5O5E: Crystal structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) (V264G mutant) in complex with tunicamycin

PDB ID: 5O5EDownload
MMDB ID: 159578
PDB Deposition Date: 2017/6/1
Updated in MMDB: 2019/11
Experimental Method:
x-ray diffraction
Resolution: 3.4  Å
Source Organism:
Similar Structures:
Biological Unit for 5O5E: dimeric; determined by software (PISA)
Molecular Components in 5O5E
Label Count Molecule
Proteins (2 molecules)
2
Udp-n-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
(Gene symbol: DPAGT1)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
(2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE(2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE
2
2
TunicamycinTunicamycin
3
2
UNKNOWN LIGANDUNKNOWN LIGAND
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303