7O81: Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot

PDB ID: 7O81Download
MMDB ID: 202772
PDB Deposition Date: 2021/4/14
Updated in MMDB: 2023/11
Experimental Method:
electron microscopy
Resolution: 3.1  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2
Similar Structures:
Biological Unit for 7O81: 87-meric; determined by author
Molecular Components in 7O81
Label Count Molecule
Proteins (80 molecules)
1
40S Ribosomal Protein S27
Molecule annotation
1
Ribosomal Protein S28
Molecule annotation
1
Ribosomal Protein S27a
Molecule annotation
1
40S Ribosomal Protein S30
Molecule annotation
1
Ribosomal Protein Es26
Molecule annotation
1
Rack1
Molecule annotation
1
Us14
Molecule annotation
1
Edf1
Molecule annotation
1
40S Ribosomal Protein SA
Molecule annotation
1
40S Ribosomal Protein S3A
Molecule annotation
1
Ribosomal Protein US5
Molecule annotation
1
40S Ribosomal Protein S3
Molecule annotation
1
Ribosomal Protein ES4
Molecule annotation
1
Ribosomal Protein S5
Molecule annotation
1
40S Ribosomal Protein S6
Molecule annotation
1
40S Ribosomal Protein S7
Molecule annotation
1
40S Ribosomal Protein S8
Molecule annotation
1
Ribosomal Protein S9 (Predicted)
Molecule annotation
1
Ribosomal Protein Es10
Molecule annotation
1
40S Ribosomal Protein S11
Molecule annotation
1
40S Ribosomal Protein S12
Molecule annotation
1
Us15
Molecule annotation
1
40S Ribosomal Protein Us11
Molecule annotation
1
40S Ribosomal Protein Us19
Molecule annotation
1
US9
Molecule annotation
1
40S Ribosomal Protein Es17
Molecule annotation
1
40S Ribosomal Protein S18
Molecule annotation
1
Ribosomal Protein Es19
Molecule annotation
1
40S Ribosomal Protein Us10
Molecule annotation
1
Ribosomal Protein Es21
Molecule annotation
1
Ribosomal Protein S15a
Molecule annotation
1
40S Ribosomal Protein S23
Molecule annotation
1
40S Ribosomal Protein S24
Molecule annotation
1
40S Ribosomal Protein S25
Molecule annotation
1
60S Ribosomal Protein L41
Molecule annotation
1
Ribosomal Protein UL2
Molecule annotation
1
Ribosomal Protein L3
Molecule annotation
1
60S Ribosomal Protein L4
Molecule annotation
1
Ribosomal_l18_c Domain-containing Protein
Molecule annotation
1
60S Ribosomal Protein L6
Molecule annotation
1
Ribosomal Protein Ul30
Molecule annotation
1
Ribosomal Protein EL8
Molecule annotation
1
60S Ribosomal Protein L9
Molecule annotation
1
60S Ribosomal Protein L10
Molecule annotation
1
Ribosomal Protein L11
Molecule annotation
1
Replicase Polyprotein 1AB
Molecule annotation
1
Ribosomal Protein El13
Molecule annotation
1
Ribosomal Protein L14
Molecule annotation
1
Ribosomal Protein L15
Molecule annotation
1
Ribosomal Protein L13a
Molecule annotation
1
Ul22
Molecule annotation
1
Ribosomal Protein L18
Molecule annotation
1
60S Ribosomal Protein L19
Molecule annotation
1
Ribosomal Protein L18a
Molecule annotation
1
El21
Molecule annotation
1
Ribosomal Protein El22
Molecule annotation
1
Ribosomal Protein L23
Molecule annotation
1
El24
Molecule annotation
1
Ul23
Molecule annotation
1
Ribosomal Protein L26
Molecule annotation
1
60S Ribosomal Protein L27
Molecule annotation
1
60S Ribosomal Protein L27a
Molecule annotation
1
60S Ribosomal Protein L29
Molecule annotation
1
El30
Molecule annotation
1
El31
Molecule annotation
1
El32
Molecule annotation
1
El33
Molecule annotation
1
60S Ribosomal Protein L34
Molecule annotation
1
Ul29
Molecule annotation
1
60S Ribosomal Protein L36
Molecule annotation
1
Ribosomal Protein L37
Molecule annotation
1
El38
Molecule annotation
1
El39
Molecule annotation
1
60S Ribosomal Protein L40
Molecule annotation
1
El42
Molecule annotation
1
El43
Molecule annotation
1
Ribosomal Protein El28
Molecule annotation
1
60S Acidic Ribosomal Protein P0
Molecule annotation
1
Ribosomal Protein L12
Molecule annotation
1
Ribosomal Protein UL1
Molecule annotation
Nucleotides(7 molecules)
1
18S rRNA
Molecule annotation
1
mRNA Containing Sars-cov-2 Sequence
Molecule annotation
1
A-site Met-trna(met)
Molecule annotation
1
P-site tRNA(pro)
Molecule annotation
1
28S rRNA
Molecule annotation
1
5S rRNA
Molecule annotation
1
5.8s rRNA
Molecule annotation
Chemicals and Non-standard biopolymers (624 molecules)
349
266
Molecule information is not available.
8
1
* Click molecule labels to explore molecular sequence information.

Citing MMDB