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLS----TVMKLPPITI--------LFLTSHSLNPTLLTIMAIApAA 163
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSgtstKVMIYLIIRIvydvfkanFVFTTLPFNNVFMILAALA-IV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 164 LGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLY----SLNTITIFLTLN----KTKALKLPTMMTSWS 235
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGsisyHFGTTKLEDCLNLWK 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 733386449 236 KTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRL 296
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
2.92e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 45.74 E-value: 2.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 33 LEINTLAIIPLISKPHHPRAIEATIKYFLVQAAAS------ALVLFSSLMNAWFTGQWDITQLNHPTSCLLLTTAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 107 GLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILFLTSHSLNP------TLLTIMAIAPAALGGWMGLNQTQLRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 181 FSSISHLGWMTIILAYS---PKLTLLTFYLYSLNTITI----FLTLN----KTKALKLPTMMTSWSKTPTLNATLMLTLL 249
Cdd:PRK06525 302 YSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAkslfFLVAGalsySCGTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250
....*....|....*...
gi 733386449 250 SLAGLPPLSGFLPKWLII 267
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIF 399
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-268 |
4.03e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 45.33 E-value: 4.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 92 PTSCLLLTTAI--AMKLGLvpfHFWFPEVLQGSSLTTALLLSTVMKLPPITIL-----FLTSHSLNPTLLTIMAIAPAAL 164
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFF 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 165 GGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLY-----------SLNTITIFLTLNKTKALKLPTMMTS 233
Cdd:MTH00032 303 AATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLVnhaffkallflSAGSVIHSTTVDEQDMRKMGGLIHS 382
|
170 180 190
....*....|....*....|....*....|....*
gi 733386449 234 WSKTPTLnatLMLTLLSLAGLPPLSGFLPKWLIIQ 268
Cdd:MTH00032 383 IPFTYTM---MLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
2.11e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 42.88 E-value: 2.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 50 PRAIEATIKYFLVQAAASALVLFSSL----MNAWFTGQWDITQL-NHPTS---------CLLLttAIAMKLGLVPFHFWF 115
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLlNLPLPpgvqywlflAFFI--AFAVKMPMFPLHTWL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 116 PEVLQ-----GSSLTTALLLSTV------MKLPpitiLF-LTSHSLNPTLLTIMAIApAALGGWMGLNQTQLRKILAFSS 183
Cdd:PRK05846 235 PDAHVqaptaGSVLLAGILLKMGaygllrFSLP----LFpDASHEFAPIIITLGVIA-IIYGALVALAQTDIKKLIAYSS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 184 ISHLGWMTIILAYSPKLTL--LTFYLYSLNTITIFLTL------NKTKALKLPTMMTSWSKTPTLNATLMLTLLSLAGLP 255
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLlvgvlyDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
250
....*....|..
gi 733386449 256 PLSGFLPKWLII 267
Cdd:PRK05846 390 GTSGFVGEFLIL 401
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
2.26e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 42.83 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 82 GQWDITQL--NHPTSCLLLTTAIA--MKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITIL-----FLTSHSLNPT 152
Cdd:MTH00207 165 GHWSITNMwqTDMNNYIALSIMIAamTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 153 LLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYS-PKLTLLTFYLYSLNTITIFLTLNKT-----KALK 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 733386449 227 LPTMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQ 268
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
7-190 |
4.45e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 41.99 E-value: 4.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 7 LLSTMSLLLGTTITISSNHWVM---AW--TGLEINTLaiipLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFT 81
Cdd:PRK08168 103 VRALAGVLAAVHLLVLSDHLLVliaAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEV 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 82 GQWDITQL-----NHPTS------CLLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPP-ITILFLTSHSL 149
Cdd:PRK08168 179 GSLSLSALwahlaAQGASpslqaaALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGfVLIRFAPLLEQ 258
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 733386449 150 NP---TLLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWM 190
Cdd:PRK08168 259 APparWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-293 |
4.86e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 42.05 E-value: 4.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 110 PFHFWFPEVLQGSSLTTALLLSTVMKLPPITILF-----LTSHSLNPTLLTIMAIAPAALGGWMGLNQTQLRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFrftplLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 185 SHLGW-MTII-----LAYSPKLTLLTFYLYSLNTiTIFLTLNK-------------------TKALKLPTMMTSWskTPT 239
Cdd:PRK12646 308 SQLGMiMAMVgigggYAQHQQDAIASIYVFVLFA-ALFHLMNHaifkcalfmgvgiidheagTRDIRILSGMRQL--FPK 384
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 733386449 240 LNATLMLTLLSLAGLPPLSGFLPKWLIIQELTK--------QELTTAATTIAMFSLLSLFFY 293
Cdd:PRK12646 385 MNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfsLISMIIIVFIGVIASIFTFTY 446
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-324 |
1.50e-03 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 36.08 E-value: 1.50e-03
10 20 30
....*....|....*....|....*....|....
gi 733386449 291 FFYLRLTYYSTITLPPNSTNHMKQWHINKPTNTT 324
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTL 34
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-278 |
2.00e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 40.01 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 55 ATIKYFLVQAAASALVLFSSLMNAWFTGQ--WDITQL---NHPTSCLLLT-----TAIAMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELgakSYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 125 TTALLLSTVM--------------KLPPITILFltshslnPTLLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWM 190
Cdd:PRK12561 218 PVSMILAGVLlkmggyalirfnvqMLPDAHVYF-------APALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 191 TIILAYSPKL----TLLTFYLYSLNTITIFL----TLNKTKALKLPTMMTSWSKTPTLNAT-LMLTLLSLAgLPPLSGFL 261
Cdd:PRK12561 291 LLGIAAFTDLgisgAMLQMISHGLIAAALFFltgvTYERTHTLSIPNMGGLAKVMPKTFALfTASSMASLA-LPGMSGFV 369
|
250
....*....|....*..
gi 733386449 262 PKWLIIQELTKQELTTA 278
Cdd:PRK12561 370 SELTVFLGITSSDVYSS 386
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-270 |
2.15e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.77 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 7 LLSTMSL-LLGTTITISSNHWVM---AWTGLEINTLAIIPLISKPHHPRAIEATIKYFlvqaaASALVLFSSLMNAWFTG 82
Cdd:PRK06459 74 LSSLYILtILGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFVFMAFGEL-----STVLILAGFAWAFIISG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 83 QWDITQLNHPTSCLLLTTAIAMKLGLVPFHF--WFPEVLQGSSLTTALLLSTVMKLPPI----TILFLTSHS-LNPTLLT 155
Cdd:PRK06459 149 TTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVygilKMTILTQTIpIGYFGLT 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 156 IMAIA--PAALGGWMGLNQTQLRKILAFSSISHLGWM-----TIILAYSPKLTLLTFYLYSLNTITIFLTLNKTkALKLP 228
Cdd:PRK06459 229 ILAIGafSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSFAHSVAKT-GLFLS 307
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 733386449 229 TMMTSWSKTPTLNAT--------LMLTLLSLAGLPPLSGFLPKWLIIQEL 270
Cdd:PRK06459 308 SGLQEKQSITYSKKIrnrwielgLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-277 |
2.21e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.80 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 11 MSLLLGTTITISSNHWVMaWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLM-------NAWFTGQ 83
Cdd:PRK06589 124 LTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliytktgNLDFVSG 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 84 WDITQLNHPTSCLLLTTAIAmKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILF-----------LTSHSLNPT 152
Cdd:PRK06589 203 GLFSKNQSIILLLMFIYGIA-KTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYkillyifglsyLQRIFAEFN 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 153 LLTIMAIAPAALGGWMGLNQTQLRKILAFSSISHLGWMT----IILAYSPKLTLLTFYLYSLNTITIFLTL----NKTKA 224
Cdd:PRK06589 282 WLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsafILTPKALGAAILHLVSHSFAKICLFYSMgsiySLKKE 361
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 733386449 225 LKLPTMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTT 277
Cdd:PRK06589 362 DQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPW 414
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
104-300 |
2.40e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 39.08 E-value: 2.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 104 MKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKLPPITILfLTSHSLNPTLLTIMAIAPAALGGWMGLNqtqLRKILAFSS 183
Cdd:MTH00091 69 MKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVL-LQFFSKNFFFLLLFGLLICFFQMFLLKS---YKNLLILSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 184 ISHLGWMtiilayspkltLLTFYLYSLNTITIFLTLNKTKALklptMMTSWSKTPTLNATLMLTLLSLAGLPPLSGFLPK 263
Cdd:MTH00091 145 TESFNWL-----------ILSFFFSFFNVFFLFFYYFLLMLF----LIPKFNNVNKLNFVSWETLLVFMNLPFSVTFFVK 209
|
170 180 190
....*....|....*....|....*....|....*..
gi 733386449 264 WLIIQELTKqelttaattIAMFSLLSLFFYLRLTYYS 300
Cdd:MTH00091 210 IFSLSEILK---------VLGFFLLFLLFLMFLSVLS 237
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-300 |
2.52e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 39.38 E-value: 2.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 21 ISSNHWVMAWTGLEINTLAIIPLISKPHHPRAIEATIKYFLVQAAASALVLFSSLMNAWFTGQWDITQ----LNHPTSCL 96
Cdd:PRK06591 132 IATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDiaayLQEHTNSR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 97 LLTTAIA-------MKLGLVPFHFWFPEVLQGSS---------LTTALLLSTVMKLPPITILFLTSHSLNPTLLTIMAIA 160
Cdd:PRK06591 212 IITIAIGffligaiLKTAFFPMHFWMMRAYNNTAsvilvylagISTIIGIYIIYKFTYIIIGYETIKTAITNFIRPIALA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 161 PAALGGWMGLNQTQLRKILAFSSISHLGWMTIILAYSPKLTLLTFYLY--SLNTITIFLtlnktkalkLPTMMTSWSKTP 238
Cdd:PRK06591 292 TLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLadSINKIALFL---------IDAYNESYKREP 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 733386449 239 tLNATLMLTLLSLAGLPPLSGFLPKWLIIQELTKQELTTAATTIAMFSLLSLFFYLRLTYYS 300
Cdd:PRK06591 363 -NKVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLLL 423
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
110-190 |
4.49e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.85 E-value: 4.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386449 110 PFHFWFPEVLQGSSLTTALLLSTVMKLPPItilFLTS-----HSLNPTLLTIMAIAPAA---LGGWMGLNQTQLRKILAF 181
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIHAATMVAAGV---FLVArmypvFEQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAY 321
|
....*....
gi 733386449 182 SSISHLGWM 190
Cdd:PRK07376 322 STISQLGYM 330
|
|
| |
