4AY2: Capturing 5' tri-phosphorylated RNA duplex by RIG-I

PDB ID: 4AY2Download
MMDB ID: 103501
PDB Deposition Date: 2012/6/17
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.8  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 4AY2: dimeric; determined by author and by software (PISA)
Molecular Components in 4AY2
Label Count Molecule
Protein (1 molecule)
1
Probable Atp-dependent RNA Helicase Ddx58
Molecule annotation
Nucleotide(1 molecule)
1
5'-r-ppp(gp*gp*cp*gp*cp*gp*gp*cp*up*up*cp*gp*gp*cp *cp*gp*cp*gp*cp*c)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
ZINC IONZINC ION
2
1
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
3
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303