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Conserved domains on  [gi|769829442|ref|YP_009128367|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Tribolium confusum]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 2-90 4.51e-20

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 76.73  E-value: 4.51e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442  2 LMYKFIGLFMFISGLLVFSMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLGEEYFFSMVFLTFSVCEGVLGLSILVSLIR 81
Cdd:MTH00162  1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                ....*....
gi 769829442 82 SHGNDYFQS 90
Cdd:MTH00162 81 SHGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 2-90 4.51e-20

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 76.73  E-value: 4.51e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442  2 LMYKFIGLFMFISGLLVFSMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLGEEYFFSMVFLTFSVCEGVLGLSILVSLIR 81
Cdd:MTH00162  1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                ....*....
gi 769829442 82 SHGNDYFQS 90
Cdd:MTH00162 81 SHGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-94 3.08e-07

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 44.09  E-value: 3.08e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442   3 MYKFIGLFMFISGLLVFsMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLG--EEYFFSMVFLTFSVCEGVLGLSILVSLI 80
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGL-LLRRNLLRVLLSLELMLNAVNLALVLFGRLTAdpLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....
gi 769829442  81 RSHGNDYFQSFSLL 94
Cdd:pfam00420 80 RTHGTDDVDSLNLL 93
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 2-90 4.51e-20

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 76.73  E-value: 4.51e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442  2 LMYKFIGLFMFISGLLVFSMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLGEEYFFSMVFLTFSVCEGVLGLSILVSLIR 81
Cdd:MTH00162  1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                ....*....
gi 769829442 82 SHGNDYFQS 90
Cdd:MTH00162 81 SHGNDYFSS 89
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-94 3.05e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 54.47  E-value: 3.05e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442  1 MLMYKFIGLFMFISGLLVFSMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLGEEYFFSMVFLTFSVCEGVLGLSILVSLI 80
Cdd:MTH00149  2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLI 81

                        90
                ....*....|....
gi 769829442 81 RSHGNDYFQSFSLL 94
Cdd:MTH00149 82 RLHGNDYVSSLSSL 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 6-93 1.85e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 52.67  E-value: 1.85e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442  6 FIGLFMFISGLLVFSMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLGEEYFFSMVFLTFSVCEGVLGLSILVSLIRSHGN 85
Cdd:MTH00188  7 LVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHGS 86


                ....*...
gi 769829442 86 DYFQSFSL 93
Cdd:MTH00188 87 DYVSSLNL 94
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-94 4.09e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 51.77  E-value: 4.09e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442  1 MLMYKFIGLFMFISGLLVFSMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLGEEYFFSM--VFLTFSVCEGVLGLSILVS 78
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMpiILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*.
gi 769829442 79 LIRSHGNDYFQSFSLL 94
Cdd:MTH00125 81 TTRTHGSDHLKNLNLL 96
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-94 5.19e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 46.14  E-value: 5.19e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442  1 MLMYKFIGLFMFISGLLVFSMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLGEEYFFS--MVFLTFSVCEGVLGLSILVS 78
Cdd:MTH00067  1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSlpMFMLTFSACEASTGLALMVA 80

                        90
                ....*....|....*.
gi 769829442 79 LIRSHGNDYFQSFSLL 94
Cdd:MTH00067 81 TTRTHGTDHLKNLNLL 96
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-94 3.08e-07

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 44.09  E-value: 3.08e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442   3 MYKFIGLFMFISGLLVFsMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLG--EEYFFSMVFLTFSVCEGVLGLSILVSLI 80
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGL-LLRRNLLRVLLSLELMLNAVNLALVLFGRLTAdpLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....
gi 769829442  81 RSHGNDYFQSFSLL 94
Cdd:pfam00420 80 RTHGTDDVDSLNLL 93
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 12-94 3.88e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 43.80  E-value: 3.88e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442 12 FISGLLVFSMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLGEEYFFS--MVFLTFSVCEGVLGLSILVSLIRSHGNDYFQ 89
Cdd:MTH00126 12 FILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAapMLLLAFSACEASAGLALLVATARTHGTDRLQ 91


                ....*
gi 769829442 90 SFSLL 94
Cdd:MTH00126 92 NLNLL 96
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-94 2.42e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 41.83  E-value: 2.42e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442  1 MLMYKFIGLFMFISGLLVFSMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLGEEYF--FSMVFLTFSVCEGVLGLSILVS 78
Cdd:MTH00043  1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNlsFSLLLLTLSACEASIGLSLMVL 80

                        90
                ....*....|....*.
gi 769829442 79 LIRSHGNDYFQSFSLL 94
Cdd:MTH00043 81 LSRNHNSDLVASLNLL 96
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 6-94 4.71e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 41.08  E-value: 4.71e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442  6 FIGLFMFISGLLVFSMKRKHLLLMLLSLEFIVLSIYLIL--FIYLSFLGEEYFFSMVFLTFSVCEGVLGLSILVSLIRSH 83
Cdd:MTH00181  3 FVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLalFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNRTH 82

                        90
                ....*....|.
gi 769829442 84 GNDYFQSFSLL 94
Cdd:MTH00181 83 GSDHLLKFNLL 93
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 6-92 9.80e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 40.50  E-value: 9.80e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829442  6 FIGLFMFISGLLVFSMKRKHLLLMLLSLEFIVLSIYLILFIYLSFLGE-EYFFSMVFLTFSVCEGVLGLSILVSLIRSHG 84
Cdd:MTH00013  6 FILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLMFANQvNGMLAIVLLTFGACEASLGLSLLVLMTRSYG 85


                ....*...
gi 769829442 85 NDYFQSFS 92
Cdd:MTH00013 86 NDMLKSLT 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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