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Taxonomy browser (Pseudalkalibacillus berkeleyi)

Pseudalkalibacillus berkeleyi

Taxonomy ID: 1069813 (for references in articles please use NCBI:txid1069813)
current name
Pseudalkalibacillus berkeleyi (Nedashkovskaya et al. 2012) Joshi et al. 2022 in [Validation List No. 203 (2022)]
homotypic synonym:
"Pseudalkalibacillus berkeleyi" (Nedashkovskaya et al. 2012) Joshi et al. 2021, effective name 1) in [Joshi A et al. (2021)]
basionym:
Bacillus berkeleyi Nedashkovskaya et al. 2012 in [Validation List No. 145 (2012)]
type strain of Bacillus berkeleyi: KCTC:12718, KMM:6244, BCCM/LMG:26357
homotypic synonym:
Alkalihalobacillus berkeleyi (Nedashkovskaya et al. 2012) Patel and Gupta 2020 in [Patel S & Gupta RS (2020)]
includes:
Bacillus sp. KMM 6244
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Bacillales; Bacillaceae; Pseudalkalibacillus
   Entrez records   
Database name Direct links Links from type
Nucleotide 53 12
Protein 3,549 -
Genome 1 -
Popset 6 -
PubMed Central 2 -
Identical Protein Groups 3,659 -
BioProject 2 -
BioSample 1 1
Assembly 1 1
Taxonomy 1 -

Notes:

Comments and References:
Validation List No. 203 (2022), PubMed: abstract
Validation List No. 203. "Valid publication of new names and new combinations effectively published outside the IJSEM. Validation List no. 203." Int. J. Syst. Evol. Microbiol. (2022) 72(1):005167.
Joshi A et al. (2021), doi: 10.3389/fmicb.2021.722369, PubMed: abstract
Joshi, A., Thite, S., Karodi, P., Joseph, N., and Lodha, T. "Alkalihalobacterium elongatum gen. nov. sp. nov.: An antibiotic-producing bacterium isolated from Lonar Lake and reclassification of the genus Alkalihalobacillus into seven novel genera." Front. Microbiol. (2021) 12:722369.
Validation List No. 145 (2012)
Validation List No. 145: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2012) 62:1017-1019.
Patel S & Gupta RS (2020), PubMed: abstract
Patel S, Gupta RS. "A phylogenomic and comparative genomic framework for resolving the polyphyly of the genus Bacillus: Proposal for six new genera of Bacillus species, Peribacillus gen. nov., Cytobacillus gen. nov., Mesobacillus gen. nov., Neobacillus gen. nov., Metabacillus gen. nov. and Alkalihalobacillus gen. nov." Int. J. Syst. Evol. Microbiol. (2020) 70(1):406-438.
Nedashkovskaya OI et al. (2012)
Nedashkovskaya, O.I., Van Trappen, S., Frolova, G.M., and De Vos, P. "Bacillus berkeleyi sp. nov., isolated from the sea urchin Strongylocentrotus intermedius." Arch. Microbiol. (2012) 194:215-221.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
8072553267: Bacillus berkeleyi KCTC 12718 organism-specific Integrated Microbial Genomes
Bacillus berkeleyi taxonomy/phylogenetic Lifemap
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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