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Taxonomy browser (Bordetella pertussis)

Bordetella pertussis

Taxonomy ID: 520 (for references in articles please use NCBI:txid520)
Scientific name: Bordetella pertussis (Bergey et al. 1923) Moreno-Lopez 1952
type strain of Bordetella pertussis: ATCC:9797
type strain of Bordetella pertussis: CCUG:30873
type strain of Bordetella pertussis: CIP:63.1
type strain of Bordetella pertussis: DSM:5571
type strain of Bordetella pertussis: BCCM/LMG:14455
type strain of Bordetella pertussis: NCTC:10739
homotypic synonym: "Hemophilus pertussis" Bergey et al. 1923, effective name 1)
homotypic synonym: "Haemophilus pertussis" (Bergey et al. 1923) Pribram 1933, effective name 1)
Inherited blast name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
synonym: "Microbe de la coqueluche" Bordet and Gengou 1906
synonym: "Bacterium tussis-convulsivae" Lehmann and Neumann 1927, effective name 1)
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella
   Entrez records   
Database name Subtree links Direct links
Nucleotide 406,336 394,648
Protein 2,758,535 2,607,193
Structure 52 27
Genome 1 1
Popset 16 16
Conserved Domains 3 3
GEO Datasets 176 152
PubMed Central 6,581 6,581
Gene 11,538 47
SRA Experiments 2,256 2,173
Protein Clusters 2,110 2,110
Identical Protein Groups 75,437 68,435
Bio Project 111 61
Bio Sample 2,767 2,601
Bio Systems 1,058 -
Assembly 798 724
Probe 74 66
PubChem BioAssay 27 27
Taxonomy 49 1

Notes:

Comments and References:

Bergey DH et al. (1923)
Bergey, D.H., Harrison, F.C., Breed, R.S., Hammer B.W., and Huntoon, F.M. Bergey's Manual of Determinative Bacteriology, 1st ed. (1923) The Williams and Wilkins Co., Baltimore, pp. 1-442. [No PubMed record available.]

Bordet J & Gengou O (1906)
Bordet, J., and Gengou, O. "Le microbe de la coqueluche." Ann. Inst. Pasteur (Paris) (1906) 20:731-741. [No PubMed record available.]

Reference to PubMed documentKhattak MN & Matthews RC (1993)
Khattak, M.N., and Matthews, R.C. "Genetic relatedness of Bordetella species as determined by macrorestriction digests resolved by pulsed-field gel electrophoresis." Int. J. Syst. Bacteriol. (1993) 43:659-664.

Lehmann KB & Neumann R (1927)
Lehmann, K.B., and Neumann, R. Bakteriologie insbesondere Bakteriologische Diagnostik. II. Allgmeine und spezielle Bakteriologie 7 Aufl. (1927) J.F. Lehmann, Munchen. [No PubMed record available.]

Moreno-Lopez M (1952)
Moreno-Lopez, M. "El genero Bordetella [The genus Bordetella]." Microbiologia Espanola (1952) 5:177-181. [No PubMed record available.]

Pribram E (1933)
Pribram, E.: Klassification der Schizomyceten. F. Deuticke, Leipzig, (1933) pp. 1-143. [No PubMed record available.]

Nota BeneSkerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]


Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
PRIMERWALK WGS ALL
SC - The Sanger Center
206 1,961 2,167
Totals per type
206 1,961 2,167

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bordetella pertussis meta-databases BacDive
19 records from this provider organism-specific BioCyc
Bordetella pertussis (Bergey et al. 1923) Moreno-LA%B3pez 1952 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
7 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Bordetella pertussis culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
78 records from this provider organism-specific Integrated Microbial Genomes
Bordetella pertussis (taxon passport) culture/stock collections StrainInfo
Sanger companies/research institutes The Sanger Centre
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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