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Taxonomy browser (Bos taurus)

Bos taurus

Taxonomy ID: 9913 (for references in articles please use NCBI:txid9913)
Scientific name: Bos taurus Linnaeus, 1758
homotypic synonym: Bos primigenius taurus
includes: Bovidae sp. Adi Nefas
Genbank common name: cattle
Inherited blast name: even-toed ungulates
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
synonym: Bos bovis
common name: bovine
common name: cow
common name: dairy cow
common name: domestic cattle
common name: domestic cow
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
   Entrez records   
Database name Direct links
Nucleotide 1,390,025
Nucleotide EST 172,186
Nucleotide GSS 477,228
Protein 127,936
Structure 2,805
Genome 1
Popset 462
Conserved Domains 2
GEO Datasets 15,108
UniGene 45,364
PubMed Central 6,901
Gene 117,895
HomoloGene 17,529
SRA Experiments 18,023
GEO Profiles 211,919
Protein Clusters 12
Identical Protein Groups 69,533
Bio Project 1,053
Bio Sample 34,806
Bio Systems 2,003
Assembly 13
Clone DB 367,199
Probe 115,470
PubChem BioAssay 5,935
Taxonomy 1

Genome Information

See the NCBI Genome homepage
Go to NCBI genomic BLAST page for Bos taurus
Genome view: 31 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 X Y
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
CLONEEND EST FINISHING PCR PRIMERWALK SHOTGUN WGS ALL
BARC - USDA, ARS, Beltsville Agricultural Research Center
25,454 81,913 - - - - - 107,367
BCCAGSC - British Columbia Cancer Agency Genome Sciences Centre
125,597 527,017 - - - - - 652,614
BCM - Baylor College of Medicine
16,892 - - - - 11,043,692 24,863,627 35,924,211
CENARGEN - Embrapa Genetic Resources and Biotechnology
16,787 - - - - - 26,246 43,033
GSC - Genoscope
53,556 - - - - - - 53,556
JCVI - J. Craig Venter Institute
10,651 - - - - - - 10,651
MARC - USDA, ARS, US Meat Animal Research Center
- 207,204 - 171,667 - - - 378,871
NISC - NIH Intramural Sequencing Center
- - - - - 844,844 - 844,844
SC - The Sanger Center
- 18,623 - 781 1,039 1,578 655 22,676
TIGR - The Institute for Genome Research
65,171 - - - - - - 65,171
UIACBCB - University of Iowa Center for Bioinformatics and Computation Biology (UIACBCB)
- 2,485 - - - - - 2,485
UIUC - University of Illinois at Urbana-Champaign
106,368 - - - - - - 106,368
UOKNOR - University of Oklahoma Norman Campus, Advanced Center for Genome Technology
- - 151 - - 15,150 - 15,301
WUGSC - Washington University, Genome Sequencing Center
49 - - - - - - 49
Totals per type
420,525 837,242 151 172,448 1,039 11,905,264 24,890,528 38,227,197

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bos taurus taxonomy/phylogenetic Animal Diversity Web
2 records from this provider taxonomy/phylogenetic AnimalBase
Bos taurus taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Bos taurus taxonomy/phylogenetic Barcodes of Life
Bos taurus taxonomy/phylogenetic CalPhotos
6 records from this provider supplemental materials Dryad Digital Repository
Bos primigenius taurus taxonomy/phylogenetic Encyclopedia of life
6 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Bos taurus Linnaeus, 1758 taxonomy/phylogenetic Integrated Taxonomic Information System
Bos taurus taxonomy/phylogenetic Lifemap
Bos taurus Linnaeus 1758 taxonomy/phylogenetic Mammal Species of the World
cow (genome proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Bos taurus taxonomy/phylogenetic TreeBase
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
WebScipio: Bos taurus organism-specific WebScipio - eukaryotic gene identification
diArk: Bos taurus organism-specific diArk - a resource for eukaryotic genome research
Breeds of Livestock (Oklahoma State) taxdemo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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