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Taxonomy browser (Caenorhabditis elegans)

Caenorhabditis elegans

Taxonomy ID: 6239 (for references in articles please use NCBI:txid6239)
current name
Caenorhabditis elegans (Maupas, 1900)
homotypic synonym:
Rhabditis elegans Maupas, 1900
NCBI BLAST name: nematodes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 5 (Invertebrate Mitochondrial)
Other names:
common name(s) roundworm
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
   Entrez records   
Database name Direct links
Nucleotide 475,216
Protein 69,166
Structure 409
Genome 1
Popset 39
Conserved Domains 22
GEO Datasets 23,684
PubMed Central 59,177
Gene 50,987
HomoloGene 4,291
SRA Experiments 34,924
GEO Profiles 795,897
Protein Clusters 12
Identical Protein Groups 31,959
Bio Project 1,691
Bio Sample 33,117
Bio Systems 1,308
Assembly 30
Probe 186,754
PubChem BioAssay 468
Taxonomy 1

Genome Information

See the NCBI Genome homepage
Go to NCBI genomic BLAST page for Caenorhabditis elegans

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Caenorhabditis elegans taxonomy/phylogenetic Animal Diversity Web
DNA barcoding : Caenorhabditis elegans taxonomy/phylogenetic Barcodes of Life
6 records from this provider supplemental materials Dryad Digital Repository
Caenorhabditis elegans taxonomy/phylogenetic Encyclopedia of life
8 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
639507900: Caenorhabditis elegans Bristol N2 organism-specific Integrated Microbial Genomes
Caenorhabditis elegans taxonomy/phylogenetic Integrated Taxonomic Information System
Caenorhabditis elegans taxonomy/phylogenetic Lifemap
5 records from this provider taxonomy/phylogenetic NCBI taxonomy bookmarks
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Sanger companies/research institutes The Sanger Centre
Caenorhabditis elegans taxonomy/phylogenetic TreeBase
WebScipio: Caenorhabditis elegans organism-specific WebScipio - eukaryotic gene identification
2 records from this provider taxonomy/phylogenetic World Register of Marine Species
2 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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