2BH2: Crystal Structure of E. coli 5-methyluridine methyltransferase RumA in complex with ribosomal RNA substrate and S-adenosylhomocysteine

PDB ID: 2BH2Download
MMDB ID: 86799
PDB Deposition Date: 2005/1/6
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.15  Å
Source Organism:
Similar Structures:
Biological Unit for 2BH2: dimeric; determined by author and by software (PQS)
Molecular Components in 2BH2
Label Count Molecule
Protein (1 molecule)
1
23S rRNA (Uracil-5-)-methyltransferase Ruma
(Gene symbol: rlmD)
Molecule annotation
Nucleotide(1 molecule)
1
23S Ribosomal RNA 1932-1968
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
S-ADENOSYL-L-HOMOCYSTEINES-ADENOSYL-L-HOMOCYSTEINE
2
1
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303