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6PCM:
Crystal Structure of Mycobacterium smegmatis Topoisomerase I with ssDNA bound to both N- and C-terminal domains
PDB ID:
6PCM
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MMDB ID:
185661
PDB Deposition Date:
2019/6/17
Updated in MMDB:
2023/10
Experimental Method:
x-ray diffraction
Resolution:
3.107 Å
Source Organism:
Mycolicibacterium smegmatis MC2 155
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Taxonomy
Molecule
Mycolicibacterium smegmatis MC2 155
A, B
Mycolicibacterium smegmatis
C, D
Similar Structures:
VAST+
Download sequence data
Biological Unit for 6PCM: dimeric; determined by author and by software (PISA)
Molecular Components in 6PCM
Label
Count
Molecule
Protein (1 molecule)
A
1
DNA Topoisomerase 1
Nucleotide(1 molecule)
C
1
DNA (5'-d(p*ap*gp*tp*gp*ap*gp*cp*gp*ap*gp*cp*tp*tp*cp*cp*gp*cp*tp*tp*gp*ap*cp*tp*t)-3')
Chemicals and Non-standard biopolymers (12 molecules)
1
12
SULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303