NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|83722605|ref|YP_443883|]
View 

large tegument protein [Papiine alphaherpesvirus 2]

Protein Classification

PHA03247 family protein( domain architecture ID 11476190)

PHA03247 family protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
1-3201 0e+00

large tegument protein UL36; Provisional


:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 4070.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605     1 MAPRGDRGIVVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGGGPPRMCSA 80
Cdd:PHA03247    1 MARRGDRGIVVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGSGPPRMCSI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605    81 VELPTFLEYPSGRGLRCVFSRVYGEVAFFGKPSPGLLETQCPAHDFFAGPWARRPLSYTLVTVGALGMGLYRDGDDAYLF 160
Cdd:PHA03247   81 VELPTFLEYPSGRGLRCVFSRVYGEVAFFGEPAPGLLETQCPAHDFFAGPWARRPLSYTLVTIGALGMGLYRDGDTAYLF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   161 DPHGLREGSPAFVAKVRAGEVYTYLTYYTQAHPEARWAGAMVFFVPSGPGPATPAALAAAVLQLYGASETYLQDEPFVER 240
Cdd:PHA03247  161 DPHGLREGSPAFVAKVRAGEVYTYLTYYTQDHPEARWAGAMVFFVPSGPGPAAPADLTAAALHLYGASETYLQDEPFVER 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   241 DVVASHPLRGD-DVPGATVLVGGGAVRPPGPARPATPKAPSPRPAPPAAPPAAAAeptapgaaapspGVWGAALA-GAPL 318
Cdd:PHA03247  241 RVVISHPLRGDiAAPAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPD------------GVWGAALAgAPLA 308
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   319 ALPAPPRPDPAPADDPEDADGEDGAMEVVSPLPHPNQHYPLGFSKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRARRAA 398
Cdd:PHA03247  309 LPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPLPRPRQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSA 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   399 RHAASPFARGTGGDDQTRpaapapastpaptpapgstPAPPsTPASAPASTAPsgpatpaptsapapspptlapGGPAAQ 478
Cdd:PHA03247  389 RHAATPFARGPGGDDQTR-------------------PAAP-VPASVPTPAPT---------------------PVPASA 427
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   479 PRPPETPLPTPTPDSGESPAPPPEPQPPRPAADAAEPAPDDATRKALDALRERRPPEPPTGGLAELLGRHPDTGGAVARL 558
Cdd:PHA03247  428 PPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGADLAELLGRHPDTAGTVVRL 507
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   559 AEREATIGREVAECSRLTVNALRSPFPDAPGLLQHCVVLLFERVLAFLIENGARTHAGAGAEGPAAALLDLTLSLLPSRT 638
Cdd:PHA03247  508 AAREAAIAREVAECSRLTINALRSPFPASPGLLQHCVIFLFERVLAFLIENGARTHAGAGAEGPAAALLDLTLSLLPRRT 587
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   639 AVGDFLASTRMTLADVAAHVPLIQPVLEEGSGVGRLALAKLVLVARDVIRTTDEFHGELAELERRLRETPPPEVYARLSE 718
Cdd:PHA03247  588 AVGDFLASTRMTLADVAAHLPLIQPVLDEGSGVGRLALAKLVLVARDVIRETDAFHGELAELERQLRATPPAEVYARLSE 667
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   719 WLLERSRAGPDTLFAPATPTHPEPLLQRVQALAGFARAEETRAAAEDREVRGALDALARGVGAVARRSGPLTVAPAPPAA 798
Cdd:PHA03247  668 WLLERSRAGPDTLFAPATPTHPEPLLQRVQALAGFARGEEIRAAAEDREVRGALDALARGVDAVARRAGPLTVAPAPAAP 747
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   799 PLEPPGGSGGprpqpLSPEAIRVRLEQVRAEGQAAIEGATREYFQRGAAYSAKALLAGDARDRRFHVASAPVVPVGQLLE 878
Cdd:PHA03247  748 GGQGAPRPPP-----LSPEAIRVRLEQVRAQGQRAIEGAVKEYFHRGAVYSAKALLAGDARDRRFHVASAPVVPVVQLLE 822
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   879 SLPAFDARVREVAGRARVPAPPALATSPQAELLRELVQRGRDLEAPADLAAWLASLGDAAGQGLVARKELDELTKAVHQI 958
Cdd:PHA03247  823 SLPAFDAHVREVAQRARVPAPPPLATSPQAILLRELLQRGQDLEAPADLAAWLASLGDAAGQGLVERKELDELARAIHKI 902
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   959 NERAVRRSSGLAELERFEALDAALRRELESEAA-FGPAGAAGDGDAGGPPPETRRLAEDALRQAKAMAAAKLTDELSPEA 1037
Cdd:PHA03247  903 NERQVRRSSGLAELERFEALDAALRQELESEAAfVPAPGAAPYADAGGLSPETRRLAEDALRQAKAMAAAKLTDELSPEA 982
                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1038 RERLAARVRAIEAMLEEARERAEAARAARARFFQKLQGVLRPLPDFGGLRVAPAVLATLRADLPGGWTGLPEAAQAAPPE 1117
Cdd:PHA03247  983 RERLRARARAIEAMLEEARERAEAARAARERFFQKLQGVLRPLPDFGGLRAAPAVLATLRADLPGGWTDLPDAAQAAPPE 1062
                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1118 ARAALRADLWGLLGQYREALEHPTPDTATALSGLHPNFAEVLRELFPAAPETPLLVRFFSDHAPRLTRAVSEAIAAGSAA 1197
Cdd:PHA03247 1063 VRAALRADLWGLLGQYREALEHPTPDTATALSGLHPNFVEVLRDLFPAAPETPLLVQFFSDHAPRIARAVSEAINAGSAA 1142
                        1210      1220      1230      1240      1250      1260      1270      1280
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1198 VATASPESTAGAAATARAVLAETVAALSPAVLDPACPLAFLVALADSAAGYEKAARLALDARRAIARLGALGAAAADLAV 1277
Cdd:PHA03247 1143 VATASPESTVDAAVRAHGVLADAVAALSPAVRDPACPLAFLVALADSAAGYVKATRLALDARRAIARLGALGAAAADLAV 1222
                        1290      1300      1310      1320      1330      1340      1350      1360
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1278 AVRRENPQAEGDRAELLEAAARAVAAAREGLVACEGEFGGLLHAEGSAGDPSPSGRALQELGKVVGATRRRADELEAAAA 1357
Cdd:PHA03247 1223 AVRRENPQAEGDRAALLEAAARAVTAAREGLAACEGEFGGLLHAEGSAGDPSPSGRALQELGKVVGATRRRADELEAAAA 1302
                        1370      1380      1390      1400      1410      1420      1430      1440
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1358 DLAEKIAARDARAGRERWAADVEAALDRVETRAEFDAVELRRLQALAARNGYSPRDFRKRAEQALAANAATATLALEAAF 1437
Cdd:PHA03247 1303 DLAEKMAARRARASRERWAADVEAALDRVENRAEFDAVELRRLQALAATHGYNPRDFRKRAEQALAANAKTATLALEAAF 1382
                        1450      1460      1470      1480      1490      1500      1510      1520
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1438 AFNPYTPENQHHPTLPPLAALHRVDWGPAFGAAAETYAEMFRVDTEPLARLLRLAGGLLDLAQAGGGFIDYHEAVSRLAE 1517
Cdd:PHA03247 1383 AFNPYTPENQRHPMLPPLAAIHRIDWGPAFGAAAETYAEMFRVDTEPLARLLRLAGGLLELAQAGGGFIDYHEAVSRLAE 1462
                        1530      1540      1550      1560      1570      1580      1590      1600
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1518 DLNGVPSLRRYVPFFRRGHAEYLELCARLDALRAGVHRALGGVPLDLAAAAEQTVRLRGDPAAAAELVRTGVALACPSED 1597
Cdd:PHA03247 1463 DLNGVPSLRRYVPFFRRGHAEYLELCDRLDALRADVHRALGGVPLDLAAAAEQTSRLRNDPAAAAELVRTGVTLACPSED 1542
                        1610      1620      1630      1640      1650      1660      1670      1680
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1598 ALAACVGALERVDQTPVKDSAYAEYVAFVARRDLAEAKDALVRAKQQRAEATDRVTAALREALAAHERQARSEAESLANL 1677
Cdd:PHA03247 1543 ALAACVGALERVDQSPVKDTAYAEYVAFVARRDLAEAKDALVRAKQQRAEATDRVTAALREALAAHERRAQSEAESLANL 1622
                        1690      1700      1710      1720      1730      1740      1750      1760
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1678 KTLLRVAAIPAAAAKTLDQARSVPEIVDQIELLLEQTEKAAELDSAAVDWLEHARRVFEAHPLTAAREGAPDPLARLHER 1757
Cdd:PHA03247 1623 KTLLRVAAIPATAAKTLDQARSVAEIVDQIELLLEQTEKAAELDVAAVDWLEHARRVFEAHPLTAARGGGPDPLARLHAR 1702
                        1770      1780      1790      1800      1810      1820      1830      1840
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1758 LDALGETRRRTSALRRSLEAAEGEWDEVWARFGRARGGAWKSPEALAAAREQLLALQTATNTVLGLVADAHYGRLPARYR 1837
Cdd:PHA03247 1703 LDALGETRRRTEALRRSLEAAEAEWDEVWGRFGRVRGGAWKSPEALRAAREQLRALQTATNTVLGLRADAHYERLPAKYQ 1782
                        1850      1860      1870      1880      1890      1900      1910      1920
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1838 GAVGAKTAERAGAVEELGAAVARHDGLLARLREEVVGRVPWEMNADALGRLLAEFDALAKDLTPWAVDEFRGARALVQHR 1917
Cdd:PHA03247 1783 GALGAKSAERAGAVEELGAAVARHDGLLARLREEVVARVPWEMNADALGRLLAEFDALAGDLAPWAVDEFRGARALVQHR 1862
                        1930      1940      1950      1960      1970      1980      1990      2000
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1918 LGLYSAYAKARAHTGAGGGAPPAPLLVDVRALEARARRPGERHEPDPRAVRSRGEAYLRASGDPGPLELREATSELDLPF 1997
Cdd:PHA03247 1863 LGLYSAYAKARAQTGAGGAAPPAPLLVDLRALEARARSPPERHEPDPRMVRRRGEAYLRASGDPGPLELREATSELDLPF 1942
                        2010      2020      2030      2040      2050      2060      2070      2080
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1998 ATSYLTPDGTPLQYALCFPAVTDKLGALLMRPEAARARPPLPPEGLESTQTLAAMCTVPLITHLQLALSDAQGEGFRLFG 2077
Cdd:PHA03247 1943 ATSYLAPDGTPLQYALCFPAVTDKLGALLMRPEAARARPPLPTEGLESTQTLAAMCTVPLITRLQLALSDAQGAGFRLFG 2022
                        2090      2100      2110      2120      2130      2140      2150      2160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2078 RFVRHRQPAWRDSVAAAAELYAALAATTLTREFGCRWDELGWARGEGALAPLAEPAGARRPRVTFSINDLMVALVAGTPE 2157
Cdd:PHA03247 2023 RFVRHRQPAWRDSMAAAAELYAALVATTLTREFGCRWDELGWARGAAAPAPLAEPAGSRRPRVTFNENDVMVALVAGTPE 2102
                        2170      2180      2190      2200      2210      2220      2230      2240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2158 HIYNFWRLDLVLQHEYMHLTLPAAWETGAGTILFVQRLTPHARPEVRVLPAVPAGPPPATGLLFGTRLADWRHGKLSPSD 2237
Cdd:PHA03247 2103 HIYNFWRLDLVLQHEYMHLTLPAAWETGAGSILFVQRLTPHPDPEVRVLPAVPAGPPPATGLLFGTRLADWRHGKLSESD 2182
                        2250      2260      2270      2280      2290      2300      2310      2320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2238 PLAPWRAAPELAAGGAAAALGGLDGPRALVAVSVLGRMCLPSAALAALWSCMFPDGYSEYDSLDALLEARLGSGRAPDPQ 2317
Cdd:PHA03247 2183 PLAPWRAAPELAAGGAAAALGGLSGPRALVAVSVLGRMCLPSAALAALWSCMFPDGYSEYDSLDALLAARLGSGRTPDPQ 2262
                        2330      2340      2350      2360      2370      2380      2390      2400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2318 GGREDAPAPPAHALYRPSGQRVLVRGGPPDPAARVTVMDLVLAATLLGAPVVVALRSDPAFSEGSELELCVTLFDSRARA 2397
Cdd:PHA03247 2263 GGREDSPAPPAHALYRPSGQRVLVRGGAPDPAARVTVMDLVLAATLLGAPVVVALRSDPAFSRGSELELCVTLFDSRARG 2342
                        2410      2420      2430      2440      2450      2460      2470      2480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2398 ADAALREVVSADVETWATDLLHADLNAIENACLAAQLPALSALVAARPLARSPPCLVIVDISMAPLFVLWEQPDPPGPPD 2477
Cdd:PHA03247 2343 ADAALREVVSSDVETWAVDLLHADLNPIENACLAAQLPALSALIAARPLARSPPCLVLVDISMAPLFVLWEQPDPPGPPD 2422
                        2490      2500      2510      2520      2530      2540      2550      2560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2478 VRFVGSDEIEELPFVSPGGDVLAGLAAEGDPFFAQTILGAPFSLSRLLREAFPGAPAYRRPAEARFPFAAGGA----PDP 2553
Cdd:PHA03247 2423 VRFVGSEEIEELPFVSPGGDVLAGLAADGDPFFARTILGAPFSLSLLLGELFPGAPVYRRPAEARFPFAAGAApdpgGGG 2502
                        2570      2580      2590      2600      2610      2620      2630      2640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2554 DPDPDAPPAPSRPTPAILPDEPVGEAVHPRMLTWIRGLEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAV 2633
Cdd:PHA03247 2503 PPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTWIRGLEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAV 2582
                        2650      2660      2670      2680      2690      2700      2710      2720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2634 GSRAHRPDAPPQPARPRAPGDDSGSSPGQAAPASLPPDTPRPDPPPPGPRPRATEpggggaaaapdPDPRPPTTVPPPER 2713
Cdd:PHA03247 2583 TSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANE-----------PDPHPPPTVPPPER 2651
                        2730      2740      2750      2760      2770      2780      2790      2800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2714 PRNAPAPGRVSLPRRATRPGRPAGASSPPRRPTRRAARPAVGSLTSLAD--PPPPEPEPRPATPATPATPATPATPATPA 2791
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADppPPPPTPEPAPHALVSATPLPPGPAAARQA 2731
                        2810      2820      2830      2840      2850      2860      2870      2880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2792 TPATPATPATPATPATPATPATPATPATPATPATPPSAAAAADRASAPPATTTPPAGSSAAVATAAAPLPSDASPAPAAA 2871
Cdd:PHA03247 2732 SPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAV 2811
                        2890      2900      2910      2920      2930      2940      2950      2960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2872 TPPASALNPAARPATLEpptttaapaASAASAASAAHATPSEPSPEPTPPGGSVAPGGDLRRRGPAGSAPPKVAAPPHPP 2951
Cdd:PHA03247 2812 LAPAAALPPAASPAGPL---------PPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPP 2882
                        2970      2980      2990      3000      3010      3020      3030      3040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2952 VRRMARPAVSRSTESFALPPDGPERPRTPAAATEAAPETPA--------------RPDAPLAPTTDTAGVGEASGVVPDP 3017
Cdd:PHA03247 2883 VRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPppppqpqpppppppRPQPPLAPTTDPAGAGEPSGAVPQP 2962
                        3050      3060      3070      3080      3090      3100      3110      3120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  3018 WLGALVPGRVAVPR-RVSSPAPSRETPASSTPSLRRHATSRVSSWASSLALHEETDHGPVSLKQTLWSPDDTEESDDSSV 3096
Cdd:PHA03247 2963 WLGALVPGRVAVPRfRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALHEETDPPPVSLKQTLWPPDDTEDSDADSL 3042
                        3130      3140      3150      3160      3170      3180      3190      3200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  3097 DSD-PGRFDLEA---PDPDDPDPFAHPPDPNTPEAGARASPSSHFGPPPLSANAALSRRYVRSTGRSALAVLIEACRRIR 3172
Cdd:PHA03247 3043 FDSdSERSDLEAldpLPPEPHDPFAHEPDPATPEAGARESPSSQFGPPPLSANAALSRRYVRSTGRSALAVLIEACRRIR 3122
                        3210      3220
                  ....*....|....*....|....*....
gi 83722605  3173 RQLRRTRHALLDRSGAVLTGLYHVRMLLG 3201
Cdd:PHA03247 3123 RQLRRTRHALLDRSGAVLTGLYHVRMLLG 3151
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
1-3201 0e+00

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 4070.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605     1 MAPRGDRGIVVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGGGPPRMCSA 80
Cdd:PHA03247    1 MARRGDRGIVVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGSGPPRMCSI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605    81 VELPTFLEYPSGRGLRCVFSRVYGEVAFFGKPSPGLLETQCPAHDFFAGPWARRPLSYTLVTVGALGMGLYRDGDDAYLF 160
Cdd:PHA03247   81 VELPTFLEYPSGRGLRCVFSRVYGEVAFFGEPAPGLLETQCPAHDFFAGPWARRPLSYTLVTIGALGMGLYRDGDTAYLF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   161 DPHGLREGSPAFVAKVRAGEVYTYLTYYTQAHPEARWAGAMVFFVPSGPGPATPAALAAAVLQLYGASETYLQDEPFVER 240
Cdd:PHA03247  161 DPHGLREGSPAFVAKVRAGEVYTYLTYYTQDHPEARWAGAMVFFVPSGPGPAAPADLTAAALHLYGASETYLQDEPFVER 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   241 DVVASHPLRGD-DVPGATVLVGGGAVRPPGPARPATPKAPSPRPAPPAAPPAAAAeptapgaaapspGVWGAALA-GAPL 318
Cdd:PHA03247  241 RVVISHPLRGDiAAPAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPD------------GVWGAALAgAPLA 308
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   319 ALPAPPRPDPAPADDPEDADGEDGAMEVVSPLPHPNQHYPLGFSKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRARRAA 398
Cdd:PHA03247  309 LPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPLPRPRQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSA 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   399 RHAASPFARGTGGDDQTRpaapapastpaptpapgstPAPPsTPASAPASTAPsgpatpaptsapapspptlapGGPAAQ 478
Cdd:PHA03247  389 RHAATPFARGPGGDDQTR-------------------PAAP-VPASVPTPAPT---------------------PVPASA 427
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   479 PRPPETPLPTPTPDSGESPAPPPEPQPPRPAADAAEPAPDDATRKALDALRERRPPEPPTGGLAELLGRHPDTGGAVARL 558
Cdd:PHA03247  428 PPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGADLAELLGRHPDTAGTVVRL 507
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   559 AEREATIGREVAECSRLTVNALRSPFPDAPGLLQHCVVLLFERVLAFLIENGARTHAGAGAEGPAAALLDLTLSLLPSRT 638
Cdd:PHA03247  508 AAREAAIAREVAECSRLTINALRSPFPASPGLLQHCVIFLFERVLAFLIENGARTHAGAGAEGPAAALLDLTLSLLPRRT 587
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   639 AVGDFLASTRMTLADVAAHVPLIQPVLEEGSGVGRLALAKLVLVARDVIRTTDEFHGELAELERRLRETPPPEVYARLSE 718
Cdd:PHA03247  588 AVGDFLASTRMTLADVAAHLPLIQPVLDEGSGVGRLALAKLVLVARDVIRETDAFHGELAELERQLRATPPAEVYARLSE 667
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   719 WLLERSRAGPDTLFAPATPTHPEPLLQRVQALAGFARAEETRAAAEDREVRGALDALARGVGAVARRSGPLTVAPAPPAA 798
Cdd:PHA03247  668 WLLERSRAGPDTLFAPATPTHPEPLLQRVQALAGFARGEEIRAAAEDREVRGALDALARGVDAVARRAGPLTVAPAPAAP 747
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   799 PLEPPGGSGGprpqpLSPEAIRVRLEQVRAEGQAAIEGATREYFQRGAAYSAKALLAGDARDRRFHVASAPVVPVGQLLE 878
Cdd:PHA03247  748 GGQGAPRPPP-----LSPEAIRVRLEQVRAQGQRAIEGAVKEYFHRGAVYSAKALLAGDARDRRFHVASAPVVPVVQLLE 822
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   879 SLPAFDARVREVAGRARVPAPPALATSPQAELLRELVQRGRDLEAPADLAAWLASLGDAAGQGLVARKELDELTKAVHQI 958
Cdd:PHA03247  823 SLPAFDAHVREVAQRARVPAPPPLATSPQAILLRELLQRGQDLEAPADLAAWLASLGDAAGQGLVERKELDELARAIHKI 902
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   959 NERAVRRSSGLAELERFEALDAALRRELESEAA-FGPAGAAGDGDAGGPPPETRRLAEDALRQAKAMAAAKLTDELSPEA 1037
Cdd:PHA03247  903 NERQVRRSSGLAELERFEALDAALRQELESEAAfVPAPGAAPYADAGGLSPETRRLAEDALRQAKAMAAAKLTDELSPEA 982
                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1038 RERLAARVRAIEAMLEEARERAEAARAARARFFQKLQGVLRPLPDFGGLRVAPAVLATLRADLPGGWTGLPEAAQAAPPE 1117
Cdd:PHA03247  983 RERLRARARAIEAMLEEARERAEAARAARERFFQKLQGVLRPLPDFGGLRAAPAVLATLRADLPGGWTDLPDAAQAAPPE 1062
                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1118 ARAALRADLWGLLGQYREALEHPTPDTATALSGLHPNFAEVLRELFPAAPETPLLVRFFSDHAPRLTRAVSEAIAAGSAA 1197
Cdd:PHA03247 1063 VRAALRADLWGLLGQYREALEHPTPDTATALSGLHPNFVEVLRDLFPAAPETPLLVQFFSDHAPRIARAVSEAINAGSAA 1142
                        1210      1220      1230      1240      1250      1260      1270      1280
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1198 VATASPESTAGAAATARAVLAETVAALSPAVLDPACPLAFLVALADSAAGYEKAARLALDARRAIARLGALGAAAADLAV 1277
Cdd:PHA03247 1143 VATASPESTVDAAVRAHGVLADAVAALSPAVRDPACPLAFLVALADSAAGYVKATRLALDARRAIARLGALGAAAADLAV 1222
                        1290      1300      1310      1320      1330      1340      1350      1360
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1278 AVRRENPQAEGDRAELLEAAARAVAAAREGLVACEGEFGGLLHAEGSAGDPSPSGRALQELGKVVGATRRRADELEAAAA 1357
Cdd:PHA03247 1223 AVRRENPQAEGDRAALLEAAARAVTAAREGLAACEGEFGGLLHAEGSAGDPSPSGRALQELGKVVGATRRRADELEAAAA 1302
                        1370      1380      1390      1400      1410      1420      1430      1440
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1358 DLAEKIAARDARAGRERWAADVEAALDRVETRAEFDAVELRRLQALAARNGYSPRDFRKRAEQALAANAATATLALEAAF 1437
Cdd:PHA03247 1303 DLAEKMAARRARASRERWAADVEAALDRVENRAEFDAVELRRLQALAATHGYNPRDFRKRAEQALAANAKTATLALEAAF 1382
                        1450      1460      1470      1480      1490      1500      1510      1520
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1438 AFNPYTPENQHHPTLPPLAALHRVDWGPAFGAAAETYAEMFRVDTEPLARLLRLAGGLLDLAQAGGGFIDYHEAVSRLAE 1517
Cdd:PHA03247 1383 AFNPYTPENQRHPMLPPLAAIHRIDWGPAFGAAAETYAEMFRVDTEPLARLLRLAGGLLELAQAGGGFIDYHEAVSRLAE 1462
                        1530      1540      1550      1560      1570      1580      1590      1600
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1518 DLNGVPSLRRYVPFFRRGHAEYLELCARLDALRAGVHRALGGVPLDLAAAAEQTVRLRGDPAAAAELVRTGVALACPSED 1597
Cdd:PHA03247 1463 DLNGVPSLRRYVPFFRRGHAEYLELCDRLDALRADVHRALGGVPLDLAAAAEQTSRLRNDPAAAAELVRTGVTLACPSED 1542
                        1610      1620      1630      1640      1650      1660      1670      1680
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1598 ALAACVGALERVDQTPVKDSAYAEYVAFVARRDLAEAKDALVRAKQQRAEATDRVTAALREALAAHERQARSEAESLANL 1677
Cdd:PHA03247 1543 ALAACVGALERVDQSPVKDTAYAEYVAFVARRDLAEAKDALVRAKQQRAEATDRVTAALREALAAHERRAQSEAESLANL 1622
                        1690      1700      1710      1720      1730      1740      1750      1760
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1678 KTLLRVAAIPAAAAKTLDQARSVPEIVDQIELLLEQTEKAAELDSAAVDWLEHARRVFEAHPLTAAREGAPDPLARLHER 1757
Cdd:PHA03247 1623 KTLLRVAAIPATAAKTLDQARSVAEIVDQIELLLEQTEKAAELDVAAVDWLEHARRVFEAHPLTAARGGGPDPLARLHAR 1702
                        1770      1780      1790      1800      1810      1820      1830      1840
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1758 LDALGETRRRTSALRRSLEAAEGEWDEVWARFGRARGGAWKSPEALAAAREQLLALQTATNTVLGLVADAHYGRLPARYR 1837
Cdd:PHA03247 1703 LDALGETRRRTEALRRSLEAAEAEWDEVWGRFGRVRGGAWKSPEALRAAREQLRALQTATNTVLGLRADAHYERLPAKYQ 1782
                        1850      1860      1870      1880      1890      1900      1910      1920
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1838 GAVGAKTAERAGAVEELGAAVARHDGLLARLREEVVGRVPWEMNADALGRLLAEFDALAKDLTPWAVDEFRGARALVQHR 1917
Cdd:PHA03247 1783 GALGAKSAERAGAVEELGAAVARHDGLLARLREEVVARVPWEMNADALGRLLAEFDALAGDLAPWAVDEFRGARALVQHR 1862
                        1930      1940      1950      1960      1970      1980      1990      2000
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1918 LGLYSAYAKARAHTGAGGGAPPAPLLVDVRALEARARRPGERHEPDPRAVRSRGEAYLRASGDPGPLELREATSELDLPF 1997
Cdd:PHA03247 1863 LGLYSAYAKARAQTGAGGAAPPAPLLVDLRALEARARSPPERHEPDPRMVRRRGEAYLRASGDPGPLELREATSELDLPF 1942
                        2010      2020      2030      2040      2050      2060      2070      2080
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1998 ATSYLTPDGTPLQYALCFPAVTDKLGALLMRPEAARARPPLPPEGLESTQTLAAMCTVPLITHLQLALSDAQGEGFRLFG 2077
Cdd:PHA03247 1943 ATSYLAPDGTPLQYALCFPAVTDKLGALLMRPEAARARPPLPTEGLESTQTLAAMCTVPLITRLQLALSDAQGAGFRLFG 2022
                        2090      2100      2110      2120      2130      2140      2150      2160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2078 RFVRHRQPAWRDSVAAAAELYAALAATTLTREFGCRWDELGWARGEGALAPLAEPAGARRPRVTFSINDLMVALVAGTPE 2157
Cdd:PHA03247 2023 RFVRHRQPAWRDSMAAAAELYAALVATTLTREFGCRWDELGWARGAAAPAPLAEPAGSRRPRVTFNENDVMVALVAGTPE 2102
                        2170      2180      2190      2200      2210      2220      2230      2240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2158 HIYNFWRLDLVLQHEYMHLTLPAAWETGAGTILFVQRLTPHARPEVRVLPAVPAGPPPATGLLFGTRLADWRHGKLSPSD 2237
Cdd:PHA03247 2103 HIYNFWRLDLVLQHEYMHLTLPAAWETGAGSILFVQRLTPHPDPEVRVLPAVPAGPPPATGLLFGTRLADWRHGKLSESD 2182
                        2250      2260      2270      2280      2290      2300      2310      2320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2238 PLAPWRAAPELAAGGAAAALGGLDGPRALVAVSVLGRMCLPSAALAALWSCMFPDGYSEYDSLDALLEARLGSGRAPDPQ 2317
Cdd:PHA03247 2183 PLAPWRAAPELAAGGAAAALGGLSGPRALVAVSVLGRMCLPSAALAALWSCMFPDGYSEYDSLDALLAARLGSGRTPDPQ 2262
                        2330      2340      2350      2360      2370      2380      2390      2400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2318 GGREDAPAPPAHALYRPSGQRVLVRGGPPDPAARVTVMDLVLAATLLGAPVVVALRSDPAFSEGSELELCVTLFDSRARA 2397
Cdd:PHA03247 2263 GGREDSPAPPAHALYRPSGQRVLVRGGAPDPAARVTVMDLVLAATLLGAPVVVALRSDPAFSRGSELELCVTLFDSRARG 2342
                        2410      2420      2430      2440      2450      2460      2470      2480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2398 ADAALREVVSADVETWATDLLHADLNAIENACLAAQLPALSALVAARPLARSPPCLVIVDISMAPLFVLWEQPDPPGPPD 2477
Cdd:PHA03247 2343 ADAALREVVSSDVETWAVDLLHADLNPIENACLAAQLPALSALIAARPLARSPPCLVLVDISMAPLFVLWEQPDPPGPPD 2422
                        2490      2500      2510      2520      2530      2540      2550      2560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2478 VRFVGSDEIEELPFVSPGGDVLAGLAAEGDPFFAQTILGAPFSLSRLLREAFPGAPAYRRPAEARFPFAAGGA----PDP 2553
Cdd:PHA03247 2423 VRFVGSEEIEELPFVSPGGDVLAGLAADGDPFFARTILGAPFSLSLLLGELFPGAPVYRRPAEARFPFAAGAApdpgGGG 2502
                        2570      2580      2590      2600      2610      2620      2630      2640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2554 DPDPDAPPAPSRPTPAILPDEPVGEAVHPRMLTWIRGLEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAV 2633
Cdd:PHA03247 2503 PPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTWIRGLEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAV 2582
                        2650      2660      2670      2680      2690      2700      2710      2720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2634 GSRAHRPDAPPQPARPRAPGDDSGSSPGQAAPASLPPDTPRPDPPPPGPRPRATEpggggaaaapdPDPRPPTTVPPPER 2713
Cdd:PHA03247 2583 TSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANE-----------PDPHPPPTVPPPER 2651
                        2730      2740      2750      2760      2770      2780      2790      2800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2714 PRNAPAPGRVSLPRRATRPGRPAGASSPPRRPTRRAARPAVGSLTSLAD--PPPPEPEPRPATPATPATPATPATPATPA 2791
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADppPPPPTPEPAPHALVSATPLPPGPAAARQA 2731
                        2810      2820      2830      2840      2850      2860      2870      2880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2792 TPATPATPATPATPATPATPATPATPATPATPATPPSAAAAADRASAPPATTTPPAGSSAAVATAAAPLPSDASPAPAAA 2871
Cdd:PHA03247 2732 SPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAV 2811
                        2890      2900      2910      2920      2930      2940      2950      2960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2872 TPPASALNPAARPATLEpptttaapaASAASAASAAHATPSEPSPEPTPPGGSVAPGGDLRRRGPAGSAPPKVAAPPHPP 2951
Cdd:PHA03247 2812 LAPAAALPPAASPAGPL---------PPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPP 2882
                        2970      2980      2990      3000      3010      3020      3030      3040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2952 VRRMARPAVSRSTESFALPPDGPERPRTPAAATEAAPETPA--------------RPDAPLAPTTDTAGVGEASGVVPDP 3017
Cdd:PHA03247 2883 VRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPppppqpqpppppppRPQPPLAPTTDPAGAGEPSGAVPQP 2962
                        3050      3060      3070      3080      3090      3100      3110      3120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  3018 WLGALVPGRVAVPR-RVSSPAPSRETPASSTPSLRRHATSRVSSWASSLALHEETDHGPVSLKQTLWSPDDTEESDDSSV 3096
Cdd:PHA03247 2963 WLGALVPGRVAVPRfRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALHEETDPPPVSLKQTLWPPDDTEDSDADSL 3042
                        3130      3140      3150      3160      3170      3180      3190      3200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  3097 DSD-PGRFDLEA---PDPDDPDPFAHPPDPNTPEAGARASPSSHFGPPPLSANAALSRRYVRSTGRSALAVLIEACRRIR 3172
Cdd:PHA03247 3043 FDSdSERSDLEAldpLPPEPHDPFAHEPDPATPEAGARESPSSQFGPPPLSANAALSRRYVRSTGRSALAVLIEACRRIR 3122
                        3210      3220
                  ....*....|....*....|....*....
gi 83722605  3173 RQLRRTRHALLDRSGAVLTGLYHVRMLLG 3201
Cdd:PHA03247 3123 RQLRRTRHALLDRSGAVLTGLYHVRMLLG 3151
Herpes_UL36 pfam03586
Herpesvirus UL36 tegument protein; The UL36 open reading frame (ORF) encodes the largest ...
1373-1622 1.20e-75

Herpesvirus UL36 tegument protein; The UL36 open reading frame (ORF) encodes the largest herpes simplex virus type 1 (HSV-1) protein, a 270-kDa polypeptide designated VP1/2, which is also a component of the virion tegument. A null mutation in the UL36 gene of herpes simplex virus type 1 results in accumulation of unenveloped DNA-filled capsids in the cytoplasm of infected cells. This family only covers a small central part of this large protein.


Pssm-ID: 427378 [Multi-domain]  Cd Length: 251  Bit Score: 252.47  E-value: 1.20e-75
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   1373 ERWAADVEAALDRVETRAEFDAVELRRLQALAARNGYSPRDFRKRAEQALAANAATATLALEAAFAFNPYTPENQHhpTL 1452
Cdd:pfam03586    3 ERWRSDIRALLERDEDDGEFDLDELDRLRDEAETGGYDAVDLIKRARQVVDARAQLGLRALETVFAFNPYTPQNSQ--AL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   1453 PPLAALHRVDWGPAFGAAAETYAEMFRVDTEPLARLLRLAGGLLDLAQAG-GGFIDYHEAVSRLAEDLNGVPSLRRYVPF 1531
Cdd:pfam03586   81 PPLALLESITWIDAFPGAADTYTYLFGVSVEKLKALLRIGEEILEAADAAnDGNIDYHAFVLTLSGDLFQVPALTEYVDF 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   1532 FRRGHAEYLELCARLDALRAGVHRALGGVPLDLAAAAEQTVRLRGDPAAAAELVRTGVALACPSEDALAACVGALERVDQ 1611
Cdd:pfam03586  161 YVRSYELFLDIRAALAELRADARGALGRVALEQLAALEEAAEVRRDPEAAKEALERGVRITLPSEDALTAMREGLKLEDK 240
                          250
                   ....*....|.
gi 83722605   1612 TPVKDSAYAEY 1622
Cdd:pfam03586  241 KQFEGTAYLEY 251
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
1-3201 0e+00

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 4070.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605     1 MAPRGDRGIVVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGGGPPRMCSA 80
Cdd:PHA03247    1 MARRGDRGIVVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGSGPPRMCSI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605    81 VELPTFLEYPSGRGLRCVFSRVYGEVAFFGKPSPGLLETQCPAHDFFAGPWARRPLSYTLVTVGALGMGLYRDGDDAYLF 160
Cdd:PHA03247   81 VELPTFLEYPSGRGLRCVFSRVYGEVAFFGEPAPGLLETQCPAHDFFAGPWARRPLSYTLVTIGALGMGLYRDGDTAYLF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   161 DPHGLREGSPAFVAKVRAGEVYTYLTYYTQAHPEARWAGAMVFFVPSGPGPATPAALAAAVLQLYGASETYLQDEPFVER 240
Cdd:PHA03247  161 DPHGLREGSPAFVAKVRAGEVYTYLTYYTQDHPEARWAGAMVFFVPSGPGPAAPADLTAAALHLYGASETYLQDEPFVER 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   241 DVVASHPLRGD-DVPGATVLVGGGAVRPPGPARPATPKAPSPRPAPPAAPPAAAAeptapgaaapspGVWGAALA-GAPL 318
Cdd:PHA03247  241 RVVISHPLRGDiAAPAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPD------------GVWGAALAgAPLA 308
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   319 ALPAPPRPDPAPADDPEDADGEDGAMEVVSPLPHPNQHYPLGFSKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRARRAA 398
Cdd:PHA03247  309 LPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPLPRPRQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSA 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   399 RHAASPFARGTGGDDQTRpaapapastpaptpapgstPAPPsTPASAPASTAPsgpatpaptsapapspptlapGGPAAQ 478
Cdd:PHA03247  389 RHAATPFARGPGGDDQTR-------------------PAAP-VPASVPTPAPT---------------------PVPASA 427
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   479 PRPPETPLPTPTPDSGESPAPPPEPQPPRPAADAAEPAPDDATRKALDALRERRPPEPPTGGLAELLGRHPDTGGAVARL 558
Cdd:PHA03247  428 PPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGADLAELLGRHPDTAGTVVRL 507
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   559 AEREATIGREVAECSRLTVNALRSPFPDAPGLLQHCVVLLFERVLAFLIENGARTHAGAGAEGPAAALLDLTLSLLPSRT 638
Cdd:PHA03247  508 AAREAAIAREVAECSRLTINALRSPFPASPGLLQHCVIFLFERVLAFLIENGARTHAGAGAEGPAAALLDLTLSLLPRRT 587
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   639 AVGDFLASTRMTLADVAAHVPLIQPVLEEGSGVGRLALAKLVLVARDVIRTTDEFHGELAELERRLRETPPPEVYARLSE 718
Cdd:PHA03247  588 AVGDFLASTRMTLADVAAHLPLIQPVLDEGSGVGRLALAKLVLVARDVIRETDAFHGELAELERQLRATPPAEVYARLSE 667
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   719 WLLERSRAGPDTLFAPATPTHPEPLLQRVQALAGFARAEETRAAAEDREVRGALDALARGVGAVARRSGPLTVAPAPPAA 798
Cdd:PHA03247  668 WLLERSRAGPDTLFAPATPTHPEPLLQRVQALAGFARGEEIRAAAEDREVRGALDALARGVDAVARRAGPLTVAPAPAAP 747
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   799 PLEPPGGSGGprpqpLSPEAIRVRLEQVRAEGQAAIEGATREYFQRGAAYSAKALLAGDARDRRFHVASAPVVPVGQLLE 878
Cdd:PHA03247  748 GGQGAPRPPP-----LSPEAIRVRLEQVRAQGQRAIEGAVKEYFHRGAVYSAKALLAGDARDRRFHVASAPVVPVVQLLE 822
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   879 SLPAFDARVREVAGRARVPAPPALATSPQAELLRELVQRGRDLEAPADLAAWLASLGDAAGQGLVARKELDELTKAVHQI 958
Cdd:PHA03247  823 SLPAFDAHVREVAQRARVPAPPPLATSPQAILLRELLQRGQDLEAPADLAAWLASLGDAAGQGLVERKELDELARAIHKI 902
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   959 NERAVRRSSGLAELERFEALDAALRRELESEAA-FGPAGAAGDGDAGGPPPETRRLAEDALRQAKAMAAAKLTDELSPEA 1037
Cdd:PHA03247  903 NERQVRRSSGLAELERFEALDAALRQELESEAAfVPAPGAAPYADAGGLSPETRRLAEDALRQAKAMAAAKLTDELSPEA 982
                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1038 RERLAARVRAIEAMLEEARERAEAARAARARFFQKLQGVLRPLPDFGGLRVAPAVLATLRADLPGGWTGLPEAAQAAPPE 1117
Cdd:PHA03247  983 RERLRARARAIEAMLEEARERAEAARAARERFFQKLQGVLRPLPDFGGLRAAPAVLATLRADLPGGWTDLPDAAQAAPPE 1062
                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1118 ARAALRADLWGLLGQYREALEHPTPDTATALSGLHPNFAEVLRELFPAAPETPLLVRFFSDHAPRLTRAVSEAIAAGSAA 1197
Cdd:PHA03247 1063 VRAALRADLWGLLGQYREALEHPTPDTATALSGLHPNFVEVLRDLFPAAPETPLLVQFFSDHAPRIARAVSEAINAGSAA 1142
                        1210      1220      1230      1240      1250      1260      1270      1280
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1198 VATASPESTAGAAATARAVLAETVAALSPAVLDPACPLAFLVALADSAAGYEKAARLALDARRAIARLGALGAAAADLAV 1277
Cdd:PHA03247 1143 VATASPESTVDAAVRAHGVLADAVAALSPAVRDPACPLAFLVALADSAAGYVKATRLALDARRAIARLGALGAAAADLAV 1222
                        1290      1300      1310      1320      1330      1340      1350      1360
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1278 AVRRENPQAEGDRAELLEAAARAVAAAREGLVACEGEFGGLLHAEGSAGDPSPSGRALQELGKVVGATRRRADELEAAAA 1357
Cdd:PHA03247 1223 AVRRENPQAEGDRAALLEAAARAVTAAREGLAACEGEFGGLLHAEGSAGDPSPSGRALQELGKVVGATRRRADELEAAAA 1302
                        1370      1380      1390      1400      1410      1420      1430      1440
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1358 DLAEKIAARDARAGRERWAADVEAALDRVETRAEFDAVELRRLQALAARNGYSPRDFRKRAEQALAANAATATLALEAAF 1437
Cdd:PHA03247 1303 DLAEKMAARRARASRERWAADVEAALDRVENRAEFDAVELRRLQALAATHGYNPRDFRKRAEQALAANAKTATLALEAAF 1382
                        1450      1460      1470      1480      1490      1500      1510      1520
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1438 AFNPYTPENQHHPTLPPLAALHRVDWGPAFGAAAETYAEMFRVDTEPLARLLRLAGGLLDLAQAGGGFIDYHEAVSRLAE 1517
Cdd:PHA03247 1383 AFNPYTPENQRHPMLPPLAAIHRIDWGPAFGAAAETYAEMFRVDTEPLARLLRLAGGLLELAQAGGGFIDYHEAVSRLAE 1462
                        1530      1540      1550      1560      1570      1580      1590      1600
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1518 DLNGVPSLRRYVPFFRRGHAEYLELCARLDALRAGVHRALGGVPLDLAAAAEQTVRLRGDPAAAAELVRTGVALACPSED 1597
Cdd:PHA03247 1463 DLNGVPSLRRYVPFFRRGHAEYLELCDRLDALRADVHRALGGVPLDLAAAAEQTSRLRNDPAAAAELVRTGVTLACPSED 1542
                        1610      1620      1630      1640      1650      1660      1670      1680
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1598 ALAACVGALERVDQTPVKDSAYAEYVAFVARRDLAEAKDALVRAKQQRAEATDRVTAALREALAAHERQARSEAESLANL 1677
Cdd:PHA03247 1543 ALAACVGALERVDQSPVKDTAYAEYVAFVARRDLAEAKDALVRAKQQRAEATDRVTAALREALAAHERRAQSEAESLANL 1622
                        1690      1700      1710      1720      1730      1740      1750      1760
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1678 KTLLRVAAIPAAAAKTLDQARSVPEIVDQIELLLEQTEKAAELDSAAVDWLEHARRVFEAHPLTAAREGAPDPLARLHER 1757
Cdd:PHA03247 1623 KTLLRVAAIPATAAKTLDQARSVAEIVDQIELLLEQTEKAAELDVAAVDWLEHARRVFEAHPLTAARGGGPDPLARLHAR 1702
                        1770      1780      1790      1800      1810      1820      1830      1840
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1758 LDALGETRRRTSALRRSLEAAEGEWDEVWARFGRARGGAWKSPEALAAAREQLLALQTATNTVLGLVADAHYGRLPARYR 1837
Cdd:PHA03247 1703 LDALGETRRRTEALRRSLEAAEAEWDEVWGRFGRVRGGAWKSPEALRAAREQLRALQTATNTVLGLRADAHYERLPAKYQ 1782
                        1850      1860      1870      1880      1890      1900      1910      1920
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1838 GAVGAKTAERAGAVEELGAAVARHDGLLARLREEVVGRVPWEMNADALGRLLAEFDALAKDLTPWAVDEFRGARALVQHR 1917
Cdd:PHA03247 1783 GALGAKSAERAGAVEELGAAVARHDGLLARLREEVVARVPWEMNADALGRLLAEFDALAGDLAPWAVDEFRGARALVQHR 1862
                        1930      1940      1950      1960      1970      1980      1990      2000
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1918 LGLYSAYAKARAHTGAGGGAPPAPLLVDVRALEARARRPGERHEPDPRAVRSRGEAYLRASGDPGPLELREATSELDLPF 1997
Cdd:PHA03247 1863 LGLYSAYAKARAQTGAGGAAPPAPLLVDLRALEARARSPPERHEPDPRMVRRRGEAYLRASGDPGPLELREATSELDLPF 1942
                        2010      2020      2030      2040      2050      2060      2070      2080
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1998 ATSYLTPDGTPLQYALCFPAVTDKLGALLMRPEAARARPPLPPEGLESTQTLAAMCTVPLITHLQLALSDAQGEGFRLFG 2077
Cdd:PHA03247 1943 ATSYLAPDGTPLQYALCFPAVTDKLGALLMRPEAARARPPLPTEGLESTQTLAAMCTVPLITRLQLALSDAQGAGFRLFG 2022
                        2090      2100      2110      2120      2130      2140      2150      2160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2078 RFVRHRQPAWRDSVAAAAELYAALAATTLTREFGCRWDELGWARGEGALAPLAEPAGARRPRVTFSINDLMVALVAGTPE 2157
Cdd:PHA03247 2023 RFVRHRQPAWRDSMAAAAELYAALVATTLTREFGCRWDELGWARGAAAPAPLAEPAGSRRPRVTFNENDVMVALVAGTPE 2102
                        2170      2180      2190      2200      2210      2220      2230      2240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2158 HIYNFWRLDLVLQHEYMHLTLPAAWETGAGTILFVQRLTPHARPEVRVLPAVPAGPPPATGLLFGTRLADWRHGKLSPSD 2237
Cdd:PHA03247 2103 HIYNFWRLDLVLQHEYMHLTLPAAWETGAGSILFVQRLTPHPDPEVRVLPAVPAGPPPATGLLFGTRLADWRHGKLSESD 2182
                        2250      2260      2270      2280      2290      2300      2310      2320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2238 PLAPWRAAPELAAGGAAAALGGLDGPRALVAVSVLGRMCLPSAALAALWSCMFPDGYSEYDSLDALLEARLGSGRAPDPQ 2317
Cdd:PHA03247 2183 PLAPWRAAPELAAGGAAAALGGLSGPRALVAVSVLGRMCLPSAALAALWSCMFPDGYSEYDSLDALLAARLGSGRTPDPQ 2262
                        2330      2340      2350      2360      2370      2380      2390      2400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2318 GGREDAPAPPAHALYRPSGQRVLVRGGPPDPAARVTVMDLVLAATLLGAPVVVALRSDPAFSEGSELELCVTLFDSRARA 2397
Cdd:PHA03247 2263 GGREDSPAPPAHALYRPSGQRVLVRGGAPDPAARVTVMDLVLAATLLGAPVVVALRSDPAFSRGSELELCVTLFDSRARG 2342
                        2410      2420      2430      2440      2450      2460      2470      2480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2398 ADAALREVVSADVETWATDLLHADLNAIENACLAAQLPALSALVAARPLARSPPCLVIVDISMAPLFVLWEQPDPPGPPD 2477
Cdd:PHA03247 2343 ADAALREVVSSDVETWAVDLLHADLNPIENACLAAQLPALSALIAARPLARSPPCLVLVDISMAPLFVLWEQPDPPGPPD 2422
                        2490      2500      2510      2520      2530      2540      2550      2560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2478 VRFVGSDEIEELPFVSPGGDVLAGLAAEGDPFFAQTILGAPFSLSRLLREAFPGAPAYRRPAEARFPFAAGGA----PDP 2553
Cdd:PHA03247 2423 VRFVGSEEIEELPFVSPGGDVLAGLAADGDPFFARTILGAPFSLSLLLGELFPGAPVYRRPAEARFPFAAGAApdpgGGG 2502
                        2570      2580      2590      2600      2610      2620      2630      2640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2554 DPDPDAPPAPSRPTPAILPDEPVGEAVHPRMLTWIRGLEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAV 2633
Cdd:PHA03247 2503 PPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTWIRGLEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAV 2582
                        2650      2660      2670      2680      2690      2700      2710      2720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2634 GSRAHRPDAPPQPARPRAPGDDSGSSPGQAAPASLPPDTPRPDPPPPGPRPRATEpggggaaaapdPDPRPPTTVPPPER 2713
Cdd:PHA03247 2583 TSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANE-----------PDPHPPPTVPPPER 2651
                        2730      2740      2750      2760      2770      2780      2790      2800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2714 PRNAPAPGRVSLPRRATRPGRPAGASSPPRRPTRRAARPAVGSLTSLAD--PPPPEPEPRPATPATPATPATPATPATPA 2791
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADppPPPPTPEPAPHALVSATPLPPGPAAARQA 2731
                        2810      2820      2830      2840      2850      2860      2870      2880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2792 TPATPATPATPATPATPATPATPATPATPATPATPPSAAAAADRASAPPATTTPPAGSSAAVATAAAPLPSDASPAPAAA 2871
Cdd:PHA03247 2732 SPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAV 2811
                        2890      2900      2910      2920      2930      2940      2950      2960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2872 TPPASALNPAARPATLEpptttaapaASAASAASAAHATPSEPSPEPTPPGGSVAPGGDLRRRGPAGSAPPKVAAPPHPP 2951
Cdd:PHA03247 2812 LAPAAALPPAASPAGPL---------PPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPP 2882
                        2970      2980      2990      3000      3010      3020      3030      3040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2952 VRRMARPAVSRSTESFALPPDGPERPRTPAAATEAAPETPA--------------RPDAPLAPTTDTAGVGEASGVVPDP 3017
Cdd:PHA03247 2883 VRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPppppqpqpppppppRPQPPLAPTTDPAGAGEPSGAVPQP 2962
                        3050      3060      3070      3080      3090      3100      3110      3120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  3018 WLGALVPGRVAVPR-RVSSPAPSRETPASSTPSLRRHATSRVSSWASSLALHEETDHGPVSLKQTLWSPDDTEESDDSSV 3096
Cdd:PHA03247 2963 WLGALVPGRVAVPRfRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALHEETDPPPVSLKQTLWPPDDTEDSDADSL 3042
                        3130      3140      3150      3160      3170      3180      3190      3200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  3097 DSD-PGRFDLEA---PDPDDPDPFAHPPDPNTPEAGARASPSSHFGPPPLSANAALSRRYVRSTGRSALAVLIEACRRIR 3172
Cdd:PHA03247 3043 FDSdSERSDLEAldpLPPEPHDPFAHEPDPATPEAGARESPSSQFGPPPLSANAALSRRYVRSTGRSALAVLIEACRRIR 3122
                        3210      3220
                  ....*....|....*....|....*....
gi 83722605  3173 RQLRRTRHALLDRSGAVLTGLYHVRMLLG 3201
Cdd:PHA03247 3123 RQLRRTRHALLDRSGAVLTGLYHVRMLLG 3151
PHA03246 PHA03246
large tegument protein UL36; Provisional
6-2505 0e+00

large tegument protein UL36; Provisional


Pssm-ID: 223020 [Multi-domain]  Cd Length: 3095  Bit Score: 896.26  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605     6 DRGIVVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGGGPPRMCSAVELPT 85
Cdd:PHA03246   73 DFTIVAVGIRNQFAPDLSPGSSVSCLRSSLAFLRIVFAYGLDTVLSADAIDRLLLQGKDWTIHTSDDGVYTTCVPHDLPN 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605    86 FLEYPSGRGLRCV-FSRVYGEVAFF-GKPSPGLLETQCPAHDFFAGPWA-RRPLSYTLVTVGALGMGLYRDGDDAYLFDP 162
Cdd:PHA03246  153 RILSKDPGGNLCVaFSSSYGESEFYlDENTPTILDTQISARTFIERVWKqKRGDIYCLIVIGVLGIGVYRSEDGIYIFDP 232
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   163 HGLREGSPAFVAKVRAGEVYTYLTYYTQAHPEARWAGAMVFFVPSGPGPATPAALAAAVLQLYGASETYL---------- 232
Cdd:PHA03246  233 HGHGHIGQACIVRVSEGYFYQYLTSYADPSGMPDWSATFVYFVSTASSAPPKEEIISAVSRLYGTADIVLdlgradeedn 312
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   233 ------------QDEPFVERDVVASHPLRGDDVPGATVL---VGGGAVRPPGPAR-------------PATPKAPSPRPA 284
Cdd:PHA03246  313 lkvvsadfdppsRPQPWQTKIVIGTADSYADSSPKLHSEstdLTPHEHGEYDPSTlvggastninisdPPARTDCRRYSE 392
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   285 PPAAPPAAAAEPTAPGAAAPSPGVWGAALAGAPLALPAPPRPDPAPADDPEDADGEDgamevVSPLPHPNQHYPLgfSKR 364
Cdd:PHA03246  393 GSVIHESVDSHIEDVTEATSVVAAWSDAFSDISEDYSHLTRPDLPATAHDVSKNGHD-----TKSDRRSRGSNSR--HKR 465
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   365 RRPTWTPPSSLEDLSA---GRHHPKRASLPTRARRAARHaaspfargtggddqtrpaapapastpaptpapGSTPAPPST 441
Cdd:PHA03246  466 RRPSWTPPSSSENVSSdgpTFSQSRKPSRKSKRALDLDY--------------------------------GHLSNEPSD 513
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   442 PASAPASTAPSGPATPaptsapapspptlapggPAAQPRPPETPLPTPTPDSGESPapppepqpprpaadaaepapddat 521
Cdd:PHA03246  514 VDGENSDSPAGAISNI-----------------PDNVSFNEFISSQARAEDSIEHL------------------------ 552
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   522 rkaldALRERRP--PEPPTGGLAELL----------GRHPdtggaVARLAEREATIGREVAECSRLTVNALRSPFPDApG 589
Cdd:PHA03246  553 -----SLRNRPVfnPHTVTGNLDNTLrdslwndeysGSYP-----LSDISDMIDDITESIADGMRLVVHTSHRGDYDG-G 621
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   590 LLQHCVVLLFERVLAFLIENGARTHAGAGAEGPAAALLDLTLSLLPSRTAVgdFLASTRMTLADVAAHVPLIQPVLEEGS 669
Cdd:PHA03246  622 LLDVCIMDVFTRLFNYIIENGARTTTDRASVVEPEMAALTKAFTTPSHFST--FISSTGMSLSEASESADLIESVLTENS 699
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   670 GVGRLALAKLVLVARDVIRTTDEFHGELAELERRLRETPPPEVYARLSEWLLERSRAGPDTLFAPATPTHPE-PLLQRVQ 748
Cdd:PHA03246  700 KIGKLALSKLTLVALEVEEATDTLHKSLDAIEREASTADPDRIYERMATVLVDTFYRNSGKLYSETTSYNSDqTLTDRVV 779
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   749 ALAGFARAEETRAAAEDREVRGALDALARGVgavarRSGPLTVAPAPPAAPLEPPGGSGGPRPQPLSPEAIRVRLEQVra 828
Cdd:PHA03246  780 SLCEFIRDRENVATRKAELILAEIEALDAGV-----RWMNTKFDAFIMGGSGGMSPAKGLSAIAKTSTDVVTQRLESI-- 852
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   829 eGQAAIE---GATREYFQRGAAYSAKALLAGDARDRRFH-VASAPVVPVGQLLESLPAFDARVREVAGRARVPAPPALAT 904
Cdd:PHA03246  853 -GKAAIDivgNALREYYLKCALYSAKALRADMKETSRFKiVVTEQLEKMTRLLSSLSVIDDVILLIASRSDARVPVPVSK 931
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   905 SPQAELLRELVQRGRDLEAPADLAAWLASLGDAAGQGLVARKELDELTKAVHQINERAVRRSSGLAELERFEALDA--AL 982
Cdd:PHA03246  932 ALESQLLGDLLEIGSHLDVPENLVTWKGLMVSVQTGGWISRRELDLLLKEVDAVNDNAARRETALTELERLHELESriAS 1011
                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   983 RRELESeaafgpagaagdGDAGGPPPETRRLAEDALRQAKAMAAAKLTDELSPEARERLAARVRAIEAMLEEARERAEAA 1062
Cdd:PHA03246 1012 YTDLET------------TVDLQKLDEALKLANSIVKLTKGLDGAKLASSLSSDIREKIRQKRSETETLIARLSARYAEV 1079
                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1063 RAARARFFQKLQGVLRPLPDFGGLRVAPAVLATLRADLPGGWTGLPEAAQAAPPEARAALRADLWGLLGQYREALEHPTP 1142
Cdd:PHA03246 1080 KAAVDGLYSSIRKLLRPLQNFAGLRALDSTVKTITDSIPPGMGSFESFLASAPPDVIGALRSDLWVLFTQYKTILSRPST 1159
                        1210      1220      1230      1240      1250      1260      1270      1280
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1143 DTATALSGLHPNFAEVLRELFPAAPETPLLVRFFSDHAPRLTRAVSEAIAAGSAAVATASPESTAGAAATARAVLAET-- 1220
Cdd:PHA03246 1160 GTAAELSGLGGPFALAIRVILGPEGEYPAASVFFGKHADVLSAALAAAASEPMSVEKTSAAVSVLKEAISDINRADATip 1239
                        1290      1300      1310      1320      1330      1340      1350      1360
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1221 ---VAALSPAVLDPAcpLAFLVALADSAagyEKAARLALDARRA---IARLGALGAAAADLAVAVRRENPQ---AEGDRa 1291
Cdd:PHA03246 1240 qqgIMADLSTERADA--FSFLHALLSDA---EGAADVASRGAYLstlIRTVRDSLEAVIDSITKIKSLDPKtytYNTDA- 1313
                        1370      1380      1390      1400      1410      1420      1430      1440
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1292 elleaaaravaaarEGLVACEGEFGgllHAEGSAGDPSPSGRALQ---------------ELGKVVGATRRRADELEAAA 1356
Cdd:PHA03246 1314 --------------SVIVSAKAEVS---AATQQAGDCKDALTALEnepltynphiqrkiaELNKLIESVNQRVGELDIAL 1376
                        1450      1460      1470      1480      1490      1500      1510      1520
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1357 ADLAEKIAARDARAGRERWAADVEAALDRVETRAEFDAVELRRLQALAARNGYSPRDFRKRAEQALAANAATATLALEAA 1436
Cdd:PHA03246 1377 QTYERNRISAERSRSEDLWTSSITSLLVNAEIKSEFDAMEINSLEETARNAGYDTIRFKSRAEKIVSAHARVVENAIETV 1456
                        1530      1540      1550      1560      1570      1580      1590      1600
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1437 FAFNPYTPENQHHPTLPPLAALHRVDWGPAFGAAAETYAEMFRVDTEPLARLLRLAGGLLDLAQAGGGFIDYHEAVSRLA 1516
Cdd:PHA03246 1457 LKFNPYSTTNIIHGLKPPIAALKNITWGDAFFAAAPYYTKLFGVNCDVLISLLKILFAILRHASAHPGNLDYYFLVGEIE 1536
                        1610      1620      1630      1640      1650      1660      1670      1680
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1517 EDLNGVPSLRRYVPFFRRGHAEYLELCARLDALRAGVHRALGGVPLDLAAAAEQTVRLRgDPAAAAELVRTGVALACPSE 1596
Cdd:PHA03246 1537 SDLRAIPSLAKYVDFYRRGHDSFEGFLARLEQMRVEALHASGRVSIEISDALETLARTH-SPEGARRALEYGVSIVIPSA 1615
                        1690      1700      1710      1720      1730      1740      1750      1760
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1597 DALAACVGALERVDQTPVKDSAYAEYVAFVARRDLAEAKDALVRAKQQRAEATDRVTAALREALAAHERQARSEAESLAN 1676
Cdd:PHA03246 1616 NTIMSIADALQKEKITELDGTAYAEYSAHILRRDNDAIKSITQRVTTAIEAAKSRGESILKDLAEASYAADRETAEQLAN 1695
                        1770      1780      1790      1800      1810      1820      1830      1840
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1677 LKTLLRVAAIPAAAAKTLDQARSVPEIVDQIELLLEQTEKAAELDSAAVDWLEHARRVFEAHPLTAAREGApDPLARLHE 1756
Cdd:PHA03246 1696 LKNLLRLVAMPAHIAKAIDKAETANDIVTQAALLLTKVEETKELDTQTVEWLKHAESVIDSHDLTVRIDES-GPMTIYAE 1774
                        1850      1860      1870      1880      1890      1900      1910      1920
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1757 RLDALGETRRRTSALRRSLEAAEGEWDEVWARFGRARGGAWKSPEALAAAREQLLALQTATNTVLGLVADAHYGRLPARY 1836
Cdd:PHA03246 1775 RIDALVRLENRLAELKSELALAEVAWDDTWSTFIHDKDRIDKSSEGFSAARESAARAKVSTNAINALRNNAEYNRLPAKI 1854
                        1930      1940      1950      1960      1970      1980      1990      2000
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1837 RGAVGAKTAERAGAVEELGAAVARHDGLLARLrEEVVGRVPWEMNADALGRLLAEFDALAKDLTPWAVDEFRGARALVQH 1916
Cdd:PHA03246 1855 IGLIDSKYRDRTVVLDAFLDSMKEIEDTQKQM-EILCSKIPLTFSLNDLRAISSQFDDIAKRLPKWYVKQVGRYSRLIKL 1933
                        2010      2020      2030      2040      2050      2060      2070      2080
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1917 RLGLYSAYakarAHTGAGGGAPPAPLLVDVRALEArarrpGERHEPDPRAV----RSRGEAYLRASgdpGPLELREATSE 1992
Cdd:PHA03246 1934 RLALYAAY----SNASTGPIGDPPLLPFDTGRANI-----AANMAPSVGLVdrylKHRVAAWIRPK---VVATLQEAFSE 2001
                        2090      2100      2110      2120      2130      2140      2150      2160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  1993 LDLPFATSYLTPDGTPLQYALCFPAVTDKLGALLMRPEAARARPPLPPEGLESTQTLAAMCTVPLITHLQLALSDAQGEG 2072
Cdd:PHA03246 2002 IDMPGLTTYLDSTDTPLRYSICYRTVGEKLAACLCEPSAVNIKPRIPTNLISTVEMESAAGMLNDIMILRLGFVQACADR 2081
                        2170      2180      2190      2200      2210      2220      2230      2240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2073 FRLFGRFVRHRQPAW--RDSVAAAAELYAALAATTLTREFGCRWDELGWARGEgaLAPLAEPA--------GARRPRVTF 2142
Cdd:PHA03246 2082 FQLFTKYVRTGIHDWspDYCIKAHGTIYCALIAITLTRKTGSNLSDIYFIPGQ--YGPTIDKKelkkfaanGRRRQVVRL 2159
                        2250      2260      2270      2280      2290      2300      2310      2320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2143 SINDLMVALVAGTPEHIYNFWRLDLVLQHEYMHLTLPAAWETGAGTILFVQRLTPH------ARPEVRVLPAVPAGPPPA 2216
Cdd:PHA03246 2160 DPADVMVTIMACTPGHVLTFSKLDLINQYDFMDKTLYNVLTDSISTVAFVNCLSTQlskdgkVDPNCRPLSLTGGEWDPS 2239
                        2330      2340      2350      2360      2370      2380      2390      2400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2217 TGLLFGTRLADWRHGKLSPSDPLAPWRAAPELAAGGAAAALGGLDGpRALVAVSVLGRMCLPSAALAALWSCMFPDGYSE 2296
Cdd:PHA03246 2240 GGSLFAIRYSDWKQGRLSDTDPLKPWEDISGDEGAGLAKIRAVVPS-SLLTTTTVLARMCIPPTALAVMWSSLLPDGIEQ 2318
                        2410      2420      2430      2440      2450      2460      2470      2480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2297 ----YD-----------SLDALLEARLGSGRAPDPQGgrEDAPappahALYRPSGQRV--LVRGGPPDPAARVTVMDLVL 2359
Cdd:PHA03246 2319 tcksYDdvvtargdgasTLDVTTSTIDHTGVKNIQTN--LDCP-----NLYEYTGTATtfTVVSTPPSRVLKVNAMDIAA 2391
                        2490      2500      2510      2520      2530      2540      2550      2560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605  2360 AATLLGAPVVVALRSDPAFSEGSELELCVTLFDSRARAAD-AALREVVSADVETWATDLLHADLNAIENACLAAQLPALS 2438
Cdd:PHA03246 2392 CATLFGARIVIAAECPEAYSSDSGLSLCIRLFDSRSGSKGcFLEPGAVSSDITSWGAKLLAADSNPIENACLGQQLEHLS 2471
                        2570      2580      2590      2600      2610      2620
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 83722605  2439 ALVAARPLARSPPCLVIVDISMAPLFVLWEQPDPPGPPDVRFVGSDE--IEELPFVSPGGDVLAGLAAE 2505
Cdd:PHA03246 2472 HLIASKPLSSAPPCLVIVDAGMVPVKVLWAKEELDPIPIIRLTSADDalISELPYIDAGIRGETGADFQ 2540
Herpes_UL36 pfam03586
Herpesvirus UL36 tegument protein; The UL36 open reading frame (ORF) encodes the largest ...
1373-1622 1.20e-75

Herpesvirus UL36 tegument protein; The UL36 open reading frame (ORF) encodes the largest herpes simplex virus type 1 (HSV-1) protein, a 270-kDa polypeptide designated VP1/2, which is also a component of the virion tegument. A null mutation in the UL36 gene of herpes simplex virus type 1 results in accumulation of unenveloped DNA-filled capsids in the cytoplasm of infected cells. This family only covers a small central part of this large protein.


Pssm-ID: 427378 [Multi-domain]  Cd Length: 251  Bit Score: 252.47  E-value: 1.20e-75
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   1373 ERWAADVEAALDRVETRAEFDAVELRRLQALAARNGYSPRDFRKRAEQALAANAATATLALEAAFAFNPYTPENQHhpTL 1452
Cdd:pfam03586    3 ERWRSDIRALLERDEDDGEFDLDELDRLRDEAETGGYDAVDLIKRARQVVDARAQLGLRALETVFAFNPYTPQNSQ--AL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   1453 PPLAALHRVDWGPAFGAAAETYAEMFRVDTEPLARLLRLAGGLLDLAQAG-GGFIDYHEAVSRLAEDLNGVPSLRRYVPF 1531
Cdd:pfam03586   81 PPLALLESITWIDAFPGAADTYTYLFGVSVEKLKALLRIGEEILEAADAAnDGNIDYHAFVLTLSGDLFQVPALTEYVDF 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   1532 FRRGHAEYLELCARLDALRAGVHRALGGVPLDLAAAAEQTVRLRGDPAAAAELVRTGVALACPSEDALAACVGALERVDQ 1611
Cdd:pfam03586  161 YVRSYELFLDIRAALAELRADARGALGRVALEQLAALEEAAEVRRDPEAAKEALERGVRITLPSEDALTAMREGLKLEDK 240
                          250
                   ....*....|.
gi 83722605   1612 TPVKDSAYAEY 1622
Cdd:pfam03586  241 KQFEGTAYLEY 251
Herpes_teg_N pfam04843
Herpesvirus tegument protein, N-terminal conserved region;
15-185 1.89e-40

Herpesvirus tegument protein, N-terminal conserved region;


Pssm-ID: 428153 [Multi-domain]  Cd Length: 159  Bit Score: 147.91  E-value: 1.89e-40
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605     15 RNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAW--TRASAGGGPPR-MCSAVELPTFLEYPS 91
Cdd:pfam04843    2 RHQFDCKFGPAAGSQCLSNCLSFLVSSYLNGIRPVLSREALDGILEEGARLdaLLRTSGMLPPRqYAQLHELPGYVRTGA 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605     92 GRGLRCVFSRVYGEVAF-FGKPSPGllETQcpahdffagpwarrplsYTLVTVGALGMGLYRDGDDAYLFDPHGLREG-- 168
Cdd:pfam04843   82 WGCKIRRSSEIYGLLGHeLSRNFNG--TPQ-----------------YCLITCGSLAGAIVIKGKTYYLFDPHCTPEGns 142
                          170
                   ....*....|....*..
gi 83722605    169 SPAFVAKVRAGEVYTYL 185
Cdd:pfam04843  143 TAAVIVTVSAGDVYEYL 159
DUF3584 pfam12128
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ...
1620-1811 1.54e-03

Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.


Pssm-ID: 432349 [Multi-domain]  Cd Length: 1191  Bit Score: 44.44  E-value: 1.54e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   1620 AEYVAFVARRDLaEAKDALVRAKQQRA---EATDRVTAALREALAAHERQARSEAES-LANLK-TLLRVAAIPAAAAKTL 1694
Cdd:pfam12128  375 AKYNRRRSKIKE-QNNRDIAGIKDKLAkirEARDRQLAVAEDDLQALESELREQLEAgKLEFNeEEYRLKSRLGELKLRL 453
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 83722605   1695 DQARSVPEIVDQIELLLEQTEKAAELDSAA---VDWLEHARRVFEahpltAAREGAPDPLARLHERLDalgETRRRTSAL 1771
Cdd:pfam12128  454 NQATATPELLLQLENFDERIERAREEQEAAnaeVERLQSELRQAR-----KRRDQASEALRQASRRLE---ERQSALDEL 525
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 83722605   1772 RRSLEAAEGEWDEvwarFGRARGGAWKSPEALAAAREQLL 1811
Cdd:pfam12128  526 ELQLFPQAGTLLH----FLRKEAPDWEQSIGKVISPELLH 561
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH