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Taxonomy browser (Nitrosopumilus maritimus SCM1)

Nitrosopumilus maritimus SCM1

Taxonomy ID: 436308 (for references in articles please use NCBI:txid436308)
current name
Nitrosopumilus maritimus SCM1
equivalent:
Nitrosopumilus maritimus str. SCM1
Nitrosopumilus maritimus strain SCM1
NCBI BLAST name: archaea
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Seattle Aquarium strain SCM1
Lineage( full )
cellular organisms; Archaea; TACK group; Nitrososphaerota; Nitrososphaeria; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus; Nitrosopumilus maritimus
   Entrez records   
Database name Direct links Links from type
Nucleotide 7 7
Protein 2,385 -
Structure 13 -
Genome 1 -
Popset 1 -
GEO Datasets 19 -
PubMed Central 31 -
Gene 2,055 -
SRA Experiments 14 -
Identical Protein Groups 2,193 -
BioProject 8 -
BioSample 13 12
Assembly 1 1
Taxonomy 1 -

Notes:

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Walker CB et al. (2010)
Walker, C.B., de la Torre, J.R., Klotz, M.G., Urakawa, H., Pinel, N., Arp, D.J., Brochier-Armanet, C., Chain, P.S., Chan, P.P., Gollabgir, A., Hemp, J., Hugler, M., Karr, E.A., Konneke, M., Shin, M., Lawton, T.J., Lowe, T., Martens-Habbena, W., Sayavedra-Soto, L.A., Lang, D., Sievert, S.M., Rosenzweig, A.C., Manning, G., and Stahl, D.A. "Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea." Proc. Natl. Acad. Sci. USA (2010) 107:8818-8823.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider organism-specific BioCyc
GOLD: Go0002333 organism-specific Genomes On Line Database
641228499: Nitrosopumilus maritimus SCM1 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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