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Taxonomy browser (Cavia porcellus)

Cavia porcellus

Taxonomy ID: 10141 (for references in articles please use NCBI:txid10141)
current name
Cavia porcellus
basionym:
Mus porcellus Linnaeus, 1758
homotypic synonym:
Cavia aperea porcellus
Genbank common name: domestic guinea pig
NCBI BLAST name: rodents
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
heterotypic synonym
Cavia cobaya
common name(s) guinea pig
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
   Entrez records   
Database name Direct links
Nucleotide 119,485
Protein 78,580
Structure 35
Genome 1
Popset 56
GEO Datasets 1,097
PubMed Central 2,005
Gene 44,984
SRA Experiments 1,987
Protein Clusters 1
Identical Protein Groups 58,488
BioProject 76
BioSample 1,096
Assembly 2
PubChem BioAssay 14,020
Taxonomy 1

Comments and References:

image:Cavia porcellus

Genome Information

Go to NCBI genomic BLAST page for Cavia porcellus

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Cavia porcellus taxonomy/phylogenetic Animal Diversity Web
2 records from this provider taxonomy/phylogenetic AnimalBase
2 records from this provider taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Cavia porcellus taxonomy/phylogenetic Barcodes of Life
4 records from this provider supplemental materials Dryad Digital Repository
Cavia porcellus (Linnaeus, 1758) taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0006476 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Cavia porcellus (Linnaeus, 1758) taxonomy/phylogenetic Integrated Taxonomic Information System
Cavia porcellus Linnaeus 1758 taxonomy/phylogenetic Mammal Species of the World
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Cavia porcellus taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
2 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
051 [2 1 79435 62057] 2 [16 27 15 12 16] 2/NCR [1 1] ATCC CRL-1405 [1 1]
Abyssinian [2 2] Crl:(BFA) BR [4 5] Crl:(BFA)BR [4 5] Duncan Hartley [6 6]
Duncan-Hartley [6 6] Duncan-Hartley, male [1 1] Dunkin Hartley [24 52 18 33] Dunkin-Harley [1 1]
Dunkin-Hartley [24 52 18 33] Dunkon-Hartley [1 1] Durukim Hartley [1 1] ENVIGO, Dunkin Hartley stock, HsdDhl:DH [1 1]
English short hair [1 1] English short-haired [1 1] HSD:WIN [1 1] Hartley [1 96 85 14529 1 14436 97]
Hartley IMVS [2 2] Hartley albino [4 4] Hartley albinos [2 2] Hartley white [5 5]
Hertley [1 1] HsdDhl:DH [238 240 1 1 238] JM109 [2 3] JY-1 [3 4]
N/A [26 26] NIH 2 [2 2] NIH inbred strain 2 [3 3] NIH strain [1 1]
NIH strain 2 [6 6] Pirbright white [2 2] SHD [1 13] Sahlins [1 1]
Sasco Hartley albino [3 3] Slc:Hartley [1 1] Std:Hartley [1 1] Z [1 2]
breed Hartley [1 1] inbred line 2N [1 3144] pirbridge white [3 3] strain 13/N [1 1]
strain 2 [2 2]
isolate
#4989 [1 1] #4989F [1 1] 001 [1 1 1] 002 [1 1 1]
003 [1 1 1] 004 [1 1 1] 005 [1 1 1] 006 [1 1 1]
007 [1 1 1] 008 [1 1 1] 009 [1 1 1] 109_1_HC [1 1]
109_1_LC [1 1] 109_2_HC [1 1] 109_2_LC [1 1] 109_3_HC [1 1]
109_3_LC [1 1] 109_4_HC [1 1] 109_4_LC [1 1] 109_5_HC [1 1]
109_5_LC [1 1] 112_10_HC [1 1] 112_10_LC [1 1] 112_11_HC [1 1]
112_11_LC [1 1] 112_12_HC [1 1] 112_12_LC [1 1] 112_13_HC [1 1]
112_13_LC [1 1] 112_14_HC [1 1] 112_14_LC [1 1] 112_15_HC [1 1]
112_15_LC [1 1] 112_16_HC [1 1] 112_16_LC [1 1] 112_17_HC [1 1]
112_17_LC [1 1] 112_18_HC [1 1] 112_18_LC [1 1] 112_19_HC [1 1]
112_19_LC [1 1] 112_1_HC [1 1] 112_1_LC [1 1] 112_20_HC [1 1]
112_20_LC [1 1] 112_21_HC [1 1] 112_21_LC [1 1] 112_22_HC [1 1]
112_22_LC [1 1] 112_23_HC [1 1] 112_23_LC [1 1] 112_24_HC [1 1]
112_24_LC [1 1] 112_25_HC [1 1] 112_25_LC [1 1] 112_2_HC [1 1]
112_2_LC [1 1] 112_3_HC [1 1] 112_3_LC [1 1] 112_4_HC [1 1]
112_4_LC [1 1] 112_5_HC [1 1] 112_5_LC [1 1] 112_6_HC [1 1]
112_6_LC [1 1] 112_7_HC [1 1] 112_7_LC [1 1] 112_8_HC [1 1]
112_8_LC [1 1] 112_9_HC [1 1] 112_9_LC [1 1] 26-Cpo [1 1]
29-Cpo [1 1] 35-Cpo [1 1] A [3 2 2] A-003 [1 1 1]
A-005 [1 1 1] ABTC85660 [1 1 1] B [3 2] B-008 [1 1]
B-009 [1 1] BotanaMA30 [1 1 1] BotanaMA32 [1 1 1] BotanaMA33 [1 1 1]
BotanaMA35 [1 1 1] BotanaMA36 [1 1 1] BotanaMA38 [1 1 1] BotanaME31 [1 1 1]
BotanaME34 [1 1 1] BotanaME37 [1 1 1] BotanaME39 [1 1 1] BotanaME40 [1 1 1]
BotanaME41 [1 1 1] C [1 1] CMH5 [1 1] CPSCN5A [1 1]
CPSCN5A1 [1 1] CTL1 [1 1] CTL5 [1 1] Cig [1]
D [1 1] E [1 1] H1893 [3 3 1] Jose_M_HernandezME42 [1 1 1]
Jose_M_HernandezME43 [1 1 1] Jose_M_HernandezME44 [1 1 1] Jose_M_HernandezME45 [1 1 1] MB-23 [1 1]
ObonucoME15 [1 1 1] ObonucoME16 [1 1 1] ObonucoME17 [1 1 1] ObonucoME18 [1 1 1]
PCI 7 [1 1] PalLab524CR [1 79435 62057] PastoME46 [1 1 1] PastoME47 [1 1 1]
PastoME49 [1 1 1] PotosiCR12 [1 1 1] PotosiME10 [1 1 1] PotosiME11 [1 1 1]
PotosiME14 [1 1 1] PotosiME9 [1 1 1] PupialesCR5 [1 1 1] PupialesMA3 [1 1 1]
PupialesMA51 [1 1 1] PupialesMA52 [1 1 1] PupialesME4 [1 1 1] PupialesME6 [1 1 1]
SFA4 [1 1] T-6107 [3 3] UFA1 [1 1] UFA2 [1 1]
UdenarCR25 [1 1 1] UdenarCR26 [1 1 1] UdenarCR27 [1 1 1] UdenarME19 [1 1 1]
UdenarME20 [1 1 1] UdenarME22 [1 1 1] UdenarME23 [1 1 1] UdenarME24 [1 1 1]
WT-85 [1 1] tumorigenic cell line [3 1] tumorigenic cell line 107C3 [3 2]
sub-species
Durukim Hartley breed Durukim Hartley [1 1] Hartley White breed Hartley White [1 1]
specimen-voucher
Broad Sequencing Sample 289.1 [1 1] Broad:Sequencing.Sample:289.1, Broad Institute, Cambridge, MA [3143] CP [2 2 2] LCM 2307b [1 1]
LCM 2308b [1 1 1] LCM 2347 [1 1] LCM 2461 [1 1] LCM 2463, Arica Agro [1 1]
LCM1845 [1 1] LCM2308 [1 1] LCM2347 [1 1 1] LCM2410 [1 1]
LCM2412 [1 1] LCM2414 [1 1] LCM2416 [1 1] LCM2441 [1 1]
LCM2497 [1 1] LCM2498 [1 1] LCM2548 [1 1] LCM3266 [1 1 1]
LCM3267 [1 1 1] LCM3288 [1 1 1] LCM3289 [1 1 1] LCM3290 [1 1 1]
LCM3292 [1 1 1] LCMD3133 [1 1 1] LCMd2463 [1 1 1] LCMd3144 [1 1 1]
LCMd3244 [1 1 1] LCMd3311 [1 1 1] NK116550 [1 1 1] T2147 [3 3 1]
breed
Abyssinian [1 2] Amerindian Talabre [1 1] Andina Arica [3 1 3] Dunkin Hartley [2 1 79439 62061]
Dunkin-Hartley [2 1 79439 62061] Durukim Hartley [1 1] Hartley [66 63 3 3 96] Hartley White [1 1]
Mejocuy Auqui [2 1 2] Mejocuy Nativa [2 1 2] Mejocuy Tamborada [2 1 2] Pirbright [1 1 1]
city market [3 3] creoleJunin [1 1 1] house breed [1 1] market Arequipa [1 1]
market breed [1 1] popular market Cusco [1 1] popular market Puno [1 1] tricolor [4 4]
culture-collection
ATCC:CRL-1405 [2 2]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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