5GAM: Foot region of the yeast spliceosomal U4/U6.U5 tri-snRNP

PDB ID: 5GAMDownload
MMDB ID: 136295
PDB Deposition Date: 2015/12/15
Updated in MMDB: 2022/11
Experimental Method:
electron microscopy
Resolution: 3.7  Å
Source Organism:
Similar Structures:
Biological Unit for 5GAM: dodecameric; determined by author and by software (PISA)
Molecular Components in 5GAM
Label Count Molecule
Proteins (10 molecules)
1
Pre-mrna-splicing Factor 8
(Gene symbol: PRP8)
Molecule annotation
1
Pre-mrna-splicing Factor Snu114
(Gene symbol: SNU114)
Molecule annotation
1
Small Nuclear Ribonucleoprotein-associated Protein B
(Gene symbol: SMB1)
Molecule annotation
1
Small Nuclear Ribonucleoprotein E
(Gene symbol: SME1)
Molecule annotation
1
Small Nuclear Ribonucleoprotein F
(Gene symbol: SMX3)
Molecule annotation
1
Small Nuclear Ribonucleoprotein G
(Gene symbol: SMX2)
Molecule annotation
1
Unknown Polypeptide
Molecule annotation
1
Small Nuclear Ribonucleoprotein SM D3
(Gene symbol: SMD3)
Molecule annotation
1
Small Nuclear Ribonucleoprotein SM D1
(Gene symbol: SMD1)
Molecule annotation
1
Small Nuclear Ribonucleoprotein SM D2
(Gene symbol: SMD2)
Molecule annotation
Nucleotides(2 molecules)
1
U5 Snrna
Molecule annotation
1
U6 Snrna, 5' END
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
GUANOSINE-5'-TRIPHOSPHATE (Link to PubChem not yet available)GUANOSINE-5'-TRIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303