3RAF: Quinazolinedione-Dna Cleavage Complex Of Type Iv Topoisomerase From S. Pneumoniae

PDB ID: 3RAFDownload
MMDB ID: 98332
PDB Deposition Date: 2011/3/28
Updated in MMDB: 2012/03
Experimental Method:
x-ray diffraction
Resolution: 3.24  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3RAF: octameric; determined by author and by software (PISA)
Molecular Components in 3RAF
Label Count Molecule
Proteins (4 molecules)
2
DNA Topoisomerase 4 Subunit a
Molecule annotation
2
DNA Topoisomerase 4 Subunit B
Molecule annotation
Nucleotides(4 molecules)
1
5'-d(*cp*ap*tp*gp*ap*ap*t)-3'
Molecule annotation
1
5'-d(p*ap*gp*tp*cp*ap*tp*tp*cp*ap*tp*g)-3'
Molecule annotation
1
5'-d(*cp*gp*tp*gp*cp*ap*t)-3'
Molecule annotation
1
5'-d(p*gp*ap*cp*tp*ap*tp*gp*cp*ap*cp*g)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
4
Magnesium IonMagnesium Ion
2
2
3-Amino-7-{(3r)-3-[(1s)-1-Aminoethyl]pyrrolidin-1-Yl}-1-Cyclopropyl-6-Fluoro-8-Methylquinazoline-2,4(1h,3h)-Dione3-Amino-7-{(3r)-3-[(1s)-1-Aminoethyl]pyrrolidin-1-Yl}-1-Cyclopropyl-6-Fluoro-8-Methylquinazoline-2,4(1h,3h)-Dione
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303