|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-574 |
6.48e-170 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 495.24 E-value: 6.48e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 1 MVKIIMIFVPMLLASFKMKKYlvNFKSMKINSLLFCIISIILViHNHMGVTCLGGGWLNG-----NFLISWDFYSLVFLF 75
Cdd:MTH00211 10 LLILILLLLPLLLPLNNSKLH--IKKAVKLSFFISLIPLLIFL-DQGLETILTNWSWINLglfslNLSFKFDFYSIFFTS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 76 IGFSVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQA 155
Cdd:MTH00211 87 VALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 156 MIYNRIGDFCFYIGIFLIFMSGMNVNIIGGYGNSqILNNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSST 235
Cdd:MTH00211 167 VIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILN-LDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSST 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 236 MVVAGVYLLCRLLGFF--NFTMMGIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCM 313
Cdd:MTH00211 246 MVVAGVFLLIRLSPLFqnNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICT 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 314 HAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLNSFGSLL 393
Cdd:MTH00211 326 HAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLL 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 394 VIVGSIFTVAYSFRLVSLIFLVNNNEGSFSVKLNGQeqlNTTFFFMSRLFIWGMVGGFFTFWSLFFIFNEE-YIGWGMKM 472
Cdd:MTH00211 406 TLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENY---KLLKNPLKRLALGSILAGFIITSNLPPEKPEIlSLPFLLKL 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 473 IPLMIFGIGVIIGSKIFLGV-----LMEFSPNSQLLFYNPVIHRLQLMLLFNGIKF-------MKFIEFWGMEMLWVNQL 540
Cdd:MTH00211 483 MPLLVTIVGLLLGLELVNLThkqlkTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTlsthlmdLGWYEKLGPKGLGVNQK 562
|
570 580 590
....*....|....*....|....*....|....*
gi 1182637058 541 KKIPKFSAFGKNFL-SYKNYFIFGMFFMCIFFLFY 574
Cdd:MTH00211 563 KLIKLVTSPQQGLIkSYLALLLLSLLLILLLFLLF 597
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
4-415 |
1.12e-111 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 346.00 E-value: 1.12e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 4 IIMIFVPMLLASFKMKKYLVNFKSMKINSLLFCIISIILVIHNHMGVTCLGGGWLN-GNFLIS----WDFYSLVFLFIGF 78
Cdd:MTH00004 15 ILLTPILLPLLSKNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFtTTFNIPisfkLDQYSLMFLPIAL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 79 SVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIY 158
Cdd:MTH00004 95 FVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIY 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 159 NRIGDfcfyIGIFLIfMSGMNVNIiggygNS----QIL-NNFVFFFFLIGMMA----KSSLYFFHPWLPNAMEGPTPVSA 229
Cdd:MTH00004 175 NRIGD----IGLILS-MAWLAMTL-----NTweiqQLFsPTQTPTLPLLGLILaatgKSAQFGLHPWLPAAMEGPTPVSA 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 230 LLHSSTMVVAGVYLLCRLLGFF--NFTMMGIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVS 307
Cdd:MTH00004 245 LLHSSTMVVAGIFLLIRTHPLLqnNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLA 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 308 FFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKM-----MMGSISSkfsklCMILCSLSLGGFPFMSGFYSKDSILENLY 382
Cdd:MTH00004 325 FLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMgglqkTLPITSS-----CLTIGNLALMGTPFLSGFYSKDTIIETLN 399
|
410 420 430
....*....|....*....|....*....|...
gi 1182637058 383 GPFLNSFGSLLVIVGSIFTVAYSFRlvsLIFLV 415
Cdd:MTH00004 400 TSYLNAWALLLTLLATSFTAAYSLR---MILLV 429
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
53-506 |
2.95e-98 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 311.91 E-value: 2.95e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 53 LGGGWLNGNFLISWDFYSLVFLFIGFSVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVG 132
Cdd:MTH00208 92 LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVG 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 133 IMSFLLINWWFGRGEAGLSGLQAMIYNRIGD--FCFYIGIFLIFMSGMNVN-IIGGYGNSQILNNFVFFFFLIGMMAKSS 209
Cdd:MTH00208 172 FLSFLLISWWTTRNDANSSALQAVIYNRIGDigIILFLSLSLINFNSWNLNeILSLNNSNSFLINILLFGILLAAAGKSA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 210 LYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNF--TMMGIVMLVGALTMLYGSICALGQYDMKKIIAHS 287
Cdd:MTH00208 252 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNspWFLSLCLILGSLTALFAASTAISQHDIKKIIAYS 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 288 TTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSISSKFSKLCMILCSLSLGGFPF 367
Cdd:MTH00208 332 TTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPF 411
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 368 MSGFYSKDSILENLYGPFLNSFGSLLVIVGSIFTVAYSFRLVSLIFLVNNNEGSFSvklNGQEQLNTTFFFMSRLFIWGM 447
Cdd:MTH00208 412 LAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLS---PISEENPNLTNPLLRLAIGTI 488
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1182637058 448 VGGFFtFWSLFFIFNEEYIGWGMKMIPLMIFGIGVIIGSKIFLGVLMEFSPNSQLLFYN 506
Cdd:MTH00208 489 ISGWF-FSNFVFNLPPLTLPLILKSLPLIVTIIGAAFSFSFLLSLSSNPINSNFFSFLS 546
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-512 |
2.14e-96 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 306.06 E-value: 2.14e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 1 MVKIIMIFVPMLLASFKMKKYLVNfKSMKInSLLFCIISIILVIHNHMGVTCLGGGWLN-GNFLIS----WDFYSLVFLF 75
Cdd:MTH00066 12 ILSLLLLILPLLLPKSNNFHTNVK-TSVKT-AFFISLIPLMIFINQGLESITTSFHWMNiFNFNINssfkFDQYSIIFLP 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 76 IGFSVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQA 155
Cdd:MTH00066 90 IALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQA 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 156 MIYNRIGDFCFYIGIFLIFMSGMNVNIiggygnSQI-LNNFVFFFFLIGM----MAKSSLYFFHPWLPNAMEGPTPVSAL 230
Cdd:MTH00066 170 VLYNRVGDIGLILSMAWLAMNTNSWEL------QQIfLLNDNSTLPLLGLilaaAGKSAQFGLHPWLPAAMEGPTPVSAL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 231 LHSSTMVVAGVYLLCRLLGFF--NFTMMGIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSF 308
Cdd:MTH00066 244 LHSSTMVVAGIFLLIRFHPLLenNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAF 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 309 FHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLNS 388
Cdd:MTH00066 324 FHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNS 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 389 FGSLLVIVGSIFTVAYSFRlvsLIFLVNNNEGSFSVKLNGQEQLNTTFFFMSRLFIWGMVGGFFTFWSLFFIFNEEY-IG 467
Cdd:MTH00066 404 WALILTLIATSFTAVYSFR---IIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILtMP 480
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 1182637058 468 WGMKMIPLMIFGIGVIIG---SKIFLGVLME---FSPNSQLLFYNPVIHRL 512
Cdd:MTH00066 481 TFMKLAALLVTLLGLLIAldlAKITSKTTPKtkmHSFSNLLAFFPTIIHRL 531
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
67-409 |
6.73e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 294.43 E-value: 6.73e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 67 DFYSLVFLFIGFSVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLINWWFGRG 146
Cdd:MTH00137 87 DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRA 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 147 EAGLSGLQAMIYNRIGDfcfyIGifLIF-MSGMNVNIiggygNS----QIL---NNFVFFFFLIGMM----AKSSLYFFH 214
Cdd:MTH00137 167 DANTAALQAVIYNRVGD----IG--LILaMAWMATNL-----NSweiqQIFalsKDFDLTLPLLGLIlaatGKSAQFGLH 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 215 PWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRL--LGFFNFTMMGIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQL 292
Cdd:MTH00137 236 PWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLspLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQL 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 293 GLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKM-----MMGSISSkfsklCMILCSLSLGGFPF 367
Cdd:MTH00137 316 GLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMgglhhLTPFTSS-----CLTIGSLALTGTPF 390
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1182637058 368 MSGFYSKDSILENLYGPFLNSFGSLLVIVGSIFTVAYSFRLV 409
Cdd:MTH00137 391 LAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVV 432
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
67-414 |
8.89e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 278.27 E-value: 8.89e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 67 DFYSLVFLFIGFSVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLINWWFGRG 146
Cdd:MTH00108 83 DYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRT 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 147 EAGLSGLQAMIYNRIGDfcfyIGIFL----------------IFMSGMNVNIIGGYGnsqilnnfvfffFLIGMMAKSSL 210
Cdd:MTH00108 163 DANTAALQAILYNRIGD----IGFILamawfllnlnswdlqqIFMLNPNNSNLPLMG------------LLLAATGKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 211 YFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRL--LGFFNFTMMGIVMLVGALTMLYGSICALGQYDMKKIIAHST 288
Cdd:MTH00108 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFhpLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFST 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 289 TSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSISSKFSKLCMILCSLSLGGFPFM 368
Cdd:MTH00108 307 SSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1182637058 369 SGFYSKDSILENLYGPFLNSFGSLLVIVGSIFTVAYSFRLVSLIFL 414
Cdd:MTH00108 387 TGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALL 432
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
120-491 |
3.42e-81 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 266.25 E-value: 3.42e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 120 NLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNIiggygnSQILNNFVFFF 199
Cdd:COG1009 132 NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF------SELLAAAPTIL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 200 F-----------LIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTM--MGIVMLVGALT 266
Cdd:COG1009 206 SsplltlillllLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPvwLTVVAIIGAIT 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 267 MLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIgGLQDYRKmmMGSI 346
Cdd:COG1009 286 ALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRK--MGGL 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 347 SSK--FSKLCMILCSLSLGGFPFMSGFYSKDSILENLY-GPFLNSFGSLLVIVGSIFTVAYSFRLVSLIFLvnnneGSFS 423
Cdd:COG1009 363 RKKmpITAITFLIGALSLAGIPPFAGFFSKEAILEAALeAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFF-----GKPR 437
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 424 VKLNgqEQLNTTFFFMSR-------------LFIWGMVGGFFTFWSLFFIFNEEYIGWGMKMIPLMIFGIGVIIGSKIFL 490
Cdd:COG1009 438 PKTP--KHPHESPWLMTLplvvlavlslvlgLLLPGLLEGLLAPAAVLGGELHLAHGLLLNALPLLLSLLGIALGYLLYL 515
|
.
gi 1182637058 491 G 491
Cdd:COG1009 516 K 516
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
120-413 |
2.51e-71 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 240.45 E-value: 2.51e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 120 NLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFM-------SGMNVNIIGGYGNSQIL 192
Cdd:PRK06590 136 NLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAefgslnyDEVFAAAPQFFGLGWSA 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 193 NNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNF--TMMGIVMLVGALTMLYG 270
Cdd:PRK06590 216 LTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELspEALLFVAIVGAVTALFA 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 271 SICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKmmMGSISSK- 349
Cdd:PRK06590 296 AFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRK--MGGLRKKm 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1182637058 350 -FSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFlNSFGSLLVIVGSIFTVAYSFRLVSLIF 413
Cdd:PRK06590 374 pVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRLIFLVF 437
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
60-529 |
1.87e-70 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 237.95 E-value: 1.87e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 60 GNFLISWDFY----SLVFLFIGFSVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMS 135
Cdd:TIGR01974 71 GGFQVDFGLRldglSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCS 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 136 FLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVN----IIGGYGNSQILNNFVFFFFLIGMMAKSSLY 211
Cdd:TIGR01974 151 YLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNfqevFALAPGAFFSALTLICLLLFIGAMGKSAQL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 212 FFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFN--FTMMGIVMLVGALTMLYGSICALGQYDMKKIIAHSTT 289
Cdd:TIGR01974 231 PLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFElsPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTM 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 290 SQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSISSKFSKLCMILCSLSLGGFPFMS 369
Cdd:TIGR01974 311 SQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFA 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 370 GFYSKDSILENLYGPFLNSFGSLLVIVGSIFTVAYSFRlvsLIFLVNNNEGSFSVKLNGQEQLNTTFFFMSRLFIWGMVG 449
Cdd:TIGR01974 391 GFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFR---LIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFA 467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 450 GFF-----TFWSLFFIFNEEYIGWGMKMIPLMIFGIGVIIGSKIFLGVLMeFSPNSQLLFYNPVIHRLQLMLLFNGIKFM 524
Cdd:TIGR01974 468 GFFivplfEFLKGVLPTSAEPALEHHHVPALEIWSPTAVAILGILLAYLL-YLGNPTLPAKIAQRHSGLYRLLLNKWYFD 546
|
....*
gi 1182637058 525 KFIEF 529
Cdd:TIGR01974 547 ELYDK 551
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
117-418 |
4.78e-67 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 228.81 E-value: 4.78e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 117 SSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNV------NIIGGYGNSQ 190
Cdd:MTH00020 129 TSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLdfssvfNMVVSAPSSD 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 191 IlnNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNF--TMMGIVMLVGALTML 268
Cdd:MTH00020 209 I--TLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQapLALIIVTIVGSLTVF 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 269 YGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSISS 348
Cdd:MTH00020 287 FAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFL 366
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 349 KFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLNSFGSLLVIVGSIFTVAYSFRLVSLIFLVNNN 418
Cdd:MTH00020 367 PLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTN 436
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
18-576 |
6.61e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 225.02 E-value: 6.61e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 18 MKKYLVNFKSMKINSLLFCIISIILVIHNHMGVTCLGGGWLNG---NFLISWDFYSLVFLFIGFSVTWSILDFANWYMGA 94
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSssiVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 95 EVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLInWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIF 174
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 175 MSGM-NVNIIGGYGNSQILNNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRL-LGFFN 252
Cdd:MTH00165 160 NFGSwNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFnNLLFS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 253 FTMMGIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGI 332
Cdd:MTH00165 240 SFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNM 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 333 GGLQDYRKMMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLNSFGSLLVIVGSIFTVAYSFRLVSLI 412
Cdd:MTH00165 320 SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYS 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 413 FLVNNNEGSFSVKLNGQEQLNttfFFMSRLFIWGMVGGFFTFWSLFFIFNEEYIGWGMKMIPLMIFGIGVIIGSKIFlgv 492
Cdd:MTH00165 400 MSGDFNLKSLNNLSDESKFML---KSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELS--- 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 493 LMEFSPNSQLLFYNPVIHRLQLM--------------LLFNGIKFMKFIEFWGMEMLWVNQLKKIPKFSAFGKNFLSYKN 558
Cdd:MTH00165 474 LMSLSYNLKSLKNYKLSSFLGSMwfmpflstygisyyPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNN 553
|
570
....*....|....*...
gi 1182637058 559 YFIFGMFFMCIFFLFYFM 576
Cdd:MTH00165 554 LKIYLLSFLLWMIILLLL 571
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
61-576 |
6.31e-65 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 222.03 E-value: 6.31e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 61 NFLISWDFYSLVFLFIGFSVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLIN 140
Cdd:MTH00151 47 SFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVI 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 141 WWFGRGEAGlSGLQAMIYNRIGDFCFYIGIFLIFMSGMnVNIIGGYGNSQILNnfVFFFFLIGMMAKSSLYFFHPWLPNA 220
Cdd:MTH00151 127 YYQNKKSLS-AGMLTALTNRIGDVLILLSIALLVLLGH-WSILSMWDFKLSGW--LGLLLVLAAMTKSAQIPFSSWLPAA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 221 MEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTMMGIVMLV--GALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVT 298
Cdd:MTH00151 203 MAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLfiSLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 299 LGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSIL 378
Cdd:MTH00151 283 LGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 379 ENLYGPFLNSFGSLLVIVGSIFTVAYSFRLVSLIFLVNNNEGSFSvklNGQEQLNTTFFFMSRLFIWGMVGGFFtFWSLF 458
Cdd:MTH00151 363 ESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLS---SKSDEDFYVSLPMLLLSLGALIGGKL-LQSLF 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 459 FIFNEE-YIGWGMKMIPLMIFGIGVIIGSKIFLGVLMEF------SPNSQLLFYNP-VIHRLQLMLLFNGIKFMKFIEFW 530
Cdd:MTH00151 439 EGFSEEfFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSkmvklsFFFSSMWFLSPlSSQPLKSLSLKLSNSSMKSLDMG 518
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1182637058 531 GMEML-WVNQLKKIPKFSAFGKNFLSYKNYFIFGMFFMCIFFLFYFM 576
Cdd:MTH00151 519 WLEILgGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
117-418 |
1.99e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 213.72 E-value: 1.99e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 117 SSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIF--MSGMNVNIIGGYGNSQILNN 194
Cdd:MTH00210 129 TSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILkeFGTLEFSTISSLLVTNINKE 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 195 FVFFFFL---IGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTMMG--IVMLVGALTMLY 269
Cdd:MTH00210 209 SLTIICLllfIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLAltIVTILGALTAFF 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 270 GSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKM--MMGSIS 347
Cdd:MTH00210 289 AATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMggLIKSIP 368
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1182637058 348 skFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLNSFGSLLVIVGSIFTVAYSFRLVSLIFLVNNN 418
Cdd:MTH00210 369 --FTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTN 437
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
18-576 |
3.62e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 209.12 E-value: 3.62e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 18 MKKYLVNFKSMKINSLLFCIISIILVIHNHMgvtcLGGGWLNGNFLISWDFYSLVFLFIGFSVTWSILDFANWYMGAEVK 97
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWEL----LSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 98 NKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGlSGLQAMIYNRIGDFCFYIGIFLIFMSG 177
Cdd:MTH00209 82 KKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLS-AGMLTALTNRVGDALLILSIAWMLMHG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 178 mNVNIIGGYGNSQIlNNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTMM- 256
Cdd:MTH00209 161 -NWNIFYLNFNSNL-GSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFf 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 257 -GIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGL 335
Cdd:MTH00209 239 sMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 336 QDYRKMMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLNSFGSLLVIVGSIFTVAYSFRLVSLIFLV 415
Cdd:MTH00209 319 QDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWG 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 416 NNNEGSFSvklNGQEQLNTTFFFMSRLFIWGMVGGFFTFWSLFFIFNEEYIGWGMKMIPLMIFGIGVIIG------SKIF 489
Cdd:MTH00209 399 PNSSKSLN---SSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMymvlkkNFFL 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 490 LGVLMEFSPNSQLLFYNPVIHRLQLMLLFNGIKFM-KFIEFWGMEMLWVNQLKKIPKFSaFGKNFLSYKNYFIFGMFFMC 568
Cdd:MTH00209 476 IKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMlKLLDQGWVEKMSGQGSFKVLKKS-SKLSQIIQNNSLKLFVTFMM 554
|
....*...
gi 1182637058 569 IFFLFYFM 576
Cdd:MTH00209 555 LILLGVIL 562
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
121-510 |
1.48e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 194.21 E-value: 1.48e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 121 LVFLLIGWEGVGIMSFLLINWWFGRGEAGlSGLQAMIYNRIGDFCFYIGIFLIFMSGmNVNIIGGYGNSqiLNNFVFFFF 200
Cdd:MTH00207 110 LMILLLGWDGLGLVSFILVIYYQNPKSLG-AGMITALTNRIGDVMLLLSIGWTLNQG-HWSITNMWQTD--MNNYIALSI 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTMM--GIVMLVGALTMLYGSICALGQY 278
Cdd:MTH00207 186 MIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWfnPALLLTASLTMLMAGLSAMTEC 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 279 DMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSISSKFSKLCMILC 358
Cdd:MTH00207 266 DMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIA 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 359 SLSLGGFPFMSGFYSKDSILE-NLYGPfLNSFGSLLVIVGSIFTVAYSFRLVSLIFLVNNNEGSFSVKLNGQEQLNTTff 437
Cdd:MTH00207 346 NLALCGSPFLSGFYSKDLILEsSLFYP-HNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTP-- 422
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1182637058 438 fMSRLFIWGMVGGFFTFWSLFFIFNEEYIGWGMKMIPLMIfgigVIIGSKIFLGVLMEFSPNSQLLFYNPVIH 510
Cdd:MTH00207 423 -MLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLV----VTLGALLAWLFTTPNITKTPLLINNPLSH 490
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
118-422 |
1.04e-49 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 182.53 E-value: 1.04e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 118 SINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIF-------MSGMNVNIIGGYGNSQ 190
Cdd:PRK07376 141 SPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFwatgsfdFDGIADRLSELVSSGA 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 191 ILNNFVFFFFLI---GMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNF--TMMGIVMLVGAL 265
Cdd:PRK07376 221 VSGWLALLLCILvflGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQfpAVMTVIAWTGAI 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 266 TMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGL--------QD 337
Cdd:PRK07376 301 TAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQD 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 338 YRkmMMGSISSK--FSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLnsfgsLLVIVGSI---FTVAYSFRLVSLI 412
Cdd:PRK07376 381 MR--LMGGLRKYmpITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANP-----ALWFVGFLtagMTAFYMFRMYFLT 453
|
330
....*....|
gi 1182637058 413 FlvnnnEGSF 422
Cdd:PRK07376 454 F-----EGEF 458
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
66-382 |
3.92e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 172.45 E-value: 3.92e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 66 WDFYSLVFLFIGFSVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLINWWFGR 145
Cdd:MTH00032 78 YDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 146 GEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNII---GGYGNSQILNNFVFFF----------------FLIGMMA 206
Cdd:MTH00032 158 IQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLtfnGGSVGSGIMDRGYYGGgayesplapfaiigilLLIGCIG 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 207 KSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFN---FTMMgIVMLVGALTMLYGSICALGQYDMKKI 283
Cdd:MTH00032 238 KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEkapLTLL-IITIFGALTAFFAATVGLVQNDLKKV 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 284 IAHSTTSQLGLMVVTLGF-GFPLVSFFHLCMHAYVKSLIFISSGIFIHGIG-GLQDYRKMMMGSISSKFSKLCMILCSLS 361
Cdd:MTH00032 317 IAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFS 396
|
330 340
....*....|....*....|.
gi 1182637058 362 LGGFPFMSGFYSKDSILENLY 382
Cdd:MTH00032 397 IMGLPYLTGFYSKDLILELTY 417
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
116-446 |
7.42e-44 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 166.61 E-value: 7.42e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 116 TSSiNLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGI---------------FLIFMsgmnv 180
Cdd:CHL00025 140 TSS-NLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGIlgfywitgsfefrdlFEIFN----- 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 181 NIIGGYGNSQILNNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFT--MMGI 258
Cdd:CHL00025 214 NLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIpyIMNL 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 259 VMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDY 338
Cdd:CHL00025 294 ISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGY 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 339 RKM------MMGSISSK--FSKLCMILCSLSLGGFPFMSGFYSKDSILEN--LYGPFLNSFGSLlvIVGsiFTVAYSFRL 408
Cdd:CHL00025 374 SPDksqnmvLMGGLRKYmpITKTTFLLGTLSLCGIPPLACFWSKDEILNDswLYSPIFAIIAWS--TAG--LTAFYMFRI 449
|
330 340 350
....*....|....*....|....*....|....*....
gi 1182637058 409 VSLIFlvnnnEGSFSV-KLNGQEQLNTTFFFMSrlfIWG 446
Cdd:CHL00025 450 YLLTF-----EGHLRVhFQNYSGKKNSSFYSIS---LWG 480
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
120-409 |
9.33e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 158.55 E-value: 9.33e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 120 NLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGmnvniiGGYGNSQILNNFVFFF 199
Cdd:PRK12644 127 NLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAA------GTYRLSELLADPPTGP 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 200 F--------LIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTMMGIVMLV--GALTMLY 269
Cdd:PRK12644 201 AvsvavvliLVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLvlGLATMLL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 270 GSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFP---LVSFFHLCMHAYVKSLIFISSGIFIHGIgGLQDYRKmmMGSI 346
Cdd:PRK12644 281 GGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaaLAGLAMLLAHALFKAALFLVVGIIDHST-GTRDIRK--LSGL 357
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1182637058 347 SSKFSKLCMI--LCSLSLGGFPFMSGFYSKDSILEN-LYGPFLNSFGSLL---VIVGSIFTVAYSFRLV 409
Cdd:PRK12644 358 GRRQPVLAVVaaLAAASMAGLPPLLGFVAKEAALEAvLHDGALGPAGPVVlagIVLGSILTVAYSLRFL 426
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
118-414 |
1.61e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 157.66 E-value: 1.61e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 118 SINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIfmsGmnvNIIGGYGNSQILNN--- 194
Cdd:PRK12648 126 SGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLL---G---HIVGSYDLDVVLAAgdl 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 195 --------FVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRL---LG----FFNftmmgIV 259
Cdd:PRK12648 200 irahplypPALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLwpvLAgteeWFW-----IV 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 260 MLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPL---VSFFHLCMHAYVKSLIFISSGIFIH------ 330
Cdd:PRK12648 275 GGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHetgtrd 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 331 --GIGGLqdyRKMMmgsissKFSKLCMILCSLSLGGFPFMSGFYSK----DSILENLYGPFLNSFGSLLVIVGSIFTVAY 404
Cdd:PRK12648 355 mrRLSGL---RRLM------PITATLAMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSLDWLLPVAATLAGAFSVAY 425
|
330
....*....|
gi 1182637058 405 SFRLVSLIFL 414
Cdd:PRK12648 426 SLRFIHDVFF 435
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
61-576 |
3.62e-40 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 153.53 E-value: 3.62e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 61 NFLISWDFYSLVFLFIGFSVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLIN 140
Cdd:MTH00095 38 SLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 141 WWfGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMnvniigGYGNSQILNNFVFFFFLIGMMAKSSLYFFHPWLPNA 220
Cdd:MTH00095 118 FY-NNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSY------YFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKA 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 221 MEGPTPVSALLHSSTMVVAGVYLL-CRLLGFFNFTMMGIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTL 299
Cdd:MTH00095 191 MSAPTPVSSLVHSSTLVTAGLILLmNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTF 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 300 GFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILE 379
Cdd:MTH00095 271 GSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILE 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 380 NLYGPFLNSFGSLLVIVGSIFTVAYSFRLVSLIFLVNNNEGSFSVKLNGQEQLNTTFFFMSRLFIWGMVGGFFTFWSLFF 459
Cdd:MTH00095 351 LFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSVLMNFLSLMLVFFSVFFLWWLNFNLLNLPSLFL 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 460 IFNeeyigwgmKMIPLMIFGIGVIIGSKIFLGVLMEFSPNSQLLFYNPVIHRLQLMLLFNGIKFMKFIEFWgmemlwvnq 539
Cdd:MTH00095 431 YLD--------FYVPLFYLFMIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLKFFDLFLNKFGYKG--------- 493
|
490 500 510
....*....|....*....|....*....|....*..
gi 1182637058 540 lkkIPKFSAFGKNFLSYKNYFIFGMFFMCIFFLFYFM 576
Cdd:MTH00095 494 ---FNFFSSFSFFFFSYMKSFKYNSLLILLFLIFLFL 527
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
120-425 |
4.67e-39 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 152.99 E-value: 4.67e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 120 NLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNIIGGYGNSQILNNF---- 195
Cdd:PRK12646 131 NTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHglfi 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 196 -VFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCR---LLGFFNFTMMgIVMLVGALTMLYGS 271
Cdd:PRK12646 211 pMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRftpLLGLSNMYIY-IVTFVGLITMLFGS 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 272 ICALGQYDMKKIIAHSTTSQLGLMVVTLGFG--------------FPLVSF---FHLCMHAYVKSLIFISSGIFIHGiGG 334
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHE-AG 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 335 LQDYRKmmMGSISSKFSK--LCMILCSLSLGGFPFMSGFYSKDSILENL--------YGPFLNSFGSLLVIVGSIFTVAY 404
Cdd:PRK12646 369 TRDIRI--LSGMRQLFPKmnLVMTIAALSMAGVPFLNGFLSKEMFLDALtqtgqlsqFSLISMIIIVFIGVIASIFTFTY 446
|
330 340
....*....|....*....|.
gi 1182637058 405 SFRLVSLIFLVNNNEGSFSVK 425
Cdd:PRK12646 447 ALYMVKEVFWGKYDSKVFTKK 467
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
118-383 |
6.92e-37 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 138.60 E-value: 6.92e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 118 SINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNI-----IGGYGNSQIL 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFdelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 193 NNFVFFFFLIGMMAKSSLYFFHPWLPNA-MEGPTPVSALLhSSTMVVAGVYLLCRLLGFFNF---TMMGIVMLVGALTML 268
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsspFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 269 YGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPL---VSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGS 345
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....*...
gi 1182637058 346 ISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYG 383
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVA 277
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
120-414 |
1.23e-36 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 145.45 E-value: 1.23e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 120 NLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFmsgmnvNIIGGYGNSQILNNF---- 195
Cdd:PRK12647 116 NLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLG------NVTGTYSLSELLASGdvir 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 196 -------VFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTM--MGIVMLVGALT 266
Cdd:PRK12647 190 ehplylaILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPlwQTILPLFGGLT 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 267 MLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLV---SFFHLCMHAYVKSLIFISSGIFIHG--------IGGL 335
Cdd:PRK12647 270 MLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHEtgtrditkLGGL 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 336 QdyRKMMMGSISSkfsklcmILCSLSLGGFPFMSGFYSKDSILENLYG-PFLNSFGSLLVIVGSIFTVAYSFRLVSLIFL 414
Cdd:PRK12647 350 R--RAMPITAAAA-------LLAALSMAGLPPLFGFLAKELIYEALLEaPLWSLILTVAAVLGNALMVAVAFLVGIKPFL 420
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
120-413 |
1.28e-36 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 145.96 E-value: 1.28e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 120 NLVFLLIGWEGVGIMSFLLINWWFGRGEAGlsGLQAMIYNRIGdfcfyiGIFLIFMSGMNVNIIGGYGNSQILNN----- 194
Cdd:PRK12650 131 DVVVLFVAWELVSLASFFLIARSGSGGEAG--SIRTLILTFFG------GLTLLAAVAIAATQTGTTSLSGILHSdvwae 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 195 ----FVFFFFLIGMMA--KSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTMM--GIVMLVGALT 266
Cdd:PRK12650 203 kpglTTVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVwnWLLIIVGMIT 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 267 MLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPL---VSFFHLCMHAYVKSLIFISSGIFIHGiGGLQDYRKmmM 343
Cdd:PRK12650 283 ALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRR--L 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1182637058 344 GSISSK--FSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLNSFGSLLVI----VGSIFTVAYSFRLVSLIF 413
Cdd:PRK12650 360 GSLWRRmpFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLvgaaLGAVFTFAYSARLVLGAF 435
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
61-413 |
7.08e-35 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 140.37 E-value: 7.08e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 61 NFLISWDFYSLVFLFIGFSVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLIN 140
Cdd:TIGR00940 68 NFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLIS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 141 WWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMsgmnvnIIGGYG-------NSQILNN----FVFFFFLIGMMAKSS 209
Cdd:TIGR00940 148 YWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGK------ITGSFSidaviasADAIRNSplfgTAMVLVLLGAFTKSA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 210 LYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFT--MMGIVMLVGALTMLYGSICALGQYDMKKIIAHS 287
Cdd:TIGR00940 222 QFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTeaWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 288 TTSQLGLMVVTLGFGFPLVSF----------------FHLCMHAYVKSLIFISSGIFIHGiGGLQDYRKMMMGSISSKFS 351
Cdd:TIGR00940 302 TISQLGLIMVLLGLGSPSYHYqgddskiyalaavaavFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPIT 380
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1182637058 352 KLCMILCSLSLGGFPFMSGFYSKDSILE-----NLYGPF----LNSFGSLLVIVGSIFTVAYSFRLVSLIF 413
Cdd:TIGR00940 381 FTLAMIASAAMAGVPPFNGFLSKEMFFAeaitaHLVNPFdtvtLGYLFPYVATVASVFTFVYSLRFIHGVF 451
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
118-414 |
1.51e-34 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 139.29 E-value: 1.51e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 118 SINLVFLLIGWEGVGIMSFLLINWWFGRgEAGLSGLQ-AMIYNRIGDFCFYIGIFLIFMSGMNVNIIGGYGNSQILNN-- 194
Cdd:PRK12645 129 SDNLIVLYLFWELTSISSFLLISYWYER-EASRYGAQkSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQNsp 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 195 ---FVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTMMGI--VMLVGALTMLY 269
Cdd:PRK12645 208 lfiPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFwtVTLVGLITLFW 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 270 GSICALGQYDMKKIIAHSTTSQLGLMVVTLGFG-------------FPLVSF---FHLCMHAYVKSLIFISSGIFIHGIg 333
Cdd:PRK12645 288 GSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGaaslhyqgddskiYAAAITaaiFHLINHATFKGSLFMIVGIVDHET- 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 334 GLQDYRK----MMMGSISSKFSklcmILCSLSLGGFPFMSGFYSKDSILENL-----YGPF-LNSFGSLLVI---VGSIF 400
Cdd:PRK12645 367 GTRDIRKlgglMTIMPITFTIA----LIGALSMAGLPPFNGFLSKEMFFESMlnateANLFsLDTWGVLFPViawVASVF 442
|
330
....*....|....
gi 1182637058 401 TVAYSFRLVSLIFL 414
Cdd:PRK12645 443 TFVYSIIFIFKTFF 456
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
4-414 |
4.09e-32 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 131.87 E-value: 4.09e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 4 IIMIFVPMLLASF-----KMKKYLVNFKSMKINSLLFCIISIILVIHNHMGVTCLGGGWLNG---NFLISWDFYSLVFLF 75
Cdd:PRK12649 8 VLAIFLPFILAWTvpvleKVLKQRIGWFAAAIAFTSFALIAQVAPEVIHGTIITGSISWLPSagvEFSIYADGLAVLIGL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 76 IGFSVTWSILDFANWYMGAEVKNKTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQA 155
Cdd:PRK12649 88 IASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKS 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 156 MIYNRIGDFCFYIGIFLIFmsgmnvNIIGGYGNSQILNN--------------FVFFFFLIGMMAKSSLYFFHPWLPNAM 221
Cdd:PRK12649 168 LLITAGGGLFMFAGFLLLH------VITGTYDIATILQDselienikghplflITLILIFIGAAAKSAQGPFYIWLPNAM 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 222 EGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTMMGIVML--VGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTL 299
Cdd:PRK12649 242 EAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVsgTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMY 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 300 GF--------GFPLVSfFHLCMHAYVKSLIFISSGIFIHGiGGLQDYRKmmMGSISSKFSKLCMILC--SLSLGGFPFMS 369
Cdd:PRK12649 322 GYttyhepglGVAAAT-FHLLNHATFKACLFLVAGIVAHE-AATRDIRK--LGGLRKEMPITFIVASiaALAMAGIPPLN 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1182637058 370 GFYSKDSILEN-------LYGPFLNSFGSLLViVGSIFTVAYSFRLVSLIFL 414
Cdd:PRK12649 398 GFLSKEMFYETsvemgalIGGPFTIIIPAVAV-LGGVFTFAYSIKLIDGIFL 448
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
120-412 |
1.15e-31 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 127.19 E-value: 1.15e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 120 NLVFLLIGWEGVGIMSFLLINWWfGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNIIGGYGNSQILNNFVFFF 199
Cdd:COG0651 128 DLFNLFVFFEVMLLASYGLVALG-GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLA 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 200 ----FLIGMMAKSSLYFFHPWLPNAM-EGPTPVSALLhSSTMVVAGVYLLCRLL-----GFFNFTMMGIVMLVGALTMLY 269
Cdd:COG0651 207 afalLLVGFGIKAALFPLHFWLPDAYpAAPSPVSALL-SGLLTKVGVYAILRVLtllfgADPALFLGTLLLVLGLLTMLV 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 270 GSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLV---SFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRkmmMGSI 346
Cdd:COG0651 286 GALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATGTRDLDK---LGGL 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1182637058 347 SSK--FSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFlNSFGSLLVIVGSIFTVAYSFRLVSLI 412
Cdd:COG0651 363 GKRmpLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAG-AWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
118-382 |
1.64e-30 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 124.70 E-value: 1.64e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 118 SINLVFLLIGWEGVGIMSFLLINWwFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNIIGGYGNSQILNNFVF 197
Cdd:PRK06525 132 SSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVF 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 198 FFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFN-----FTMMGIVMLVgaLTMLYGSI 272
Cdd:PRK06525 211 LGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGpiphvIGYVGAVMAI--VTLLYGFL 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 273 CALGQYDMKKIIAHSTTSQLGLMVVTLG---FGFPL---VSFFHLCMHAYVKSLIFISSGIFIHGIGGLqdyrkmMMGSI 346
Cdd:PRK06525 289 MYLPQQDMKRLLAYSTITQLGYMFFGLSlaiLGSRLaleGSIAYIFNHAFAKSLFFLVAGALSYSCGTR------LLPRL 362
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1182637058 347 SSKFSKL-----CMILCSLSLGGFPFMSGFYSKDSILENLY 382
Cdd:PRK06525 363 RGVLKKLplvgvGFCVAALAITGVPPFNGFFSKFPIFAAGF 403
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
144-413 |
4.30e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 111.89 E-value: 4.30e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 144 GRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSG--MNVNIIGGYGNSQILNNFVFFFFLIGMMAKSSLYFFHPWLPNAM 221
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTgtLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 222 EGPTPVSALLHSSTMVVAGVYLLCRL-LGFFNFTMMG------IVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGL 294
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIyFTVFGGDFRFalglgwLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 295 MVVTLGFGFPLV---SFFHLCMHAYVKSLIFISSGIFI--HGIGGLQDYRKMMMgsiSSKFSKLCMILCSLSLGGFPFMS 369
Cdd:PRK08375 310 ILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEvtYGTRRLSELSGLGR---RMPLTAAAFAVASLSLIGVPPTS 386
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1182637058 370 GFYSKDSILENLYGpfLNSFGSLLVIV-GSIFTVAYSFRLVSLIF 413
Cdd:PRK08375 387 GFVSKWYLVVGAVE--AGQWLVLAVLLaSSLLALLYFLRIWYRAF 429
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
117-574 |
3.14e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 106.50 E-value: 3.14e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 117 SSINLVFLLIGWEGVGIMSFLLInWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNIIGgygnsqilnnfv 196
Cdd:MTH00063 94 LTGDFLSTLIFWEYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFLCC------------ 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 197 fFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTMMGIVMLV-GALTMLYGSICAL 275
Cdd:MTH00063 161 -LFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVlLLLTIFITGVSSL 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 276 GQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSISSKFSKLCM 355
Cdd:MTH00063 240 FFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYL 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 356 ILCSLSLGGFPFMSGFYSKDSILENLYGPFLNSFGSLLVIVGSIFTVAYSFRLVSLIFLVNNNeGSFSVKLngqeqlntt 435
Cdd:MTH00063 320 FLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVKSS-LSSGVRF--------- 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 436 FFFMSRLFIwgMVGGFFTFWSLFFIFNEEYIGWGMKMIPLMIFGIGVIIGSKIFLGVLmeFSPNSQLLFYNPVIHRLqLM 515
Cdd:MTH00063 390 LFFNSGLMV--FLWLFINYYVFLLLDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSNL--FSNWSSSLFGCDNLVEL-FY 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1182637058 516 LLFNGIKFMKFIEFWGMEMLWVNQLKKIPKFSAFGKNFLSyKNYFIFGMFFMCIFFLFY 574
Cdd:MTH00063 465 ELFYSILDLVSLFFFRWEIYLIELLCGVGSSSSLLYSWFS-LNLLLLSLFFLLIYLLII 522
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
129-414 |
2.04e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 100.82 E-value: 2.04e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 129 EGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNII---------------GGYGNSQILN 193
Cdd:PRK12667 143 EVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMAdlsakirglsfpltgGLAGNPPLAL 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 194 NFVFFFFLIGMMAKSSLYFFHPWLPNAM-EGPTPVSALLhSSTMVVAGVYLLCR----------LLGFFNFTMMGIVMLV 262
Cdd:PRK12667 223 GVALALALWAFTIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRflytifgispSLIDFRAALSPILIIL 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 263 GALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLV---SFFHLCMHAYVKSLIFISSGIFIHGIGGlQDYR 339
Cdd:PRK12667 302 GAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAAGT-RDID 380
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1182637058 340 KMMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENL--YGPFLnsfGSLLVIVGSIFTVAYSFRLVSLIFL 414
Cdd:PRK12667 381 ELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALleSGFYL---PALVLLIASAISLVGYFRAWYSLFF 454
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
117-381 |
1.76e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 94.63 E-value: 1.76e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 117 SSINLVF-------LLIGWEGVGIMSFLLINwwFGRGEAGL-SGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNIIGgygn 188
Cdd:PRK07234 105 GSVNAAFvcadlisLYVALEVLSIATFLLVA--YPRTDRAIwVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSG---- 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 189 sqILNNFVFFFFLI--GMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFnFTMMGIVMLVGALT 266
Cdd:PRK07234 179 --LATADPEAFALIalGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDV-PGLDLIVRIFGVGT 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 267 MLYGSICALGQYDMKKIIAHSTTSQLGLMVVTlgfgfPLVSFFHLCMHAYVKSLIFISSGIFIHgiGGLQDYRKMMMGsi 346
Cdd:PRK07234 256 ALLGVLFALLEKDLKRMLAFSTISQLGFILAA-----PLVGGLYALAHGLVKSTLFLCAGALPS--RNFTELISQMLG-- 326
|
250 260 270
....*....|....*....|....*....|....*.
gi 1182637058 347 sskFSK-LCMILCSLSLGGFPFMSGFYSKDSILENL 381
Cdd:PRK07234 327 ---IGKwIPLTMASFSIAGFPLLAGFVSKVLTLKNL 359
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
118-425 |
1.02e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 89.11 E-value: 1.02e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 118 SINLVFLLIGWEGVGIMSFLLINW-------WFGRGEAGLSGLQAMIYnrigdfcFYIGIFLIFMSGMNVNIIGGyGNSQ 190
Cdd:PRK06589 135 SSDLFTMFVCYELLTISTAFLIGHtrnnislSGGYKYLKILMISALLL-------FLPAVILIYTKTGNLDFVSG-GLFS 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 191 ILNNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLL----GFFN----FTMMGIVMLV 262
Cdd:PRK06589 207 KNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILlyifGLSYlqriFAEFNWLIFI 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 263 GALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPL---VSFFHLCMHAYVKSLIFISSGIfIHGIGGLQDYR 339
Cdd:PRK06589 287 PIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVD 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 340 KMMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYG---PFLNSFGSLLVIVGSIFTVAYSFRLVSLIFLVN 416
Cdd:PRK06589 366 KLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEqnqPWLSIIVMLVVIASSILSALYLLKILSSIYKPS 445
|
....*....
gi 1182637058 417 NNEGSFSVK 425
Cdd:PRK06589 446 LSENSFITK 454
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
146-419 |
3.70e-17 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 84.43 E-value: 3.70e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 146 GEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNIIGGYGNSQILNNFVFFFFL----IGMMAKSSLYFFHPWLPNAM 221
Cdd:PRK08377 154 GEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQVGLalliFGLAVEAELFPLNAWAPDAY 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 222 EG-PTPVSALLhSSTMVVAGVYLLCRLL-------GFFNFTMMGIVMlvGALTMLYGSICALGQYDMKKIIAHSTTSQLG 293
Cdd:PRK08377 234 QAaPHPITVMF-SAFVVKAGLYAMARILylmqnanGWSSVLKLVIIM--ATLTVFFAELSALRQKNVKRMIAYSSIGQVG 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 294 LMVVTLGFGFPL---VSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSiSSKFSKLCMILCSLSLGGFPFMSG 370
Cdd:PRK08377 311 MIALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGK-RMPLTALALTIGALSTVGIPLFNV 389
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1182637058 371 FYSKDSILENLYGPFlNSFGSLLVIVGSIFTVAYSFRLVSLIFLVNNNE 419
Cdd:PRK08377 390 FWSKFRIILAGLSAG-YTWPVALVLGASVVEAVYYFRLIHTMWFKGEGE 437
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
122-414 |
8.09e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 83.61 E-value: 8.09e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 122 VFLLIgwegVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIF-------MSGMNVNIIGgygNSQILNN 194
Cdd:PRK08376 148 VFLEI----MSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYgqygtlnMAYLAVKMSE---NPTVVAK 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 195 FVFFFFLIGMMAKSSLYFFHPWLPNAM-EGPTPVSALLHSSTmvVAGVYLLCRLL-----GFFNFTMMG-IVMLVGALTM 267
Cdd:PRK08376 221 IALALFIAGLAMKSGAVPVHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARVLfsiygPAINLATVGwVIIILGCLTM 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 268 LYGSICALGQYDMKKIIAHSTTSQLGLMVVTLG-----FGFPLVS----------FFHLCMHAYVKSLIFISSGIFIHGI 332
Cdd:PRK08376 299 FVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGvglaaLGDPAMAsygeialaggIYHIVNHALYKALLFLTAGAVIYET 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 333 gGLQDYRKMMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYgpFLNSFGSLLVIVGSIFTVAYSFRLVSLI 412
Cdd:PRK08376 379 -GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSA--LFNPILGVIAMIGSVLTLASFVKVFHTA 455
|
..
gi 1182637058 413 FL 414
Cdd:PRK08376 456 FF 457
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-371 |
3.91e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 78.05 E-value: 3.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNA-MEGPTPVSALLhsstmvvAGVYLLCRLLGFFNFTMM-----------GIVMLVGALTML 268
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAhSEAPSPVSALL-------SGVLLNVALYAVLRYYILidaaigsdfpgRLLLIFGLLSVL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 269 YGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSF---FHLCMHAYVKSLIFISSGIFihgiggLQDYRKMMMGS 345
Cdd:PRK06458 294 VAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIFFASGNV------LQKYGTRDINV 367
|
170 180 190
....*....|....*....|....*....|....*
gi 1182637058 346 I-----SSKFSKLCMILCSLSLGGFP----FMSGF 371
Cdd:PRK06458 368 IrgllkVSPLTGWGLMLGALAIAGMPpfgvFISEF 402
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
203-409 |
4.70e-15 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 78.41 E-value: 4.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 203 GMMAKSSLYFFHPWLPNAMEGPTPVSaLLHSSTMVVAGVYLLCRLLGFFNF--TMMGIVMLVGALTMLYGSICALGQYDM 280
Cdd:PRK07390 230 GPTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALspVALTVLIVIGTVTAIGASLVAIAQIDI 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 281 KKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGlQDYRKmmMGSISSKF--SKLCMILC 358
Cdd:PRK07390 309 KRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTE--LGGLWSRMpaTTLAFLVG 385
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1182637058 359 SLSLGGFPFMSGFYSKDSILENLYGPFLNSFGSLLVIVG-SIFTVAYSFRLV 409
Cdd:PRK07390 386 SAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNAlTAFNLTRVFRLV 437
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
124-374 |
1.18e-13 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 73.78 E-value: 1.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 124 LLIGWEGVGIMSFLLInwWFGRGEAGLS-GLQAMIYNRIGdfcfyiGIFLIFMSGMNVNIIG--GYGNSQILNNFVFFFF 200
Cdd:PRK12668 118 LFVFWELMAFTSTFLV--WARGTKAAVRaGFRYLLVHVLG------GVLLLAGILLHYAETGsfAFGAIAGLGGTAAWLI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLlgffnFTMMGIVMLVGALTMLYGSICALGQYDM 280
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARA-----FPGTELLIYIGAAMAVYGVFFALLENDL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 281 KKIIAHSTTSQLGLMVVTLGFGFPLV---SFFHLCMHAYVKSLIFISSGIFIHG--------IGGLqdYRKMMMGSIssk 349
Cdd:PRK12668 265 RRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRtgteklteLGGL--YRSMPLTAL--- 339
|
250 260
....*....|....*....|....*
gi 1182637058 350 fskLCMILCsLSLGGFPFMSGFYSK 374
Cdd:PRK12668 340 ---FCLVGA-LSISAFPLFSGFVSK 360
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
201-333 |
6.83e-13 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 71.46 E-value: 6.83e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNAM-EGPTPVSALLhSSTMVVAGVYLLCR----LLGFFNFTMMGIVMLVGALTMLYGSICAL 275
Cdd:PRK06521 217 LFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvvfdLLGAPGWWWGVLVLALGAISAVLGVLYAL 295
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1182637058 276 GQYDMKKIIAHSTTSQLGLMVVTLG-------FGFPLVS-------FFHLCMHAYVKSLIFISSGIFIHGIG 333
Cdd:PRK06521 296 AEHDLKRLLAYSTIENIGIIFVGLGlamvfiaYGMPLLAalaltaaLYHLLNHALFKSLLFLGAGAVLHATG 367
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
116-414 |
4.18e-12 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 68.60 E-value: 4.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 116 TSSINLVFLLIGWEGVGIMSFLLINWWFGRG---EAGL---------SGLqaMIYnrigdfcfyiGIFLIF-MSG-MNVN 181
Cdd:COG1007 119 ASANDLLTLFLGLELLSLSLYVLVAFRRDDRrssEAALkyfllgalsSGF--LLY----------GISLLYgATGsLNLA 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 182 IIGGYGNSQILNNFVFFFFLIGMMA----KSSLYFFHPWLPNAMEG-PTPVSALLhSSTMVVAGVYLLCRLL----GFFN 252
Cdd:COG1007 187 GIAAALAAGGANSPLLLLGLVLVLAglafKLSAVPFHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRLLveafPGLA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 253 FTMMGIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTL----GFGFPLVsFFHLCMHAYVKSLIFISSGIF 328
Cdd:COG1007 266 ADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLaagtPLGVSAA-LFYLLAYLFMNLGAFAVILLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 329 IHGIGG---LQDYRKMmmgSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGpflNSFGSLLVI--VGSIFTVA 403
Cdd:COG1007 345 SRKGGEaeeIEDLAGL---ARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVE---AGLYWLAVIavLNSVISAY 418
|
330
....*....|.
gi 1182637058 404 YSFRLVSLIFL 414
Cdd:COG1007 419 YYLRVVKAMYF 429
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
207-326 |
1.27e-11 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 67.03 E-value: 1.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 207 KSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGvYLLCRLLGFFNFTMMG--IVMLVGALTMLYGSICALGQYDMKKII 284
Cdd:PRK08168 213 KTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGG-FVLIRFAPLLEQAPPArwLLVLVGLATAVLAGLVMLTRISIKVRL 291
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1182637058 285 AHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSG 326
Cdd:PRK08168 292 AWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
118-414 |
1.77e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 66.64 E-value: 1.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 118 SINLVFLLIGWEGVGIMSFLLINWWfGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSG----MNVNIIGGYGNSQILN 193
Cdd:COG1008 130 ALDLFLFYVFWELMLIPMYFLIGIW-GGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAgaltFDIAELAAAPLPLTAQ 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 194 NFVFFFFLIGMMAKSSLYFFHPWLPNA-MEGPTPVSALLhSSTMVVAGVYLLCRllgfFNFTMM--------GIVMLVGA 264
Cdd:COG1008 209 LLLFLAFFIAFAVKVPMFPFHTWLPDAhVEAPTAGSVLL-AGVLLKMGGYGLLR----FALPLFpeasayfaPLLAALGV 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 265 LTMLYGSICALGQYDMKKIIAHSTTSQLGLmvVTLG-FGFPLVSF----FHLCMHAYVKSLIFISSGIF--------IHG 331
Cdd:COG1008 284 IGIIYGALVALAQTDLKRLIAYSSVSHMGF--VLLGiFALNPLGLqgavLQMVSHGLITAALFLLVGVLydrthtrdIAD 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 332 IGGLQDYRKMMMGsisskfsklCMILCSLSLGGFPFMSGFYSKDSILENLYGPflNSFGSLLVIVGSIFTVAYSFRLVSL 411
Cdd:COG1008 362 LGGLAKRMPVLAA---------LFLLAALASLGLPGTSGFVGEFLVLLGAFQV--NPWLAILAALGLILTAAYLLWMYQR 430
|
...
gi 1182637058 412 IFL 414
Cdd:COG1008 431 VFF 433
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-378 |
7.45e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.78 E-value: 7.45e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNA-MEGPTPVSALLhSSTMVVAGVYLLCRLLGFFNFTMMG-----IVMLVGALTMLYGSICA 274
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAeqfsnVLIGLGIFSIAVAAFSM 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 275 LGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSF---FHLCMHAYVKSLIFISSGIfIHgigglQDYRKMMMGSISSKF- 350
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAGI-LH-----RQYRSDRFDRIFDVFr 365
|
170 180 190
....*....|....*....|....*....|..
gi 1182637058 351 ----SKLCMILCSLSLGGFPFMSGFYSKDSIL 378
Cdd:PRK08676 366 lqpvAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
118-400 |
2.67e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 63.21 E-value: 2.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 118 SINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNIIGGYGNSQILnNFVF 197
Cdd:PRK08667 130 SANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIL-SLVF 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 198 FFFLIGMMAKSSLYFFHPWLPNAMEG-PTPVSALLhSSTMVVAGVYLLCR-LLGFFNFTMM-GIVMLV-GALTMLYGSIC 273
Cdd:PRK08667 209 LLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRfLMDVLSPELWwGVLILLaGSISALLGVIY 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 274 ALGQYDMKKIIAHSTTSQLGLMVVTLG-------FGFPLVSF-------FHLCMHAYVKSLIFISSGIFIHGIGGlQDYR 339
Cdd:PRK08667 288 ALKEHDLKGLLAYSSIENIGIILMGIGlyvifgvYGLDTLALlalggalFHSLNHALFKSLLFLTAGSVVHATGT-RNIE 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1182637058 340 KMMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFL---NSFGSLLVIVGSIF 400
Cdd:PRK08667 367 KMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSvadPLIKILLFSVLAIF 430
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
182-425 |
4.88e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 61.94 E-value: 4.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 182 IIGGYGNSQILNNFVFFFFLIGMMA----KSSLYFFHPWLPNAMEG-PTPVSALLhSSTMVVAGVYLLCRLLG----FFN 252
Cdd:CHL00049 198 IVNGLINTQMYNSPGISIALIFITVgigfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFDipfyFSS 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 253 FTMMGIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPlvSFFHLCMHAYVKSLIFISSGIFI--- 329
Cdd:CHL00049 277 NEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDS--NDGYASMITYMLFYIFMNLGTFAciv 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 330 -----HGIGGLQDYRKMMMgsiSSKFSKLCMILCSLSLGGFPFMSGFYSKdsilenLY--------GPFLNSFGSLLVIV 396
Cdd:CHL00049 355 lfglrTGTDNIRDYAGLYT---KDPFLALSLALCLLSLGGIPPLAGFFGK------LYlfwcgwqaGLYFLVSIGLLTSV 425
|
250 260
....*....|....*....|....*....
gi 1182637058 397 GSIFtvaYSFRLVSLIFLVNNNEGSFSVK 425
Cdd:CHL00049 426 ISIY---YYLKIIKLLMTGRNQEITPYVR 451
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
206-413 |
6.45e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 61.50 E-value: 6.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 206 AKSSLYFFHpWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLlgffnFTMM---------GIVMLVGALTMLYGSICALG 276
Cdd:PRK12663 219 MKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRV-----FTLLfpqerellhPLLATMAAITMVIGALGALA 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 277 QYDMKKIIAHSTTSQLGLMVVTLGFGFPLV---SFFHLCMHAYVKSLIFISSGIFIhGIGGLQDYRKMM-MGSISSKFSK 352
Cdd:PRK12663 293 YKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGgLYRKEPLFGA 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1182637058 353 LCMILCsLSLGGFPFMSGFYSKDSILENLYGPFlNSFGSLLVIVGSIFTVAYSFRLVSLIF 413
Cdd:PRK12663 372 LFLILI-FAIGGLPPFSGFWGKVLLVQGALDNG-AYILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
210-379 |
1.89e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 60.35 E-value: 1.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 210 LYFfhpWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFF-----NFTMMgIVMLVGALTMLYGSICALGQYDMKKII 284
Cdd:PRK07691 228 LYF---WLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFfshdtSFTHY-LILILALLTIIFGVIGAVAYFDIKKII 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 285 AHSTTSQLGLMVVTLGFGFPLV---SFFHLCMHAYVKSLIFISSGIFIHgIGGLQDYRKmMMGSISSKFSKLCM-ILCSL 360
Cdd:PRK07691 304 IYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKK-MGGLIKRYPVLGWMfFIAAL 381
|
170
....*....|....*....
gi 1182637058 361 SLGGFPFMSGFYSKDSILE 379
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVE 400
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
201-413 |
2.74e-09 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 59.71 E-value: 2.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNA-MEGPTPVSALLhSSTMVVAGVYLLCRL-LGFFNFTMMGI---VMLVGALTMLYGSICAL 275
Cdd:PRK06473 212 LVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVGLFPEAWVYLapwLATWAVVSVLYGASCAI 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 276 GQYDMKKIIAHSTTSQLGLMVVTLGFGFPL---VSFFHLCMHAYVKSLIFISSGIFIHGIGG--LQDYRKMMMGSISSKF 350
Cdd:PRK06473 291 AQKDMKKMVAYSSIGHMGYILLAAAAATPLsilAAVFQMISHGLISALLFLLVGVVYKKTGSrdVDVLRGLLNPERGLPI 370
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1182637058 351 SKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFlnSFGSLLVIVGSIFTVAYSFRLVSLIF 413
Cdd:PRK06473 371 TGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIF--PVQTLLCMIGTGLTAVYFLLLVNRVF 431
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
213-326 |
8.34e-09 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 58.12 E-value: 8.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 213 FHPWLPNAMEGPTPVSALLHSStMVVAGVYLLCRLLGFFNFTMMGIVMLVGA-LTMLYGSICALGQYDMKKIIAHSTTSQ 291
Cdd:PRK08601 223 FQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFAsISVLIGTGISLVQVDYKRQLVGSTMAQ 301
|
90 100 110
....*....|....*....|....*....|....*
gi 1182637058 292 LGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSG 326
Cdd:PRK08601 302 MGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSG 336
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-419 |
1.71e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 56.43 E-value: 1.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLgfFNFTMMGIVMLVGALTMLYGSICALGQYDM 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFL--DLYWLAYLLCVISVLSALVGSIGGLNQTQV 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 281 KKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMhayvkslIFISSGIFIHGIGGLQDYRKMMMGSISSKFSKLCMILCSL 360
Cdd:MTH00144 169 RALLAYSSISHTGWMLVAILHGSWLMWMYFLIY-------IVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLSIISLLL 241
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1182637058 361 SLGGFPFMSGFYSKDSILeNLYGPFLNSFGSLLVIVGSIFTVAYSFRLVSLIFLVNNNE 419
Cdd:MTH00144 242 SLGGLPPFLGFCSKLLVL-ISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKS 299
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
213-425 |
3.01e-08 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 56.21 E-value: 3.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 213 FHPWLPNAMEG-PTPVSALLhSSTMVVAGVYLLCRLL-GFFN---------FTMMGIvmlvgaLTMLYGSICALGQYDMK 281
Cdd:PRK02504 229 FHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRLLvTAFPsfdeqwkllFTALAI------LSMVLGNVVALAQTSMK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 282 KIIAHSTTSQLGLMVVTLGFGfplVSFFHLCMHAYVKSLIFISSGIF--------------IHGIGGLqdYRKmmmgsis 347
Cdd:PRK02504 302 RMLAYSSIGQAGFVMIGLVAG---TEAGYASMVFYLLAYLFMNLGAFacvilfslrtgtdqISDYAGL--YQK------- 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 348 SKFSKLCMILCSLSLGGFPFMSGFYSKDSIL-----ENLYGpflnsfgslLVIVGSIFTVA---YSFRLVSLIFLVNNNE 419
Cdd:PRK02504 370 DPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFwagwqAGLYL---------LVLVGLVTSVIsiyYYIRVIKMMVVKEPQE 440
|
....*.
gi 1182637058 420 GSFSVK 425
Cdd:PRK02504 441 MSDVVK 446
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-416 |
7.31e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 55.13 E-value: 7.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNAM-EGPTPVSALLhSSTMVVAGVYLLCRL--------LGFFNFTMMGIVMLVGALTMLYGS 271
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIvydvfkanFVFTTLPFNNVFMILAALAIVFGS 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 272 ICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFP---LVSFFHLCMHAYVKSLIFISSGIFIHGIGGLqDYRKMMMGSISS 348
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYyglAAAVAYIVNHSIVKSALFMVSGSISYHFGTT-KLEDCLNLWKSM 373
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1182637058 349 KFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPflNSFGSLLVI-VGSIFTVAYSFRLVSLIFLVN 416
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLlVGSGLSVIYVWKIVEALYFES 440
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
201-414 |
1.67e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 54.06 E-value: 1.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNAMEG-PTPVSALLHSSTMVvAGVYLLCRLL--GFFNFTMMGIVMLVG--ALTMLYGSICAL 275
Cdd:PRK05777 211 LVGLAFKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKI-AAFAVLLRLLvvAFGGLSEDWQQVLAIiaIASMLVGNLAAL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 276 GQYDMKKIIAHSTTSQLG--LMVVTLGFGFPLVS-FFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGSISSKFSK 352
Cdd:PRK05777 290 SQTNIKRLLAYSSIAHAGylLVGLAAGTAEGYSAvLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLA 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1182637058 353 LCMILCSLSLGGFPFMSGFYSKDSILENLygpfLNSFGSLLVIVGSIFTVA---YSFRLVSLIFL 414
Cdd:PRK05777 370 AVMTIFMLSLAGIPPTAGFWGKFYVFEAA----VEAGLWWLAVIGVLNSAIgafYYLRVIKLMYF 430
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
117-430 |
2.11e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 53.77 E-value: 2.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 117 SSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNIIGGYGNSQILNNFV 196
Cdd:MTH00226 149 SVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQT 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 197 FFFFLIG----MMAKSSLYFFHPWLPNA-MEGPTPVSALLhSSTMVVAGVYLLCRL------LGFFNFTMMGIVMlvGAL 265
Cdd:MTH00226 229 QKWIFLGiflaMAVKIPIFPFHIWLPKAhVEAPVAGSVLL-AGILLKLGGYGLVRLswpilpLGAQNLAPAVIAM--GIV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 266 TMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPL---VSFFHLCMHAYVKSLIFISSGIFI--HGIGGLQDYRK 340
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIgltGSIFIMLAHGIVSSLLFILVTILYdrHHTRLIKYYRG 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 341 MmmgSISSKFSKLCMILCSLSLGGFPFMSGFYSKD-SILENLYgpfLNSFGSLLVIVGSIFTVAYSFRLVSLI-FLVNNN 418
Cdd:MTH00226 386 L---SITMPIWGTIMIVTSLANVAVPPSGNFIGEYlSILSSFN---WNPIIGVFVCSGVILSAVYSFYFANRVtFGAPGN 459
|
330
....*....|..
gi 1182637058 419 EGSFSVKLNGQE 430
Cdd:MTH00226 460 LITFARDVNRRE 471
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
5-305 |
3.48e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 53.02 E-value: 3.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 5 IMIFVPMLLASFKMKKYLVNFKSMKINSLLFCIISIILVIHNhmgvtcLGGGWLNGNFLISWDFYSLVFLFIGFSVTWSI 84
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWS------SEVGWSFSNLYLSYDPLSSPLVILSCWLLPLM 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 85 LDFANWYMGAEVKN--KTFIMFLFMFLMFMFILTSSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIG 162
Cdd:MTH00206 76 FLASQNHMKNEPINrqRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 163 DFCFYIGIFLI--FMSGMNVNIIGGYGNSQILNNFVFFFFLIGMMAKSSLYFFHPWLPNA-MEGPTPVSALLHSSTMVVA 239
Cdd:MTH00206 156 SLPLLIALLFLqnSLGSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPVAGSMVLAGVLLKLG 235
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1182637058 240 --GVYLLCRLLGFFNFTMMGIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPL 305
Cdd:MTH00206 236 gyGMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPW 303
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
117-302 |
5.49e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 52.13 E-value: 5.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 117 SSINLVFLLIGWEGVGIMSFLLINWWfGRGEAGLSGLQAMIYNRIGDFCFYIGIflIFMSGMNVNIIGGYGNSQILNNFV 196
Cdd:PRK05846 129 AALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLGSLLMLVAI--IYLVVVYYNATGTFDIADLLNLPL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 197 FFFFLIGMMA--------KSSLYFFHPWLPNAM-EGPTPVSALLHSSTMVVAGVYLLCRLLGFF---NFTMMGIVMLVGA 264
Cdd:PRK05846 206 PPGVQYWLFLaffiafavKMPMFPLHTWLPDAHvQAPTAGSVLLAGILLKMGAYGLLRFSLPLFpdaSHEFAPIIITLGV 285
|
170 180 190
....*....|....*....|....*....|....*...
gi 1182637058 265 LTMLYGSICALGQYDMKKIIAHSTTSQLGlmVVTLGFG 302
Cdd:PRK05846 286 IAIIYGALVALAQTDIKKLIAYSSISHMG--FVTLGIF 321
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
169-461 |
1.12e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 50.74 E-value: 1.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 169 GIFLIFMSGMNVNIIGGYGNSQILNNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLL 248
Cdd:MTH00200 67 SALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLA 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 249 GFFNFTMMgivMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGfPLVSFFHLCMHayvksLIFISSGIF 328
Cdd:MTH00200 147 PALNSNIL---LLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLY-----VIITLTVFL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 329 IHGIGGLQDYRKMMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLnSFGSLLVIVGSIFTVAYSFRL 408
Cdd:MTH00200 218 LLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGL-FIYATILLLGSLLSLFFYLRL 296
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1182637058 409 VSLIFLVNNNEGSFSVKLNGQEQlnTTFFFMSRLFIWGMVGGFFTFWSLFFIF 461
Cdd:MTH00200 297 SYLTLLTLSPNQINMMSSWRTKS--NSNLLVGLLLLLSILGLPLTPQLLFLFF 347
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-379 |
3.74e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 49.58 E-value: 3.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNAM-EGPTPVSA----LLhssTMVvaGVYLLCRL--LGFFNFTMMGIVMLVGALTMLYGSIC 273
Cdd:PRK12665 216 LVAFGIKAAVFPLSFWLPDSYpTAPAPVTAvfagLL---TKV--GVYAIIRThtLLFPGGGLDTLLMVVALLTMVVGILG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 274 ALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPL---VSFFHLCMHAYVKSLIFISSGIfIHGIGGLQDYRKMmmGSISsKF 350
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVGL-IERQAGSSSLRRL--GGLA-KA 366
|
170 180 190
....*....|....*....|....*....|..
gi 1182637058 351 SKLCMILC---SLSLGGFPFMSGFYSKDSILE 379
Cdd:PRK12665 367 SPLLAVLFfvpALNLGGIPPFSGFIGKVALLE 398
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
201-448 |
1.84e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 46.97 E-value: 1.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCrllgfFNFTMMGIVMLVGALTMLYGSICALGQYDM 280
Cdd:MTH00197 86 ILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILA-----FNSSSFMGLLICSVLSSLIGGIGGMNQSNI 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 281 KKIIAHSTTSQLGLMVVTLGFGFPLVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMmgsissKFSKLCMILCSL 360
Cdd:MTH00197 161 RQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESM------SSNLVFLGLSFL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 361 SLGGFPFMSGFYSKDSILENLYGPfLNSFGSLLVIVGSIFTVAYSFRLVSLIFLVNNNEGSFSVKLNGQEQLN--TTFFF 438
Cdd:MTH00197 235 SLGGLPPLSGFFLKWLILTSLLSS-NISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLfiLLMMM 313
|
250
....*....|
gi 1182637058 439 MSRLFIWGMV 448
Cdd:MTH00197 314 LPLLMIFTMI 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
172-381 |
2.57e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 46.45 E-value: 2.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 172 LIFMSGMNVNIIGGYGNSQILNNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFF 251
Cdd:MTH00070 70 ILFSSTINAWFTGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 252 NFTMMgivMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFgFPLVSFFHLCMHayvkslIFISSGIFIhg 331
Cdd:MTH00070 150 NSNLL---IIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTF-SPHLTLLNLLIY------LIMTSSMFL-- 217
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1182637058 332 igglqdyrkMMMGSISSKFSKLC------------MILCSLSLGGFPFMSGFYSKDSILENL 381
Cdd:MTH00070 218 ---------MLMNLNSTNINKLSsswsknptltsmMMLTLLSLGGLPPTTGFIPKWLILQEL 270
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
257-374 |
4.18e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.18 E-value: 4.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 257 GIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPL---VSFFHLCMHAYVKSLIFISSGIfIHGIG 333
Cdd:PRK06277 267 GVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFHAINHVIYKSALFLGAGI-VSYRT 345
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1182637058 334 GLQDYRKmMMGSISSKFSKLCMILCS-LSLGGFPFMSGFYSK 374
Cdd:PRK06277 346 KTSNLRK-LGGLLPVMPVVAFMVLCAkLAISGVPPFNGFQSK 386
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
189-448 |
5.59e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 45.69 E-value: 5.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 189 SQILNNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTmmgIVMLVGALTML 268
Cdd:MTH00041 87 NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSN---ILILCGILSVL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 269 YGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGfPLVSFFHLCMHayvkslIFISSGIFIHGI-GGLQDYRKMMMGSIS 347
Cdd:MTH00041 164 VGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIY------IIINTSIFLIGNnFSLSTLSHLNKLSQL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 348 SKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLNSFGSLLvIVGSIFTVAYSFRLV---SLIFLVNNNEGSFSV 424
Cdd:MTH00041 237 NPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIIL-IIGSLLSLFFYLRISfntSLTLFPQHSISLFSW 315
|
250 260
....*....|....*....|....*
gi 1182637058 425 KLNGQEQLNTTFF-FMSRLFIWGMV 448
Cdd:MTH00041 316 RNSGNITVYGVILsILSSISILGLL 340
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
117-296 |
5.79e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 45.89 E-value: 5.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 117 SSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNIIGGYGNSQI--LNN 194
Cdd:MTH00014 108 SASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSiyLMN 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 195 FVFFFFLIGMMAKSSLYFFHPWLPNA-MEGPTPVSALLhSSTMVVAGVYLLCRLLGFFNFTMMGIVMLVGALTMLYG--- 270
Cdd:MTH00014 188 LWWLITILAFMVKMPLYTVHLWLPKAhVEAPVAGSMIL-AGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAvit 266
|
170 180
....*....|....*....|....*.
gi 1182637058 271 SICALGQYDMKKIIAHSTTSQLGLMV 296
Cdd:MTH00014 267 SLICIRQPDLKSLIAYSSVGHMGLMT 292
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
201-420 |
6.08e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 45.79 E-value: 6.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNAM-EGPTPVSallhsstMVVAGV------YLLCRllgfFNFTMMG--------IVMLVGAL 265
Cdd:PRK12561 192 LIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVllkmggYALIR----FNVQMLPdahvyfapALAILGVV 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 266 TMLYGSICALGQYDMKKIIAHSTTSQLGLmvVTLGFGfplvSFFHLCM---------HAYVKSLIFISSGIFIHGIGGLq 336
Cdd:PRK12561 261 NIIYGALNAFAQDNVKRRLAYSSVSHMGF--VLLGIA----AFTDLGIsgamlqmisHGLIAAALFFLTGVTYERTHTL- 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 337 dyrkMM--MGSISSKFSK-----LCMILCSLSLggfPFMSGFYSKDSIL-----ENLYGPFLNSFGSLLVIVGSIFTVAY 404
Cdd:PRK12561 334 ----SIpnMGGLAKVMPKtfalfTASSMASLAL---PGMSGFVSELTVFlgitsSDVYSSTFRTITILLAAVGLILTPIY 406
|
250
....*....|....*.
gi 1182637058 405 SFRLVSLIFLVNNNEG 420
Cdd:PRK12561 407 LLSMLRRVFYGPRSEL 422
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
186-422 |
2.26e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 43.61 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 186 YGNSQILNNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLcrlLGFFNFTMMGIVMLVGAL 265
Cdd:MTH00011 80 WSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSIL---FFFTSHNILPMMTSMAAM 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 266 TMLYGSICALGQYDMKKIIAHSTTSQLGLMVVTLgfgfplVSFFHLCMHAYVKSLIFISSGIFIHGIGGLQDYRKMMMGS 345
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMIS------VFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKIS 230
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1182637058 346 ISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLNSFgSLLVIVGSIFTVAYSFRLVSLIFLVNNNEGSF 422
Cdd:MTH00011 231 SMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILI-LLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSL 306
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
119-300 |
2.98e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 43.50 E-value: 2.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 119 INLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIF--MSGMNVNIIGGYGNSQILNNFV 196
Cdd:MTH00217 129 LDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYsyAGTTDYQALCCLKIEKELQYFI 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 197 FFFFLIGMMAKSSLYFFHPWLPNA-MEGPTPVSALLhsstmvvAGVYLLCRLLGFFNFT----------MMGIVMLVGAL 265
Cdd:MTH00217 209 FLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-------AGVLLKLGGYGFIRFSwpllpeaseyFSPLIQTLSLL 281
|
170 180 190
....*....|....*....|....*....|....*
gi 1182637058 266 TMLYGSICALGQYDMKKIIAHSTTSQLGLmvVTLG 300
Cdd:MTH00217 282 AIIYGSLTTCRQVDLKRIIAYSSVAHMGL--VTLG 314
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
118-412 |
6.20e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.47 E-value: 6.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 118 SINLVFLLIGWEGVGIMSFLLINWWFGRGEAglsglqAMIYNRIGDFCfyiGIFLIFMSGMNVNIIGGYGNSQILNNFVF 197
Cdd:PRK06459 91 SDNYLLFLAGWEIMTIPSYVAIALTKKNKRP------AFVFMAFGELS---TVLILAGFAWAFIISGTTNFSYLPSPVPL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 198 FFFLIGMMAKSSLYFFH--PWLPNAM-EGPTPVSALLhSSTMVVAGVYLLCRLLGFFNFTMMG----IVMLVGALTMLYG 270
Cdd:PRK06459 162 ILASFGFIIKMGMMPFLvsEWLPIAHgNAPSNFSAIL-SATMTLMGVYGILKMTILTQTIPIGyfglTILAIGAFSILFG 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 271 SICALGQYDMKKIIAHSTTSQLGLMVVTLGF------------GFPLVSFFHLCM-HAYVKSLIFISSGIFIHGIGGlqd 337
Cdd:PRK06459 241 ALYAYVSENVKGLLAFSTIENNGAILVALGLymvtkqlitsieHFSLITVILYSFaHSVAKTGLFLSSGLQEKQSIT--- 317
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1182637058 338 yrkmMMGSISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLNS---FGSLLVIVGSIFTVAYSFRLVSLI 412
Cdd:PRK06459 318 ----YSKKIRNRWIELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLhnvISILFIVTGAIIAMGEGLATALLI 391
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
117-418 |
6.43e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 42.32 E-value: 6.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 117 SSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSGMNVNI-------IGGYGNS 189
Cdd:MTH00196 11 SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinlvlNSGQSFS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 190 QILNNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCRLLGFFNFTMMGivmlvGALTMLY 269
Cdd:MTH00196 91 SVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIG-----GLFSLFV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 270 GSICALGQYDMKKIIAHSTTSQLGLMVVTLGFG-FPLVSFFHLCMHAYVKSLIFISSGIFIHGigglqDYRKMMMG---- 344
Cdd:MTH00196 166 GAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGsFESIQASLVYLFIYIIMSICVFSIILALN-----VYKNLIIEfsgl 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1182637058 345 SISSKFSKLCMILCSLSLGGFPFMSGFYSKDSILENL--YGPFLNSFgslLVIVGSIFTVAYSFRLVSLIFLVNNN 418
Cdd:MTH00196 241 SRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGvvYQYYLIFL---LAVFCSVIAGVYYVRIVKILFFQANS 313
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
188-440 |
1.07e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 41.35 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 188 NSQILNNFVFFFFLIGMMAKSSLYFFHPWLPNAMEGPTPVSALLHSSTMVVAGVYLLCrllgffNFTMMGIVMLVGALTM 267
Cdd:MTH00160 81 NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLS------YLINNNFIIIIIILSA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 268 LYGSICALGQYDMKKIIAHSTTSQLGLMVVTLGFGFPLVSFFhlcmhaYVKSLIFISSGIFIHGIGGLQDYRKMMMGSIS 347
Cdd:MTH00160 155 IIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIY------FLIYSIISLSIILLFNKFNIFFLNQLFNSNNK 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 348 SKFSKLCMILCSLSLGGFPFMSGFYSKDSILENLYGPFLNSFGSLLVIVgSIFTVAYSFRLVSLIFLVNNNEGSFSVKLN 427
Cdd:MTH00160 229 SKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMS-SLITLYFYLRISYSSLMLNYNKNKWNLKKK 307
|
250
....*....|...
gi 1182637058 428 GQEQLNTTFFFMS 440
Cdd:MTH00160 308 KNKFSLILNFLSF 320
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
117-454 |
1.74e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 41.20 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 117 SSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMsgmnvniIGGYGNSQILNNFV 196
Cdd:MTH00204 130 SVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYS-------ITGTTDYQILLNIK 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 197 FFFFL---------IGMMAKSSLYFFHPWLPNA-MEGPTPVSALLhsstmvvAGVYLLCRLLGFFNFT----------MM 256
Cdd:MTH00204 203 LPLSIqkwllvgffLSLAVKIPQIPFHIWLPQAhVEAPVAGSVIL-------AGILLKLGGYGFLRFSwplfpaaseyFA 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 257 GIVMLVGALTMLYGSICALGQYDMKKIIAHSTTSQLGLmvVTLGFGFPLV-----SFFHLCMHAYVKSLIFISSGI--FI 329
Cdd:MTH00204 276 PLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHGFVSSALFIAVTFlyER 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 330 HGIGGLQDYRKMmmgSISSKFSKLCMILCSLSLGGFP----FMSGFYSKDSILEnlygpfLNSFGSLLVIVGSIFTVAYS 405
Cdd:MTH00204 354 HHTRLIKYYRGL---TLTMPLFVIIMLVLSLANMGFPlscnFVGEFFSLLAAFE------YSLGLGVLVTSGMVWSAAYS 424
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1182637058 406 FRLVSLI-FLVNNNEGSFSVKLNGQEqlnttFFFMSRLFIWGMVGGFFTF 454
Cdd:MTH00204 425 LYLYNRIsFGGGSNYLLFSRDLNRRE-----LLAILPLIIAIFLLGIVPF 469
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
201-296 |
1.94e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 41.09 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 201 LIGMMAKSSLYFFHPWLPNA-MEGPTPVSallhsstMVVAGVyllcrLLGFFNFTMMGIVMLVGALTM------------ 267
Cdd:MTH00127 201 LLAFLVKMPLYGVHLWLPKAhVEAPIAGS-------MVLAAV-----LLKLGGYGMMRMMVMLDPLTKelsypfiilalw 268
|
90 100 110
....*....|....*....|....*....|..
gi 1182637058 268 ---LYGSICaLGQYDMKKIIAHSTTSQLGLMV 296
Cdd:MTH00127 269 giiMTGSIC-LRQTDLKSLIAYSSVSHMGLVA 299
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
117-297 |
2.28e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 40.59 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 117 SSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIFMSG--MNVNIIGGYGNSQILNN 194
Cdd:MTH00150 73 SVSSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYgsSFMLLISSLRKLLSSMG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 195 FVFFFFLIGMMAKSSLYFFHPWLPNA-MEGPTpvsallhSSTMVVAGVYL------LCRLLGFFNFTMMGIVMLVGALTM 267
Cdd:MTH00150 153 LWGLLVFLAFLVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSSSSFSIFLISLSL 225
|
170 180 190
....*....|....*....|....*....|...
gi 1182637058 268 ---LYGSICALGQYDMKKIIAHSTTSQLGLMVV 297
Cdd:MTH00150 226 wggVLTSLICLRQSDVKSLIAYSSVGHMSLVLA 258
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
404-576 |
2.39e-03 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 39.07 E-value: 2.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 404 YSFRLVSLIFLVNNNEGSFSvklNGQEQLNTTFFFMSRLFIWGMVGGFFTFWSLFFIFNEEYIGWGMKMIPLMIFGIGVI 483
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLS---PINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 484 IGSKIFLGVLMEFSPN---------SQLLFYNPVIHRLQLML-LFNGIKFMKFI-----EFWGMEMLWVNQLKKIPKFSA 548
Cdd:pfam06455 78 LGLELSNLSNKQLKKSlnfnlhsfsGSMWFFPNLSHRLIPKLsLKLGQKLAKQIdqgwsEKFGPQGIAKTLMTLSKIIQN 157
|
170 180
....*....|....*....|....*...
gi 1182637058 549 FGKNflSYKNYFIfgMFFMCIFFLFYFM 576
Cdd:pfam06455 158 SQKG--LIKIYLL--SFLLWLLLLLLLI 181
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
117-297 |
9.11e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 38.81 E-value: 9.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 117 SSINLVFLLIGWEGVGIMSFLLINWWFGRGEAGLSGLQAMIYNRIGDFCFYIGIFLIF--MSGMNVNIIGGYGNSQILNN 194
Cdd:MTH00205 106 SVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNslNFSLSMFFNFPLNFSDFYLF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1182637058 195 FVFFFFLIGMMAKSSLYFFHPWLPNA-MEGPTpvsallhSSTMVVAGV------YLLCRLLGFFNFTMMGIVMLVGALTM 267
Cdd:MTH00205 186 LYWIFLMLAFLVKLPMYFVHLWLPKAhVEAPV-------SGSMILAGVllklggYGLIRITSMLYKLNSNFSELFFSISL 258
|
170 180 190
....*....|....*....|....*....|...
gi 1182637058 268 LYG---SICALGQYDMKKIIAHSTTSQLGLMVV 297
Cdd:MTH00205 259 WGGvmtGMICLRQVDLKSLIAYSSVGHMGLMVV 291
|
|
| |
