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Taxonomy browser (Nitrospira japonica)

Nitrospira japonica

Taxonomy ID: 1325564 (for references in articles please use NCBI:txid1325564)
current name
"Nitrospira japonica" Ushiki et al. 2013, effective name 1)
type strain of "Nitrospira japonica": personal::J1
Nitrospira sp. NJ1
NCBI BLAST name: bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( abbreviated )
Bacteria; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae; Nitrospira
   Entrez records   
Database name Direct links Links from type
Nucleotide 7 2
Protein 7,833 -
Genome 1 -
PubMed Central 30 -
SRA Experiments 14 -
Identical Protein Groups 4,739 -
BioProject 5 -
BioSample 18 -
Assembly 4 -
Taxonomy 1 -


Comments and References:

Ushiki N et al. (2013)
Ushiki, N., Fujitani, H., Aoi, Y., and Tsuneda, S. "Isolation of Nitrospira belonging to sublineage II from a wastewater treatment plant." Microbes Environ. (2013) 28:346-353.
Ushiki N et al. (2018)
Ushiki, N., Fujitani, H., Shimada, Y., Morohoshi, T., Sekiguchi, Y., and Tsuneda, S. "Genomic analysis of two phylogenetically distinct Nitrospira species reveals their genomic plasticity and functional diversity." Front. Microbiol. (2018) 8:2637.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: Go0396124 organism-specific Genomes On Line Database
2757321055: Nitrospira japonica NJ11 organism-specific Integrated Microbial Genomes
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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