6CW6: Structure of alpha-GC[8,18] bound by CD1d and in complex with the Va14Vb8.2 TCR

PDB ID: 6CW6Download
MMDB ID: 173799
PDB Deposition Date: 2018/3/29
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.85  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 6CW6: tetrameric; determined by author and by software (PISA)
Molecular Components in 6CW6
Label Count Molecule
Proteins (4 molecules)
1
Antigen-presenting Glycoprotein Cd1d1
Molecule annotation
1
Beta-2-microglobulin
Molecule annotation
1
Chimeric T Cell Antigen Receptor Alpha Chain
Molecule annotation
1
Chimeric T Cell Antigen Receptor Beta Chain Vb8.2
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
4
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
alpha-L-fucopyranosealpha-L-fucopyranose
3
1
(2S,3S,4R)-N-OCTANOYL-1-[(ALPHA-D-GALACTOPYRANOSYL)OXY]-2-AMINO-OCTADECANE-3,4-DIOL(2S,3S,4R)-N-OCTANOYL-1-[(ALPHA-D-GALACTOPYRANOSYL)OXY]-2-AMINO-OCTADECANE-3,4-DIOL
4
1
PALMITIC ACIDPALMITIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303