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Taxonomy browser (Oryza sativa aromatic subgroup)

Oryza sativa aromatic subgroup

Taxonomy ID: 1736658 (for references in articles please use NCBI:txid1736658)
current name
Oryza sativa aromatic subgroup
NCBI BLAST name: monocots
Rank: no rank
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Oryza sativa Aromatic Japonica Group
heterotypic synonym
Oryza sativa Group V
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa Japonica Group
   Entrez records   
Database name Direct links
Nucleotide 56
Protein 112
Genome 1
Popset 13
SRA Experiments 9
Identical Protein Groups 85
BioProject 1
BioSample 1
Assembly 1

Comments and References:

The 3,000 rice genomes project
The 3,000 rice genomes project. GigaScience 2014, 3:7. DOI: http://dx.doi.org10.1186/2047-217X-3-7
Huang X et al. 2012, doi:10.1038/nature11532
Huang X et al. 2012. A map of rice genome variation reveals the origin of cultivated rice. Nature 490: 497-501. doi: http://0-dx-doi-org.brum.beds.ac.uk/10.1038/nature11532
Zhao K et al. 2010, doi:10.1371/journal.pone.0010780
Zhao K, Wright M, Kimball J, Eizenga G, McClung A, Kovach M, Tyagi W, Ali M, Tung C, Reynolds A, Bustamante C, SR McCouch. 2010. Genomic diversity and introgression in O. sativa reveal the impact of domestication and breeding on the rice genome. PLoS One 24:e10780. Published online 2010 May 24. DOI: http://0-dx-doi-org.brum.beds.ac.uk/10.1371/journal.pone.0010780
Sweeney M & McCouch S 2007, other link:http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/pmc/articles/PMC2759204/?tool=pubmed
Sweeney M and McCouch S. 2007. The complex history of the domestication of rice. Annals of Botany 100(5): 951-957.
Garris et al. 2005, other link:http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/pmc/articles/PMC1449546/?tool=pubmed
Garris AJ, Tai TH, Coburn J, Kresovich S, McCouch S. 2005. Genetic structure and diversity in Oryza sativa L. Genetics. 2005 Mar;169(3):1631-8. Epub 2005 Jan 16.
Kovach MJ et al. 2009, other link:http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/pmc/articles/PMC2732888/?tool=pubmed
Kovach MJ, Calingacion MN, Fitzgerald MA, McCouch SR. 2009. The origin and evolution of fragrance in rice (Oryza sativa L.). Proceedings of the National Academy of Sciences U.S.A. 106(34): 14444-9.

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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