National Center for
Biotechnology Information

4PJ0: Structure of T.elongatus Photosystem II, rows of dimers crystal packing

PDB ID:

MMDB ID:

124955

PDB Deposition Date:

2014/5/10

Updated in MMDB:

2022/11

Experimental Method:

x-ray diffraction

Resolution:

2.437 Å

Source Organism:

Thermosynechococcus vestitus BP-1▼

Taxonomy	Molecule
Thermosynechococcus vestitus BP-1	A, C, D, E, F, H, I, J, K, L, M, O, T, U, V, Y, X, Z, a, c, d, e, f, h, i, j, k, l, m, o, t, u, v, x , R, r, y, z
Thermosynechococcus vestitus	B, b

Similar Structures:

Biological Unit for 4PJ0: 40-meric; determined by author and by software (PISA)

Molecular Components in 4PJ0
Label	Count	Molecule
Proteins (40 molecules)
A a	2	Photosystem Q(b) Protein 1
B b	2	Cp47 Protein
C c	2	Photosystem II Cp43 Protein
D d	2	Photosystem II D2 Protein
E e	2	Cytochrome B559 Subunit Alpha
F f	2	Cytochrome B559 Subunit Beta
H h	2	Photosystem II Reaction Center Protein H
I i	2	Photosystem II Reaction Center Protein I
J j	2	Photosystem II Reaction Center Protein J
K k	2	Photosystem II Reaction Center Protein K
L l	2	Photosystem II Reaction Center Protein L
M m	2	Photosystem II Reaction Center Protein M
O o	2	Photosystem II Manganese-stabilizing Polypeptide
T t	2	Photosystem II Reaction Center Protein T
U u	2	Photosystem II 12 KDA Extrinsic Protein
V v	2	Cytochrome C-550
Y y	2	Photosystem II Reaction Center Protein Ycf12
X x	2	Photosystem II Reaction Center X Protein
Z z	2	Photosystem II Reaction Center Protein Z
R r	2	Photosystem II Protein Y
Chemicals and Non-standard biopolymers (191 molecules)
1	2	CA-MN4-O5 CLUSTER
2	2	FE (III) ION
3	14	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
4	4	CHLORIDE ION
5	70	CHLOROPHYLL A
6	22	BETA-CAROTENE
7	4	2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE
8	6	1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
9	10	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
10	10	SULFATE ION
11	2	BICARBONATE ION
12	29	UNKNOWN LIGAND
13	8	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
14	4	PHEOPHYTIN A
15	2	PROTOPORPHYRIN IX CONTAINING FE
16	2	HEME C