6VNQ: Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with Bishydroxamic Acid Based Inhibitor

PDB ID: 6VNQDownload
MMDB ID: 187590
PDB Deposition Date: 2020/1/29
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.05  Å
Source Organism:
Similar Structures:
Biological Unit for 6VNQ: monomeric; determined by author
Molecular Components in 6VNQ
Label Count Molecule
Protein (1 molecule)
1
Polyamine Deacetylase Hdac10
(Gene symbol: hdac10)
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
1
N-hydroxy-1-{[4-(hydroxycarbamoyl)phenyl]methyl}-1H-indole-6-carboxamideN-hydroxy-1-{[4-(hydroxycarbamoyl)phenyl]methyl}-1H-indole-6-carboxamide
2
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
1
ZINC IONZINC ION
4
2
POTASSIUM IONPOTASSIUM ION
5
2
PHOSPHATE IONPHOSPHATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303