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Taxonomy browser (Human alphaherpesvirus 1)

Human alphaherpesvirus 1 1)

Taxonomy ID: 10298 (for references in articles please use NCBI:txid10298)
current name
Human alphaherpesvirus 1, ICTV accepted 1)
acronym:
HSV-1
HSV1
equivalent:
Human herpesvirus type 1
herpes simplex virus 1 HSV-1
herpes simplex virus HSV-1
herpes simplex virus type 1 HSV-1
herpes simplex virus type 1 HSV1
herpes simplex virus type-1 HSV-1
Genbank common name: Herpes simplex virus type 1
NCBI BLAST name: viruses
Rank: species
Genetic code: Translation table 1 (Standard)
Host: human|vertebrates
Other names:
heterotypic genbank synonym
Herpes simplex virus 1
heterotypic synonym
Human herpesvirus 1
Lineage( full )
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus
   Entrez records   
Database name Subtree links Direct links
Nucleotide 9,373 9,349
Protein 30,273 29,446
Structure 106 36
Genome 1 1
Popset 84 84
GEO Datasets 547 502
PubMed Central 4,311 4,311
Gene 128 128
SRA Experiments 884 817
Protein Clusters 77 77
Identical Protein Groups 7,809 7,571
Bio Project 59 51
Bio Sample 563 499
Assembly 19 13
Probe 53 53
PubChem BioAssay 1,974 1,742
Taxonomy 18 1

Notes:

View and Analyze sequences in NCBI Virus
ICTV homepage

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Human herpesvirus 1 taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0084758 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
638276208: Human herpesvirus 1 organism-specific Integrated Microbial Genomes
Human alphaherpesvirus 1 taxonomy/phylogenetic International Committee on Taxonomy of Viruses
2 records from provider dna/protein sequence VirOligo Compilation Lab
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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