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Taxonomy browser (Streptomyces umbrinus)

Streptomyces umbrinus

Taxonomy ID: 67370 (for references in articles please use NCBI:txid67370)
current name
Streptomyces umbrinus (Sveshnikova 1957) Pridham et al. 1958 (Approved Lists 1980) (Sveshnikova 1957) Pridham et al. 1958 in [Skerman VBD et al. (1980)]
type strain of Streptomyces umbrinus (Sveshnikova 1957) Pridham et al. 1958 (Approved Lists 1980): ATCC:19929, ATCC:25503, CBS:645.69, DSM:40278, IFO:13091, NBRC:13091, INA:1703/53, JCM:4521, NRRL:B-2572, NRRL-ISP:5278, RIA:1283, VKM:Ac:1747, ISP:5278
homotypic synonym:
"Actinomyces umbrinus" Sveshnikova in Gauze et al. 1957, effective name 1)
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Streptomyces ederensis Wallhausser et al. 1966 (Approved Lists 1980) Wallhausser et al. 1966 in [Skerman VBD et al. (1980)]
type strain of Streptomyces ederensis Wallhausser et al. 1966 (Approved Lists 1980): CGMCC:4.1665, ATCC:15304, CBS:545.70, BCRC:11896, CECT:3212, DSM:40741, IFO:15410, NBRC:15410, JCM:4958, KCTC:9726, NRRL:B-8146, VKM:Ac:845
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces phaeochromogenes group
   Entrez records   
Database name Direct links Links from type
Nucleotide 432 156
Protein 44,628 -
Genome 1 -
Popset 28 -
PubMed Central 12 -
SRA Experiments 2 -
Identical Protein Groups 33,648 -
BioProject 5 -
BioSample 8 5
Assembly 5 -
Taxonomy 1 -

Notes:

Comments and References:
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Pridham RG et al. (1958), other link:https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/pmc/articles/PMC1057356/
Pridham, R.G., Hesseltine, C.W., and Benedict, R.G. "A guide for the classification of streptomycetes according to selected groups: placement of strains in morphological sections." Appl. Microbiol. (1958) 6(1):52-79. [No abstract available.]
Shirling EB & Gottlieb D (1969)
Shirling, E.B., and Gottlieb, D. "Cooperative description of type cultures of Streptomyces. IV. Species descriptions from the second, third and fourth studies." Int. J. Syst. Bacteriol. (1969) 19:391-512. [No PubMed record available.]
Ritacco FV & Eveleigh DE (2008), doi:10.1007/s10295-008-0367-0
Ritacco, F.V., and Eveleigh, D.E. "Molecular and phenotypic comparison of phaeochromycin-producing strains of Streptomyces phaeochromogenes and Streptomyces ederensis." J. Ind. Microbiol. Biotechnol. (2008) 35(9):931-945.
Saygin H (2021), doi:10.1099/ijsem.0.004797
Saygin, H. "Genomic insight into the Streptomyces aurantiacus clade: reclassification of Streptomyces ederensis as a later heterotypic synonym of Streptomyces umbrinus and Streptomyces glomeroaurantiacus as a later heterotypic synonym of Streptomyces aurantiacus." Int. J. Syst. Evol. Microbiol. (2021) 71(5):004797.
Wallhausser KH et al. (1966)
Wallhausser, K.H., Nesemann, G., Prave, P., and Steigler, A. "Moenomycin, a new antibiotic. I. Fermentation and isolation." Antimicrob. Agents Chemother. (1966) 1965:734-736. [No abstract available]
Gauze GF et al. (1957)
Gauze, G.F., Preobrazhenskaya, T.P., Kudrina, E.S., Blinov, N.O., Ryabova, I.D., and Sveshnikova, M.A. "Problems of classification of actinomycetes-antagonists." Government Publishing House of Medical Literature, Medgiz, Moscow 1957, pp. 1-398. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Streptomyces umbrinus meta-databases BacDive
2 records from this provider organism-specific BioCyc
Streptomyces umbrinus (Sveshnikova 1957) Pridham et al. 1958 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
Streptomyces umbrinus culture/stock collections Global Catalogue of Microorganisms
2 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

Organism modifiers

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strain
12C [1 1] 166 [1] 17 [1] 173286 [1 1]
173521 [1 1] 173841 [1 1] 174483 [1 1] 60 [1]
8374 [1 1] AN_R33 [1] AN_eE2 [1] B2G2 [1 1]
BCCO 10_1523 [2 2 1] BCCO 10_231 [2 2 1] BCCO 10_393 [2 2 1] BCCO 10_413 [1 1]
BCCO 10_458 [2 2 1] BCCO 10_607 [2 2 1] BCCO 10_628 [2 2 1] BCCO 10_637 [2 2 1]
BCCO 10_639 [2 2 1] BCCO 10_75 [2 2 1] BCCO 10_77 [2 2 1] BGS2 [1]
BGZ2 [1] BHS1 [1] BHZ1 [1] CECT 3212 [1 1 38]
CEMTC_5702 [1] CNS129 [1] EG1 [1] EHZ2 [1]
F2S18 [1 1] F7-2 [1 1] HBUM173245 [1 1] HHS2 [1]
HHZ2 [1] I-A-E-26 [1 1] IIIM57 [1 1] ISE_21 [1 1]
JCM 4521 [1 146 10503] JCM 4958 [1 129 9312] JZY1-50 [1] K219 [1 1]
K253 [1 1] K416 [1 1] KCTC 9726 [1 1] MT_SA_6_I_27F.27F [1]
NBRC 13091 [1 3 1] NBRC 15410 [1 3 1] NRRL B-24732 [1 1 1] NRRL B-2572 [6 4 5]
NRRL B-2572T [1] NRRL B-8146 [9 7 7] P4F120 [1] P4F2 [1]
P4P39 [1] P4P64 [1] P5M33 [1] P5O35 [1]
PmtD [1 1] QT189-2 [1] R2-177 [1 1] REN17 strain REN17 [1 1 215] of Streptomyces sp. REN17
S 9-1 [1 1] SCZ22A [1] SCZ23A [1] SCZ39 [1]
SCZ41 [1] SIIB_Cu_E1 [1 1] SK 1.25 [1] SR 82 [1]
ST13 [1] V2I4 [1 1 5] WB26 [1] WB39 [1]
WB44 [1] WB45 [1] WB46 [1] WB47 [1]
WB5 [1] WB55 [1] WB6 [1] WLY106 [1]
WLY113 [1] WT27 [1] WT9 [1] YR-41 [1 1]
ZHY230 [1] cfcc3157 [1 1] sMM44 [1 1] strain SZN165 [1]
isolate
BD18-B15 [1] CSSP688 [1 1]
culture-collection
JCM:4521 [145 10503] JCM:4958 [128 9312]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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