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Taxonomy browser (Niallia circulans)

Niallia circulans

Taxonomy ID: 1397 (for references in articles please use NCBI:txid1397)
current name
Niallia circulans (Jordan 1890) Gupta et al. 2020 in [Gupta RS et al. (2020)]
basionym:
Bacillus circulans Jordan 1890 (Approved Lists 1980) Jordan 1890, nom. approb. 1)
type strain of Bacillus circulans Jordan 1890 (Approved Lists 1980): ATCC:24, ATCC:4513, ATCC:9140, BCRC:10605, CCM:2048, CCUG:7416, CIP:52.75, DSM:11, HAMBI:1911, IAM:12462, IFO:13626, JCM:2504, BCCM/LMG:13261, BCCM/LMG:6926, NBRC:13626, NCCB:75011, NCDO:1775, NCIMB:9374, NCTC:2610, NRRL:B-378, NRRL:B-380, VKM:B-1242
includes:
Bacillus sp. 3399BRRJ
Bacillus sp. NCIM 2107
Bacillus sp. NCIM 5045
Bacillus sp. NCIM 5046
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Bacillales; Bacillaceae; Niallia
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 4,933 4,796 169
Protein 109,684 109,646 -
Structure 94 91 -
Genome 1 1 -
Popset 141 141 -
Conserved Domains 1 1 -
GEO Datasets 8 8 -
PubMed Central 12 12 -
Gene 10,274 5,160 -
SRA Experiments 41 41 -
Protein Clusters 1 1 -
Identical Protein Groups 61,012 61,006 -
BioProject 29 28 -
BioSample 70 69 3
Assembly 27 26 1
PubChem BioAssay 4 4 -
Taxonomy 4 1 -

Notes:

Comments and References:
Gupta RS et al. (2020), PubMed: abstract
Gupta, R.S., Patel, S., Saini, N., and Chen, S. "Robust demarcation of 17 distinct Bacillus species clades, proposed as novel Bacillaceae genera, by phylogenomics and comparative genomic analyses: description of Robertmurraya kyonggiensis sp. nov. and proposal for an emended genus Bacillus limiting it only to the members of the Subtilis and Cereus clades of species." Int. J. Syst. Evol. Microbiol. (2020) 70(11):5753-5798.
Jordan EO (1890)
Jordan, E.O. "A report on certain species of bacteria observed in sewage." In: W.T. Sedgewick (ed.), A Report of the Biological Work of the Lawrence Experiment Station, Including an Account of Methods Employed and Results Obtained in the Microscopical and Bacteriological Investigation of Sewage and Water. Report on Water Supply and Sewerage (Part II). The Report of theMassachusetts Board of Health (1890). pp. 821-844. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bacillus circulans meta-databases BacDive
4 records from this provider organism-specific BioCyc
Bacillus circulans Jordan 1890 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD Multi-Isolate Organism: Go0139492 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Bacillus circulans culture/stock collections Global Catalogue of Microorganisms
14 records from this provider organism-specific Integrated Microbial Genomes
Bacillus circulans taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Bacillus circulans taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
05 [1 1] 080702F1 [1] 1-77 [1] 105 [1 1]
1057 [1] 12RS3 [1] 1419 [1] 14a103 [1]
150 [1] 16_uB_II [1] 177a3 [1 2] 18.1 KSS [1]
19 [1 1 1] 1910ICU214 [1] 194Fe [1 1] 197Zn [1 1]
199Cu [2 2] 201 (P8) [1 1] 202PP [1 1] 225S_3FAAAER [1]
249 (P67Fs(B)) [1 1] 251 [1 27 24] 3082O2 [1 1] 3094O2 [1 1]
3243 [1 1 1] 3399BRRJ [1 1] 431CL [1 1] 4G7 [1]
51.7 [1] 5R.fA [1] 5S5 [1 1] 62-4 [1]
633.12.1 [1 1] 63_6a [1] 693/13 [1] 69_1a [1]
7506 [1 534 4700] 7520-T [1 246 4668] 7521-2 [1 362 4773] 7524 [1 236 4656]
7CCIP2 [1] 7CCIP2_Nondiabetic [1 1] A-2-9B-AP [1] A11 [1 3]
A2-2f [1] A233 [1] A75 [1] A8 [1 1]
A85a/R-67654 [1] A9 [1] AB1 [1] AB2 [1 1]
ACCC 10228 [1 1] ADMT 6 [1] AH-56 [1] AHG15 [1]
AHTR33 [1] AIMST S1 [1] AK-15 [1 1] AK1 [1]
AM7 [1 4] AMI-1 [1] AMJ102 [1] AMJ243 [1 1]
AMJ245 [1 1] AMJ250 [1 1] APBSWPTB119 [1 1] AR1 [1 1]
ARENTL-NU82 [1] ASU11 [1] ATCC 13403 [1 1] ATCC 21367 [1 1]
ATCC 21557 [1 16] ATCC 21558 [2 44] ATCC 21783 [2 4] ATCC 31382 [3 3]
ATCC 31805 [1 1 17] ATCC 4513 strain ATCC 4513 [8 1 1] of Niallia circulans subsp. circulans ATCC 4513; BGSC 16A1 [1] ATCC 4513; NCTC 2610; NCDO1775 [2]
ATCC 9500 [2 1 1] ATCC21367 [1 1] ATCC4513 strain ATCC 4513 [8 1 1] of Niallia circulans subsp. circulans AZ-5 [1 1]
An880 [1 264 1] Av-Sw.03 [1] Aymi [1] B-29 [1 1]
B-380 [1 43 1] B-393 [1 47 1] B088F [1 1] B089F [1 1]
B10CC [1] B147/16 [1] B19 [2] B230 [1 1]
B288 [1 1] B2S [1 1] B331F [1 1] B340F [1 1]
B341F [1 1] B3BP [1] B514-7a [1 1] B53_13 [1]
B72_11 [1] B81_11 [1] B863/17 [1] B865/17 [1]
B915/17 [1] B93 [1 1] BAB-2835 [1 1] BAB-7033 [1]
BAB-7034 [1] BAB-7040 [1] BAB-7046 [1] BAB-7049 [1]
BAB-7054 [1] BAB-7064 [1] BAB1568_u15 [1 1] BB-2 [1]
BB-24 [1] BBCC2568 [1] BBL02 [1] BC1 [1]
BECL10 [1 1] BFL1 [1 1] BIM B-2009 [1] BMC3N13 [1 1]
BNW17 [1 1] BP-13 [1] BP9_5B [1 1] BPAP5 [1]
BPB8 [1] BPDS8 [1] BS7 [1] BSH11 [1 1]
BS_T [1 1] BUR16B1 [1 1] BXG129 [1] BacNep [1 1]
Blood Culture SE/21/320305 B10952 [1] C-2 [1 1] C1-5-9 [1] C15 [2 1]
C2 ecto 3 [1] C2-37c-4 [1 1] C3-31 [1] C65 [1]
CAIM 245 [1 1] CB-31 [1] CB49 [1 1] CBD0118 strain CBD 118 [10 9] of Bacillus sp. CBD 118
CBD118 strain CBD 118 [10 9] of Bacillus sp. CBD 118 CC CN82 [1] CEMTC_2116 [1] CEMTC_3292 [1]
CFR-11 [1] CG109 [1] CK65 [1] CL-10 [1]
CMUP1 [1 1] CMb [1] CN82 [1] COPE108 [1 1]
CPB S58 [1] CRN 24 [1 536] CRN 25 [1 451] CS22 [1]
CT16 [1] CTFL4 [1] CU:ASL: TJ6 [1] CW2(2) [1 1]
CZ7 [1] CaR-3 [1] Catla M26 [1] Co-1 [1]
D1 [2 2] D145 [1] DC10 [2 2 180] DCL_26_MTCC_13483 [1]
DES208 [1] DES501 [1] DES601 [1] DF 9R [1 1]
DG90 [1] DIP-23 [1] DJK23 [1 1] DMF-4 [1 1]
DMcd1-1 [1] DS32 [1] DSMII [1 1] DURCK 25 [1]
DZ100 [2 1] EB249 [1 1] EB63 [1 1] EGK1 [1 1]
EGK10 [1 1] EGK4 [1 1] EGK5 [1 1] EGK6 [1 1]
EGK9 [1 1] EGY11 [1 1] EKM-jaros4 [1 1] ES-8c1 [1]
ES6T [1] EXB-L-1279 [1 1] EpV10 [1] FB7 [1]
FD35 [1 1] FDAARGOS_343 [1 12 5162 4] FDAARGOS_783 [1 2 4849 2] FJAT-29041 [1 1]
FJAT-44512 [1 1] FJAT-44625 [1 1] FJAT-44690 [1 1] FJAT-45131 [1 1]
FJAT-54669 [1] FORCN123 [1] FORCN133 [1] FORCN140 [1]
FORCN141 [1] FORCN142 [1] FORCN143 [1] FORCN144 [1]
FORCN146 [1] Fck-2-33 [1] G1-4-80 [1] G2 [2 1 3]
G20 [2 1 2] G2W4(B) [1 1] G5C_25m_M_09 [1 1] G9 [1 1]
G9C_69m_M_09 [1 1] GASx6 [1 1] GAU9 [1] GB7-HD1 [1]
GIDC-1aR [1 1] GN03 [1 4 4965 1] GXNNSY20210827 [1] Gvt-BLB-10 [1]
H13 [1] H14 [1] H170 [1 1] H76 [1]
HAmf48 [1] HBUAS52562 [1] HBUAS52563 [1] HMF2507 [1]
HN-13 [1] HNL23 [1] HPC673 [1 1] HQ-1-92 [1 1]
HQB924 [1 1] HQB938 [1 1] HQB946 [1 1] HQB947 [1 1]
HRh14 [1] HSC-23 [1] HT-200 [1] HX-5 [1]
I1 [1 1] IAM1165 [1 1] IAM12462 [2] IARI-AN23 [1 1]
IARI-THD-32 [1 1] ICM1 [1] IFO 13626 [1] IHB B 8016 [1 1]
IIIM-153 [1 1] IIL-Asp32 [1 1] IITKGPPSL-1 [1] INCT-LEITE_9 [1 1]
IN_525 [1] IN_730 [1] J1-1-1 [1 1] J24 [1]
J29 [1 1] J30 [1 1] JH-42 [1] JJ665 [1 291]
JPR82 [1 1] JSC_SF51 [1 1] JWJ-4 [1] JYCB1614 [1]
JYCB250 [1] JYCB381 [1] Jz12 [1 1] K-7D [1]
K7 [1 1] KAR81 [1 1] KB-9 [1] KK [1]
KL_1 [1] KL_2 [1] KL_4 [1] KL_I [1]
KL_II [1] KL_IV [1] KL_R11 [1] KL_R12 [1]
KL_R13 [1] KL_R15 [1] KL_R16 [1] KL_R21 [1]
KL_R22 [1] KOTS4C_M_40m_07 [1 1] KOTS4C_M_40m_08 [1 1] KS858 [1]
KSC 657 [1 81] KSPH7 [1] KSR-03 [1] Koi carp M13 [1]
Koi carp T16 [1] KsT202 [1 1] L018 [1] L2 [5 1 11]
L2C9L [1] L6 [1 1] L7 [1 1] LA396 [1 1]
LABA [1] LB191 [1 1] LB2 [1] LBT4B1 [1]
LD25_A6 [1] LD25_C1 [1] LD25_C6 [1] LD25_F10 [1]
LD25_G1 [1] LD25_H4 [1] LD30_A1 [1] LD30_A11 [1]
LD30_A12 [1] LD30_A3 [1] LD30_A4 [1] LD30_C4 [1]
LD30_C8 [1] LD30_D1 [1] LD30_E10 [1] LD30_E11 [1]
LD30_E2 [1] LD30_F1 [1] LD30_F11 [1] LD30_F2 [1]
LD30_G3 [1] LD30_H11 [1] LD30_H4 [1] LD30_H6 [1]
LD30_H8 [1] LIPOA/UEL_06 [1 1] LMA102 [1 1] LMA154 [1 1]
LMA155 [1 1] LMA54 [1 1] LMA58 [1 1] LNT4 [1]
LWQ5 [1] LZLJ002 [1 1] M [1] M1/42 [1 1]
M203 [1] MAPKH_28 [1] MBCC40075 [1 1] MBCC40100 [1 1]
MBF14 [1] MCI2554 [1 1] MD1 [1] ME77 [1]
MER_TA_165 [1 1] MER_TA_168 [1 1] MF2 [1] MFC_3C [1]
MG95 [1] MGB2012 [1 1] MH-K1 [1 2] MKPTK-8 [1]
MLU-UBKV-JP7-2 [2] MLU-UBKV-PP27-2 [2] MR-I19 [1 1] MRWBDR_1 [1]
MSB 429 [1] MSU1410 [1] MTCC 7906 [1 1] MTCC 8983 [1]
MZ-11 [1] Marseille-P655 [1] Med01-S2c [1 1] MehA-P38 [1]
Miral [1] MoAm12 [1] Mrigal M16 [1] Mrigal T26 [1]
Mu-Sa1 [1] N3 [13 1 1] N3A [1 1] N6 [1 2]
NBGD58 [1 1] NBRC 13626 [1 2 123] NBRC 13627 [1 1] NBRC 13628 [1 1]
NBRC 13629 [1 1] NBRC 13634 [1 2] NBRC 13640 [1 1] NBY8 [1 1]
NCDO 1775 [2] NCIB 11033 [1 1] NCIM 2107 [2 1] NCIM 5045 [1]
NCIM 5046 [1] NCIM5048 [1 1] NCT929 [1] NCTC2610 [1 29 9350 1]
NG114 [1] NH53P2 [1 1] NHB-1 [1 1] NIOT_V86 [1]
NITRR/R16 [1] NPP1 [1 1] NPVM indore [1] NR-681 [1 46]
NRRL B3312 [1 3] NRS-41 [1 76 1] NRS-728 [1 106 1] NRS-831 [1 69 1]
NSH18 [1 1] NT6.7 [1 1] Nc_PM3 [1] No. 4.1 [1 1]
OA6 [1] OCC17 [1 1] ODB14 [1 1] OF-GM51 [1 1]
OG097 [1] OG100 [1] OG112 [1] OG118 [1]
OH3087 [1 1] OKM104 [1] OL2 [1] OMACO-01 [1]
OS12 [1 1] OS4B [1] OSR32 [1 1] OSR36 [1 1]
OSS 25 [1 1] OsEnb_PLM_L14 [1] P 23 [1] P1 [1 1 1]
P508 [1] P6 [2] P6-27 [1] PAARW072 [1]
PAE6 [1 1] PAM11B [1] PASAU161 [1 1] PASKW131 [1 1]
PASKW132 [1 1] PF107X [1] PF2-12.5.2 [1 1] PF5-1.4 [1 1]
PF5-1.5 [1 1] PF63Q [1] PF7-1.3.1 [1 1] PF9-10.4.3 [1 1]
PJS4 [1 1] PK3-109 [1 3 1 4694] PK3-138 [1 3 1 4839] PK3-15 [1 3 1 4706]
PK3-45 [1 1] PK3-56 [1 1] PK3_109 [1 3 1 4694] PK3_138 [1 3 1 4839]
PK3_15 [1 3 1 4706] POG12_2 [1] PPMR-Pap-EB12 [1 1] PPMR-Pap-EB20 [1 1]
PRRZ2 [1 1] PSB 5 [1] PSB N2_1 [1] PSB56 [1]
PSB5Y [1] PSSG6 [1] PUL PTK1 [1] Ph_04A6.1 [1 1]
Platy T25 [1] Q11 [1] R1 [1 1 3 1] R3 [1]
RAE1 [1] RAE12 [1] RAE2 [1] RBT02 [1]
RD_MOSAA_08 [1 1] REN39N [1] RERA28 [1] RH-YJ10_15-86 [1]
RIGLD BC1 [1] RIT379 [1 208 4950] RJ18 [1 1] RJB-4 [1]
RJB-5 [1] RKP-12 [1] RKP-16 [1] RKP-19 [1]
RKP-20 [1] RK_G5 [1] RK_T8 [1] RR1a [1]
RR1c [1] RR1h [1] RSA2 [1] Rohu M14 [1]
S1 [3 3] S4A1 [1 1] S6 [1 1] SA43 [1]
SB024 [1 1] SB044 [1 1] SC2 [1] SD 16 [1]
SD3 [1] SD9 [1] SDF0007 [1 1] SHC 3 [1 1]
SJ4 [1] SK 3.23 [1] SKTU1 [1 1] SLBEEC1 [1]
SM2 [1] SML13 [1 1] SMPGMb14 [1 1] SP-G1 [1]
SP1 [1 1] SPTT7 [1] SS13 [1] SS5 [1 1]
SSF_16 [1] STB01 [1 1] STM53 [1] SY10-15 [1]
Sailfin molly M11 [1] Sal5 [1] Sco-D25 [1] Sichuan-D [1]
Sn25-040808 [1] T-1 [1] T27 [1 2] T54 [1 1]
T8 [1 2] TAG1 [1] TBS078 [1] TB_STinf4_BC1 [1]
TB_STinf5_BC1 [1] TC7 [1] TJ-1-12 [1 1] TJ-1-31 [1 1]
TM19 [1] TM20 [1] TN-31 [1 1] TN31 [1 1]
TPMC13 [1 1] TPR05 [1] TR20 [1] TSTRW7 [1 1]
TTK-006 [1 1] Tex01-S2c [1 1] Tex01-S3c [1 1] Tex03-P3c [1 1]
Ti-S3 [1] U-155 [1 2] U109 [1] UB3PA_RCPE17_1_a_13_OU_AL_1 [1]
USC24 [1] USTRW18 [1 1] V10 [1] V1016 [1]
V1273 [1] V3374 [1] V42.16 [1 1] V52.14 [1 1]
V7-54 [1] V905 [1] VNPL24 [1 1] VOM18 [1]
VR0709 [15 8] W 1526 [1 1] W1 [2] W1_907-R [1]
W239 [1 1] W47 [1] WC_41 [3 3 3] WG11E [1 1]
WG2E [1 1] WG60E [1 1] WL-12 [4 8] WL13 [1]
WMB5 [1] WRA-1 [1 1] WRB-10 [1 1] WRB-11 [1 1]
WS29 [1] WSBC20030 [1] WSBC20059 [1] WSBC20060 [1]
WSBC20061 [1] WZ-12 [1 1] WZ12 [1] X027 [1]
X3 [1] XA3 [1] XAAS.x135 [1] XD-K-2 [1]
XFCS28 [1] XH058 [1 1] XH34 [1] XJ12 [1]
XL27 [1] XP171 [1] Y5C2 [1] YC151 [1]
YC152 [1] YC154 [1] YC155 [1] YC156 [1]
YH182 [1] YH184 [1] YRNF1 [1] YS153 [1]
YS1710 [1] YS178 [1] YS196 [1] YZGR16 [3]
Yunan-C [1] ZN-AT-D3-19 [1] bubt10 [1] cifa_chp11 [3 2]
f35 [1] hhe44 [1] hhe83 [1] kisrepa127 [1]
kp1 [1] p102_E04 [1 1] p102_G06 [1 1] p13_H07 [1 1]
p14_F09 [1 1] p17_D10 [1 1] p17_D11 [1 1] p20_G05 [1 1]
p28_E04 [1 1] p31_B05 [1 1] p47_G03 [1 1] p51_G06 [1 1]
p53_B02 [1 1] p67_B03 [1 1] p82_H07 [1 1] p85_F10 [1 1]
p89_C12 [1 1] sh33BAB1876 [1 1]
serovar
not available: to be reported later [1 29 9350]
isolate
0112ALTP15,11 [1] 13 [1 1] 196 [1 1] 30 [1 1]
43/23 [1] B [3 1] BRL02-64 [1 1] C16 [1]
C18 [1] C20 [1] C24 [1] C48_C100_R2A [1]
G1 [2 4] HR105 [1] HR110 [1] HR113 [1]
HR92 [1] HR96 [1] J30TS3 [1] NH8 [1]
Otu395 [1] P23 5c1 [1] RF1 [1] SB1 [1 1]
SS36439bin_9 [1 100] T-3040 [1 1] Y203 [1 1]
nat-host
Camel [2] Homo sapiens [3] Sargassum sp. [1] Sus scrofa [1]
cotton [1]
sub-species
circulans Niallia circulans subsp. circulans
specimen-voucher
AFB004 [1 1] GPTB0132 [1] HirtLab PAKISTAN2015 PK3-109 [1 1] HirtLab PAKISTAN2015 PK3-138 [1 1]
HirtLab PAKISTAN2015 PK3-15 [1 1] HirtLab PAKISTAN2015 PK3-45 [1 1] HirtLab PAKISTAN2015 PK3-56 [1 1]
culture-collection
ATCC:13403 [1 1] ATCC:21558 [2 44] ATCC:290101 [1 1] ATCC:31382 [1 1]
ATCC:31805 [1 17] ATCC:4513 [4] ATCC:9500 [1 1 1] BEI<USA>:NR-681 [1 46]
BIM<BLR>:B-2009 [1] DSM:11T [1 1] FDA:FDAARGOS_343 [1 12 5162 4] FDA:FDAARGOS_783 [1 2 4849 2]
MTCC:7942 [1] NBRC:13626 [1 122] NBRC:13627 [1 1] NBRC:13628 [1 1]
NBRC:13629 [1 1] NBRC:13634 [1 2] NBRC:13640 [1 1] NCIM:2160 [1 1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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