4X15: JC Mad-1 polyomavirus VP1 in complex with GM2 oligosaccharide

PDB ID: 4X15Download
MMDB ID: 128761
PDB Deposition Date: 2014/11/24
Updated in MMDB: 2015/05
Experimental Method:
x-ray diffraction
Resolution: 2.11  Å
Source Organism:
Similar Structures:
Biological Unit for 4X15: pentameric; determined by author and by software (PISA)
Molecular Components in 4X15
Label Count Molecule
Proteins (5 molecules)
5
Major Capsid Protein VP1
(Gene symbol: Jvgp4)
Molecule annotation
Chemicals and Non-standard biopolymers (35 molecules)
1
3
beta-D-glucopyranosebeta-D-glucopyranose
2
3
beta-D-galactopyranosebeta-D-galactopyranose
3
3
N-acetyl-alpha-neuraminic acidN-acetyl-alpha-neuraminic acid
4
3
2-acetamido-2-deoxy-beta-D-galactopyranose2-acetamido-2-deoxy-beta-D-galactopyranose
5
7
GLYCEROLGLYCEROL
6
14
1,2-ETHANEDIOL1,2-ETHANEDIOL
7
2
POTASSIUM IONPOTASSIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303