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6FTX:
Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosome
PDB ID:
6FTX
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MMDB ID:
165511
PDB Deposition Date:
2018/2/25
Updated in MMDB:
2018/10
Experimental Method:
electron microscopy
Resolution:
4.5 Å
Source Organism:
synthetic construct
▼
Taxonomy
Molecule
synthetic construct
I, J
Homo sapiens
N, O
Xenopus tropicalis
D, H
Xenopus laevis
B, C, E, F, G
Petromyzon marinus
A
Saccharomyces cerevisiae
W
Similar Structures:
VAST+
Download sequence data
Biological Unit for 6FTX: tridecameric; determined by software (PISA)
Molecular Components in 6FTX
Label
Count
Molecule
Proteins (11 molecules)
A
1
Histone H3
B
F
2
Histone H4
C
G
2
Histone H2A Type 1
D
H
2
Histone H2B
E
1
Histone H3.3c
N
O
2
Polyubiquitin-b
W
1
Chromatin-remodeling Atpase
Nucleotides(2 molecules)
I
1
DNA (159-mer)
J
1
DNA (160-mer)
Chemicals and Non-standard biopolymers (2 molecules)
1
1
BERYLLIUM TRIFLUORIDE ION
2
1
ADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303