6G18: Cryo-EM structure of a late human pre-40S ribosomal subunit - State C

PDB ID: 6G18Download
MMDB ID: 163045
PDB Deposition Date: 2018/3/20
Updated in MMDB: 2019/12
Experimental Method:
electron microscopy
Resolution: 3.6  Å
Source Organism:
Similar Structures:
Biological Unit for 6G18: 35-meric; determined by author and by software (PISA)
Molecular Components in 6G18
Label Count Molecule
Proteins (34 molecules)
1
40S Ribosomal Protein S5
(Gene symbol: RPS5)
Molecule annotation
1
40S Ribosomal Protein S12
(Gene symbol: RPS12)
Molecule annotation
1
40S Ribosomal Protein S15
(Gene symbol: RPS15)
Molecule annotation
1
40S Ribosomal Protein S16
(Gene symbol: RPS16)
Molecule annotation
1
40S Ribosomal Protein S17
(Gene symbol: RPS17)
Molecule annotation
1
40S Ribosomal Protein S18
(Gene symbol: RPS18)
Molecule annotation
1
40S Ribosomal Protein S19
(Gene symbol: RPS19)
Molecule annotation
1
40S Ribosomal Protein S25
(Gene symbol: RPS25)
Molecule annotation
1
40S Ribosomal Protein S28
(Gene symbol: RPS28)
Molecule annotation
1
Ubiquitin-40s Ribosomal Protein S27a
(Gene symbol: RPS27A)
Molecule annotation
1
Receptor of Activated Protein C Kinase 1
(Gene symbol: RACK1)
Molecule annotation
1
40S Ribosomal Protein SA
(Gene symbol: RPSA)
Molecule annotation
1
40S Ribosomal Protein S3A
(Gene symbol: RPS3A)
Molecule annotation
1
40S Ribosomal Protein S2
(Gene symbol: RPS2)
Molecule annotation
1
40S Ribosomal Protein S4, X Isoform
(Gene symbol: RPS4X)
Molecule annotation
1
40S Ribosomal Protein S6
(Gene symbol: RPS6)
Molecule annotation
1
40S Ribosomal Protein S7
(Gene symbol: RPS7)
Molecule annotation
1
40S Ribosomal Protein S8
(Gene symbol: RPS8)
Molecule annotation
1
40S Ribosomal Protein S9
(Gene symbol: RPS9)
Molecule annotation
1
40S Ribosomal Protein S11
(Gene symbol: RPS11)
Molecule annotation
1
40S Ribosomal Protein S13
(Gene symbol: RPS13)
Molecule annotation
1
40S Ribosomal Protein S14
(Gene symbol: RPS14)
Molecule annotation
1
40S Ribosomal Protein S21
(Gene symbol: RPS21)
Molecule annotation
1
40S Ribosomal Protein S15a
(Gene symbol: RPS15A)
Molecule annotation
1
40S Ribosomal Protein S23
(Gene symbol: RPS23)
Molecule annotation
1
40S Ribosomal Protein S24
(Gene symbol: RPS24)
Molecule annotation
1
40S Ribosomal Protein S27
(Gene symbol: RPS27)
Molecule annotation
1
40S Ribosomal Protein S30
(Gene symbol: FAU)
Molecule annotation
1
RNA-binding Protein Pno1
(Gene symbol: PNO1)
Molecule annotation
1
RNA-binding Protein Nob1
(Gene symbol: NOB1)
Molecule annotation
1
Pre-rrna-processing Protein Tsr1 Homolog
(Gene symbol: TSR1)
Molecule annotation
1
Bystin
(Gene symbol: BYSL)
Molecule annotation
1
Serine/threonine-protein Kinase Rio2
(Gene symbol: RIOK2)
Molecule annotation
1
Protein Ltv1 Homolog
(Gene symbol: LTV1)
Molecule annotation
Nucleotide(1 molecule)
1
Pre-18s Ribosomal RNA
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
ZINC ION (Link to PubChem not yet available)ZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303