4V6I: Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome

PDB ID: 4V6IDownload
MMDB ID: 171012
PDB Deposition Date: 2010/10/12
Updated in MMDB: 2021/03
Experimental Method:
electron microscopy
Resolution: 8.8  Å
Source Organism:
Similar Structures:
Entry 3IZS is obsolete, it has been replaced with 4V6I.
Molecular Components in 4V6I
Label Count Molecule
Proteins (80 molecules)
1
40S Ribosomal Protein Rack1 (Rack1)
Molecule annotation
1
40S Ribosomal Protein Rps0 (S2p)
Molecule annotation
1
40S Ribosomal Protein Rps3 (S3p)
Molecule annotation
1
40S Ribosomal Protein Rps4 (S4e)
Molecule annotation
1
40S Ribosomal Protein Rps9 (S4p)
Molecule annotation
1
40S Ribosomal Protein Rps2 (S5p)
Molecule annotation
1
40S Ribosomal Protein Rps7 (S7e)
Molecule annotation
1
40S Ribosomal Protein Rps5 (S7p)
Molecule annotation
1
40S Ribosomal Protein Rps22 (S8p)
Molecule annotation
1
40S Ribosomal Protein Rps16 (S9p)
Molecule annotation
1
40S Ribosomal Protein Rps20 (S10p)
Molecule annotation
1
40S Ribosomal Protein Rps14 (S11p)
Molecule annotation
1
40S Ribosomal Protein Rps23 (S12p)
Molecule annotation
1
40S Ribosomal Protein Rps18 (S13p)
Molecule annotation
1
40S Ribosomal Protein Rps29 (S14p)
Molecule annotation
1
40S Ribosomal Protein Rps13 (S15p)
Molecule annotation
1
40S Ribosomal Protein Rps17 (S17e)
Molecule annotation
1
40S Ribosomal Protein Rps11 (S17p)
Molecule annotation
1
40S Ribosomal Protein Rps15 (S19p)
Molecule annotation
1
40S Ribosomal Protein Rps19 (S19e)
Molecule annotation
1
40S Ribosomal Protein Rps21 (S21e)
Molecule annotation
1
40S Ribosomal Protein Rps25 (S25e)
Molecule annotation
1
40S Ribosomal Protein Rps26 (S26e)
Molecule annotation
1
40S Ribosomal Protein Rps27 (S27e)
Molecule annotation
1
40S Ribosomal Protein Rps28 (S28e)
Molecule annotation
1
40S Ribosomal Protein Rps30 (S30e)
Molecule annotation
1
Unknown 40S Ribosomal Protein XS1
Molecule annotation
1
Unknown 40S Ribosomal Protein XS2
Molecule annotation
1
40S Ribosomal Protein S24
Molecule annotation
1
60S Ribosomal Protein Rpl1 (L1p)
Molecule annotation
1
60S Ribosomal Protein Rpl2 (L2p)
Molecule annotation
1
60S Ribosomal Protein Rpl3 (L3p)
Molecule annotation
1
60S Ribosomal Protein Rpl4 (L4p)
Molecule annotation
1
60S Ribosomal Protein Rpl11 (L5p)
Molecule annotation
1
60S Ribosomal Protein Rpl6 (L6e)
Molecule annotation
1
60S Ribosomal Protein Rpl9 (L6p)
Molecule annotation
1
60S Ribosomal Protein Rpl8 (L7ae)
Molecule annotation
1
60S Acidic Ribosomal Protein Rpp0 (L10p)
Molecule annotation
1
60S Ribosomal Protein Rpl12 (L11p)
Molecule annotation
1
60S Ribosomal Protein Rpl16 (L13p)
Molecule annotation
1
60S Ribosomal Protein Rpl14 (L14e)
Molecule annotation
1
60S Ribosomal Protein Rpl23 (L14p)
Molecule annotation
1
60S Ribosomal Protein Rpl15 (L15e)
Molecule annotation
1
60S Ribosomal Protein Rpl28 (L15p)
Molecule annotation
1
60S Ribosomal Protein Rpl18 (L18e)
Molecule annotation
1
60S Ribosomal Protein Rpl19 (L19e)
Molecule annotation
1
60S Ribosomal Protein Rpl21 (L21e)
Molecule annotation
1
60S Ribosomal Protein Rpl22 (L22e)
Molecule annotation
1
60S Ribosomal Protein Rpl17 (L22p)
Molecule annotation
1
60S Ribosomal Protein Rpl25 (L23p)
Molecule annotation
1
60S Ribosomal Protein Rpl24 (L24e)
Molecule annotation
1
60S Ribosomal Protein Rpl26 (L24p)
Molecule annotation
1
60S Ribosomal Protein Rpl27 (L27e)
Molecule annotation
1
60S Ribosomal Protein Rpl29 (L29e)
Molecule annotation
1
60S Ribosomal Protein Rpl35 (L29p)
Molecule annotation
1
60S Ribosomal Protein Rpl30 (L30e)
Molecule annotation
1
60S Ribosomal Protein Rpl7 (L30p)
Molecule annotation
1
60S Ribosomal Protein Rpl31 (L31e)
Molecule annotation
1
60S Ribosomal Protein Pl32 (L32e)
Molecule annotation
1
60S Ribosomal Protein Rpl34 (L34e)
Molecule annotation
1
60S Ribosomal Protein Rpl33 (L35ae)
Molecule annotation
1
60S Ribosomal Protein Rpl36 (L36e)
Molecule annotation
1
60S Ribosomal Protein Rpl43 (L37ae)
Molecule annotation
1
60S Ribosomal Protein Rpl37 (L37e)
Molecule annotation
1
60S Ribosomal Protein Rpl38 (L38e)
Molecule annotation
1
60S Ribosomal Protein Rpl39 (L39e)
Molecule annotation
1
60S Ribosomal Protein Rpl40 (L40e)
Molecule annotation
1
60S Ribosomal Protein Rpl41 (L41e)
Molecule annotation
1
60S Ribosomal Protein Rpl42 (L44e)
Molecule annotation
2
Unknown Protein
Molecule annotation
1
Unknown Protein
Molecule annotation
2
60S Acidic Ribosomal Protein Rpp11 (P1)
Molecule annotation
2
60S Acidic Ribosomal Protein (P2)
Molecule annotation
1
60S Ribosomal Protein Rpl5 (L18p)
Molecule annotation
1
60S Ribosomal Protein Rpl13 (L13e)
Molecule annotation
1
60S Ribosomal Protein Rpl20 (L18ae)
Molecule annotation
1
60S Ribosomal Protein Rpl10 (L10e)
Molecule annotation
Nucleotides(6 molecules)
1
18S rRNA
Molecule annotation
1
P-site tRNA ASP
Molecule annotation
1
mRNA, RNA (5'-r(p*ap*ap*ap*ap*gp*ap*cp*up*up*cp*a)-3')
Molecule annotation
1
25S rRNA
Molecule annotation
1
5.8s rRNA
Molecule annotation
1
5S rRNA
Molecule annotation
* Click molecule labels to explore molecular sequence information.

Citing MMDB