|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 718.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 1 MRSPIRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLL 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 81 RALHANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 161 LVEWVWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1863132512 321 LNQILFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVIDPVVQVMWDNILDY 379
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILDY 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
23-365 |
4.94e-129 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 375.67 E-value: 4.94e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 23 PAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGASWFFICLYLHAGRG 102
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 103 MYYGSY-----INihtWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWGGFAVDNATLT 177
Cdd:COG1290 111 FFYGAYkkpreLN---WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLN 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 178 RFFALH-FLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEK----IPFHSYYTFKDLVGFLVVLFLLSMLALFSPQLlt 252
Cdd:COG1290 188 RFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFFFPIN-- 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 253 DPENFIPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSIAILFILPFTHLGKFRSMAFYPLNQILFWFYI 330
Cdd:COG1290 266 PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFI 345
|
330 340 350
....*....|....*....|....*....|....*
gi 1863132512 331 GMFFILTWIGACPVeaPYEQIGQIFTVLYFMYFVI 365
Cdd:COG1290 346 VFFIVLTILGANPP--IATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.12e-86 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 259.99 E-value: 2.12e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 10 PILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 90 WFFICLYLHAGRGMYYGSYINIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1863132512 168 GFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
8.91e-79 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 240.36 E-value: 8.91e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 19 LVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGASWFFICLYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 99 AGRGMYYG--SYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1863132512 177 TRFFALHFLLPFVIAALAVLHLLFLHETG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-341 |
1.07e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.73 E-value: 1.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFT-HLGKFRSMAFYPLNQILFWFyiGMFFILt 337
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFRRPVATTVFLF--GTVVAL- 141
|
....
gi 1863132512 338 WIGA 341
Cdd:TIGR01156 142 WLGI 145
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 718.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 1 MRSPIRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLL 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 81 RALHANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 161 LVEWVWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1863132512 321 LNQILFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVIDPVVQVMWDNILDY 379
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILDY 379
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 660.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 12 LKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGASWF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 92 FICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 172 DNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLLSMLALFSPQLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 252 TDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYPLNQILFWFYIG 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 1863132512 332 MFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVIDP 367
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 635.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 1 MRSPIRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLL 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 81 RALHANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 161 LVEWVWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1863132512 321 LNQILFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVIDPVVQVMWDNILD 378
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 631.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 1 MRSPIRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLL 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 81 RALHANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 161 LVEWVWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 321 LNQILFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFM-YFVIDPVVQVMWDNILDY 379
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTiLLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 619.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 5 IRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 85 ANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 165 VWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLLSMLA 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 245 LFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYPLNQI 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1863132512 325 LFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVI 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 609.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 5 IRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 85 ANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 165 VWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLLSMLA 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 245 LFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYPLNQI 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1863132512 325 LFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVI 365
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
3-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 604.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 3 SPIRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRA 82
Cdd:MTH00100 2 TNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 83 LHANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLV 162
Cdd:MTH00100 82 LHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 163 EWVWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLLSM 242
Cdd:MTH00100 162 EWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLML 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 243 LALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYPLN 322
Cdd:MTH00100 242 LVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLS 321
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1863132512 323 QILFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVI 365
Cdd:MTH00100 322 QCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILI 364
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 598.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 1 MRSPIRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLL 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 81 RALHANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 161 LVEWVWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1863132512 321 LNQILFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVIDPVVQVMWDNIL 377
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
3-365 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 595.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 3 SPIRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRA 82
Cdd:MTH00034 2 GPLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 83 LHANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLV 162
Cdd:MTH00034 82 IHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 163 EWVWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLLSM 242
Cdd:MTH00034 162 QWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 243 LALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYPLN 322
Cdd:MTH00034 242 LALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLS 321
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1863132512 323 QILFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVI 365
Cdd:MTH00034 322 QIAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 549.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 1 MRSPIRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLL 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 81 RALHANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 161 LVEWVWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1863132512 321 LNQILFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVIDPVVQVMWDNIL 377
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLL 377
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-365 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 516.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 4 PIRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRAL 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 84 HANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVE 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 164 WVWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLLSML 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 244 ALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYPLNQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1863132512 324 ILFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVI 365
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 507.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 1 MRSPIRKVHPILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLL 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 81 RALHANGASWFFICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 161 LVEWVWGGFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1863132512 321 LNQILFWFYIGMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVI 365
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLI 365
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
19-365 |
6.23e-138 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 398.16 E-value: 6.23e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 19 LVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGASWFFICLYLH 98
Cdd:MTH00033 15 IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 99 AGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWGGFAVDNATLTR 178
Cdd:MTH00033 95 IGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNR 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 179 FFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLLSMLALFS--PQLLTDPEN 256
Cdd:MTH00033 175 FFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDPEN 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 257 FIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYPLNQILFWFYIGMFFIL 336
Cdd:MTH00033 255 FIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIIL 334
|
330 340 350
....*....|....*....|....*....|
gi 1863132512 337 TWIGACPVEA-PYEQIGQIFTVLYFMYFVI 365
Cdd:MTH00033 335 TWIGSAPAGAdPYVLIGRIATIFYFGYFLV 364
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
23-365 |
4.94e-129 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 375.67 E-value: 4.94e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 23 PAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGASWFFICLYLHAGRG 102
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 103 MYYGSY-----INihtWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWGGFAVDNATLT 177
Cdd:COG1290 111 FFYGAYkkpreLN---WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLN 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 178 RFFALH-FLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEK----IPFHSYYTFKDLVGFLVVLFLLSMLALFSPQLlt 252
Cdd:COG1290 188 RFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFFFPIN-- 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 253 DPENFIPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSIAILFILPFTHLGKFRSMAFYPLNQILFWFYI 330
Cdd:COG1290 266 PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFI 345
|
330 340 350
....*....|....*....|....*....|....*
gi 1863132512 331 GMFFILTWIGACPVeaPYEQIGQIFTVLYFMYFVI 365
Cdd:COG1290 346 VFFIVLTILGANPP--IATLLGSINTVTYFAFFLI 378
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
15-365 |
9.59e-127 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 368.50 E-value: 9.59e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 15 MNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGASWFFIC 94
Cdd:MTH00086 3 VNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 95 LYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWGGFAVDNA 174
Cdd:MTH00086 83 LYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 175 TLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGfLVVLFLLSMLALFSPQLLTDP 254
Cdd:MTH00086 163 TLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYN-IIFWLVFIIFSLFYPFNLGDP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 255 ENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFThlgKFRSMAFYPLNQILFWFYIGMFF 334
Cdd:MTH00086 242 EMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFV---NNYTSCLNKLNKFLVFSFIVVNV 318
|
330 340 350
....*....|....*....|....*....|.
gi 1863132512 335 ILTWIGACPVEAPYEQIGQIFTVLYFMYFVI 365
Cdd:MTH00086 319 ILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
12-365 |
4.06e-100 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 300.75 E-value: 4.06e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 12 LKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGASWF 91
Cdd:MTH00046 2 ISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 92 FICLYLHAGRGMYYGSYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWGGFAV 171
Cdd:MTH00046 82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 172 DNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSNNPLGI-NSDGEKIPFHSYYTFKDLVGFLVVLFLLSMLALFSPQL 250
Cdd:MTH00046 162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 251 LTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGviaLVMSIAILFILPFTHLGKfrSMAFYPLNQILFWFYI 330
Cdd:MTH00046 242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG---LVLVLSFLFFLWVPTFNG--SSVYSVWRQVNFWLIV 316
|
330 340 350
....*....|....*....|....*....|....*
gi 1863132512 331 GMFFILTWIGACPVEAPYEQIGQIFTVLYFMYFVI 365
Cdd:MTH00046 317 SLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.12e-86 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 259.99 E-value: 2.12e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 10 PILKVMNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 90 WFFICLYLHAGRGMYYGSYINIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1863132512 168 GFAVDNATLTRFFALHFLLPFVIAALAVLHLLFLHETGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
8.91e-79 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 240.36 E-value: 8.91e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 19 LVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGASWFFICLYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 99 AGRGMYYG--SYINIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1863132512 177 TRFFALHFLLPFVIAALAVLHLLFLHETG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-355 |
6.13e-49 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 162.04 E-value: 6.13e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 208 NPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLLSMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1863132512 288 KLGGVIALVMSIAILFILPFTHLGKFRSMaFYPLNQILFWFYIGMFFILTWIGACPVEAPYEQIGQIF 355
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
2.75e-44 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 148.40 E-value: 2.75e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFTHLGKFRSMAFYPLNQILFWFYIGMFFILTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 1863132512 339 IGACPVEAPYEQIGQIFTVLY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
91-254 |
1.40e-43 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 148.93 E-value: 1.40e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 91 FFICLYLHAGRGMYYGSYINIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWGG 168
Cdd:pfam13631 3 FIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLFGG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 169 FAVDNATLTRFFALHF-LLPFVIAALAVLHLLFLHETGSNNPLGINSDGEKIPFHSYYTFKDLVGFLVVLFLLSMLALFS 247
Cdd:pfam13631 83 PFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQIN 162
|
....*..
gi 1863132512 248 PQLLTDP 254
Cdd:pfam13631 163 PIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
23-210 |
3.87e-38 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 136.38 E-value: 3.87e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 23 PAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGASWFFICLYLHAGRG 102
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 103 MYYGSYINIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWGGFAVDNATLTRFF 180
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|.
gi 1863132512 181 ALH-FLLPFVIAALAVLHLLFLHETGSNNPL 210
Cdd:PRK03735 193 AIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
1.11e-32 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 121.75 E-value: 1.11e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 25 PSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFSSVMHISRDVSYGWLLRALHANGASWFFICLYLHAGRGMY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 105 YGSYINIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVEWVWGGFAVDNATLTRFFAL 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 1863132512 183 H-FLLPFVIAALAVLHLLFLHETGSNNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
259-342 |
1.42e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 59.24 E-value: 1.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPF-THLGKFRSMAFYPLNQILFWFyigMFFILT 337
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFlENVNKFQNPFRRPVATTVFLI---GTAVAL 141
|
....*..
gi 1863132512 338 W--IGAC 342
Cdd:CHL00058 142 WlgIGAT 148
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
237-328 |
4.64e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 57.88 E-value: 4.64e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 237 LFLLSMLALFSPQLLTDPenfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFT-HLGKFRS 315
Cdd:COG5679 49 IALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIeNVNKFQN 123
|
90
....*....|...
gi 1863132512 316 MAFYPLNQILFWF 328
Cdd:COG5679 124 PFRRPVATAVFLF 136
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-341 |
1.07e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.73 E-value: 1.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863132512 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILFILPFT-HLGKFRSMAFYPLNQILFWFyiGMFFILt 337
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFRRPVATTVFLF--GTVVAL- 141
|
....
gi 1863132512 338 WIGA 341
Cdd:TIGR01156 142 WLGI 145
|
|
| |
