4JQG: Crystal structure of an inactive mutant of MMP-9 catalytic domain in complex with a fluorogenic synthetic peptidic substrate with a fluorine atom

PDB ID: 4JQGDownload
MMDB ID: 168792
PDB Deposition Date: 2013/3/20
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.849  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 4JQG: dimeric; determined by author and by software (PISA)
Molecular Components in 4JQG
Label Count Molecule
Proteins (2 molecules)
1
Fluorogenic Peptidic Substrate (8mc)plg(pff)(dnw)ar(nh2)
Molecule annotation
1
Matrix Metalloproteinase-9
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
1
AZIDE IONAZIDE ION
2
2
ZINC IONZINC ION
3
2
CALCIUM IONCALCIUM ION
4
1
STRONTIUM IONSTRONTIUM ION
5
5
1,2-ETHANEDIOL1,2-ETHANEDIOL
6
1
GLYCEROLGLYCEROL
7
1
S-1,2-PROPANEDIOLS-1,2-PROPANEDIOL
8
1
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303