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6PPB:
Kaposi's sarcoma-associated herpesvirus (KSHV), C5 portal vertex structure
PDB ID:
6PPB
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MMDB ID:
179351
PDB Deposition Date:
2019/7/6
Updated in MMDB:
2019/12
Experimental Method:
electron microscopy
Resolution:
4.3 Å
Source Organism:
Human herpesvirus 8 strain GK18
Similar Structures:
VAST+
Download sequence data
Molecular Components in 6PPB
Label
Count
Molecule
Proteins (19 molecules)
k
1
Capsid Vertex Component 1
l
m
2
Capsid Vertex Component 2
n
o
2
Large Tegument Protein Deneddylase
(Gene symbol:
ORF64
)
S
T
W
X
4
Major Capsid Protein
(Gene symbol:
ORF25
)
b
5
2
Triplex Capsid Protein 1
c
d
6
7
4
Triplex Capsid Protein 2
0
1
2
3
4
Small Capsomere-interacting Protein
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303