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Taxonomy browser (Campylobacterota)

Campylobacterota 1)

Taxonomy ID: 29547 (for references in articles please use NCBI:txid29547)
current name
Campylobacterota Waite et al. 2021 in [Oren A & Garrity GM (2021)]
homotypic synonym:
"Epsilonbacteraeota" Waite et al. 2017, effective name 2) in [Waite DW et al. (2017)]
"Campylobacterota" Waite et al. 2018, effective name 3) in [Waite DW et al. (2018)]
NCBI BLAST name: e-proteobacteria
Rank: phylum
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Proteobacteria epsilon subdivision
heterotypic synonym
Purple bacteria, epsilon subdivision
heterotypic synonym
epsilon proteobacteria
heterotypic synonym
epsilon subdivision
heterotypic synonym
epsilon subgroup
blast name
e-proteobacteria
Lineage( full )
cellular organisms; Bacteria
   Entrez records   
Database name Subtree links Direct links
Nucleotide 1,353,593 -
Protein 13,263,476 -
Structure 1,207 -
Genome 256 -
Popset 1,424 589
Conserved Domains 187 73
GEO Datasets 3,736 -
PubMed Central 94,066 1,597
Gene 346,675 -
SRA Experiments 143,019 22
GEO Profiles 16,128 -
Protein Clusters 16,799 -
Identical Protein Groups 10,373,151 -
BioProject 3,580 4
BioSample 161,723 21
Assembly 124,378 -
Genetic Testing Registry 2 -
PubChem BioAssay 1,243 -
Taxonomy 4,165 1

Notes:

Comments and References:

Oren A & Garrity GM (2021), PubMed: abstract
Oren, A., and Garrity, G.M. "Valid publication of the names of forty-two phyla of prokaryotes." Int. J. Syst. Evol. Microbiol. (2021) 71(10):005056.
Waite DW et al. (2017), doi: 10.3389/fmicb.2017.00682, PubMed: abstract
Waite, D.W., Vanwonterghem, I., Rinke, C., Parks, D.H., Zhang, Y., Takai, K., Sievert, S.M., Simon, J., Campbell, B.J., Hanson, T.E., Woyke, T., Klotz, M.G., and Hugenholtz, P. "Comparative genomic analysis of the class Epsilonproteobacteria and proposed reclassification to Epsilonbacteraeota (phyl. nov.)." Front. Microbiol. (2017) 8:682. [Erratum: Addendum: Front. Microbiol. (2018) 9:772.]
Waite DW et al. (2018), doi: 10.3389/fmicb.2018.00772, PubMed: abstract
Waite, D.W., Vanwonterghem, I., Rinke, C., Parks, D.H., Zhang, Y., Takai, K., Sievert, S.M., Simon, J., Campbell, B.J., Hanson, T.E., Woyke, T., Klotz, M.G., and Hugenholtz, P. "Erratum: Addendum: Comparative genomic analysis of the class Epsilonproteobacteria and proposed reclassification to Epsilonbacteraeota (phyl. nov.)." Front. Microbiol. (2018) 9:772.
Waite DW et al. (2017)
Waite, D.W., Vanwonterghem, I., Rinke, C., Parks, D.H., Zhang, Y., Takai, K., Sievert, S.M., Simon, J., Campbell, B.J., Hanson, T.E., Woyke, T., Klotz, M.G., and Hugenholtz, P. "Comparative genomic analysis of the class Epsilonproteobacteria and proposed reclassification to Epsilonbacteraeota (phyl. nov.)." Front. Microbiol. (2017) 8:682. [Erratum: Front. Microbiol. (2018) 9:772.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Epsilonproteobacteria taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Integrated Microbial Genomes
Epsilonproteobacteria taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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