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5GAP:
Body region of the U4/U6.U5 tri-snRNP
PDB ID:
5GAP
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MMDB ID:
136089
PDB Deposition Date:
2015/12/15
Updated in MMDB:
2022/11
Experimental Method:
electron microscopy
Resolution:
3.6 Å
Source Organism:
Saccharomyces cerevisiae
Similar Structures:
VAST+
Download sequence data
Molecular Components in 5GAP
Label
Count
Molecule
Proteins (9 molecules)
x
1
Unknown Protein
A
1
Pre-mrna-splicing Factor 8
(Gene symbol:
PRP8
)
H
1
U4/u6 Small Nuclear Ribonucleoprotein Prp4
(Gene symbol:
PRP4
)
J
1
Pre-mrna-splicing Factor 6
(Gene symbol:
PRP6
)
D
1
Spliceosomal Protein Dib1
(Gene symbol:
DIB1
)
F
1
Pre-mrna-processing Factor 31
(Gene symbol:
PRP31
)
G
1
U4/u6 Small Nuclear Ribonucleoprotein Prp3
(Gene symbol:
PRP3
)
K
1
13 KDA Ribonucleoprotein-associated Protein
(Gene symbol:
SNU13
)
B
1
Pre-mrna-splicing Helicase Brr2
(Gene symbol:
BRR2
)
Nucleotides(3 molecules)
V
1
U4 Snrna, 5' Region, Nucleotides 1-67
W
1
U6 Snrna
U
1
U5 Snrna
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303