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Taxonomy browser (Thermococcus kodakarensis KOD1)

Thermococcus kodakarensis KOD1

Taxonomy ID: 69014 (for references in articles please use NCBI:txid69014)
current name
Thermococcus kodakarensis KOD1
equivalent:
Thermococcus kodakarensis strain KOD1
NCBI BLAST name: euryarchaeotes
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Pyrococcus sp. (strain KOD1)
heterotypic synonym
Pyrococcus sp. KOD1
heterotypic synonym
Thermococcus kodakaraensis KOD1
equivalent:
Thermococcus kodakarensis str. KOD1
Lineage( full )
cellular organisms; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus kodakarensis
   Entrez records   
Database name Direct links Links from type
Nucleotide 141 44
Protein 5,921 -
Structure 156 -
Genome 1 -
Popset 3 -
Conserved Domains 2 -
GEO Datasets 13 -
PubMed Central 29 -
Gene 2,555 -
SRA Experiments 26 -
Identical Protein Groups 3,760 -
BioProject 7 -
BioSample 23 9
Assembly 1 1
Taxonomy 1 -

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Atomi H et al. (2004)
Atomi,H., Fukui, T., Kanai, T., Morikawa, M., and Imanaka, T. "Description of Thermococcus kodakaraensis sp. nov., a well studied hyperthermophilic archaeon previously reported as Pyrococcus sp. KOD1" Archaea (2004) 1:263-267. Published online 16 April 2004
Fujiwara S et al. (1998)
Fujiwara, S., Takagi, M., and Imanaka, T. " Archaeon Pyrococcus kodakaraensis KOD1: application and evolution." Biotechnol. Annu. Rev. (1998) 4:259-284.
Fukui T et al. (unpublished_2005)
Fukui, T., Kanai, T., Atomi, H., Fujiwara, S., and Imanaka, T. "Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Unpublished (as of 1 February 2005)
Morikawa M et al. (1994)
Morikawa, M., Izawa, Y., Rashid, N., Hoaki, T., and Imanaka, T. "Purification and characterization of a thermostable thiol protease from a newly isolated hyperthermophilic Pyrococcus sp." Appl. Environ. Microbiol. (1994) 60:4559-4566.
Tang XF et al. (2000)
Tang, X.F., Ezaki, S., Atomi, H., and Imanaka, T. "Biochemical analysis of a thermostable tryptophan synthase from a hyperthermophilic archaeon." Eur. J. Biochem. (2000) 267:6369-6377.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider organism-specific BioCyc
2 records from this provider organism-specific Genomes On Line Database
638154520: Thermococcus kodakarensis KOD1 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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