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Taxonomy browser (Francisella opportunistica)

Francisella opportunistica

Taxonomy ID: 2016517 (for references in articles please use NCBI:txid2016517)
current name
Francisella opportunistica Dietrich et al. 1) in [Dietrich EA et al. (2019)]
type strain of Francisella opportunistica: personal::PA05-1188, DSM:107100, ATCC:BAA-2974, personal::PA051188
homotypic synonym:
"Francisella opportunistica" Challacombe et al. 2017, effective name
includes:
Francisella sp. 14-2155
Francisella sp. MA06-7296
Francisella sp. PA05-1188
Francisella sp. PA051188
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella
   Entrez records   
Database name Direct links Links from type
Nucleotide 9 4
Protein 5,404 -
Genome 1 -
PubMed Central 7 -
Identical Protein Groups 1,901 -
BioProject 1 -
BioSample 3 -
Assembly 3 1
Taxonomy 1 -

Notes:

Comments and References:
Dietrich EA et al. (2019), PubMed: abstract
Dietrich, E.A., Kingry, L.C., Kugeler, K.J., Levy, C., Yaglom, H., Young, J.W., Mead, P.S., and Petersen, J.M. "Francisella opportunistica sp. nov., isolated from human blood and cerebrospinal fluid." Int. J. Syst. Evol. Microbiol. (in press)
Challacombe JF et al. (2017)
Challacombe, J.F., Petersen, J.M., Gallegos-Graves, V., Hodge, D., Pillai, S., and Kuske, C.R. "Whole-genome relationships among Francisella bacteria of diverse origins define new species and provide specific regions for detection." Appl. Environ. Microbiol. (2017) 83(3):e02589-16. [Erratum: Appl. Environ. Microbiol. (2017) 83(6):e00174-17. (PMID 28254876)]
Kugeler KJ et al. (2008)
Kugeler, K.J., Mead, P.S., McGowan, K.L., Burnham, J.M., Hogarty, M.D., Ruchelli, E., Pollard, K., Husband, B., Conley, C., Rivera, T., Kelesidis, T., Lee, W.M., Mabey, W., Winchell, J.M., Stang, H.L., Staples, J.E., Chalcraft, L.J., and Petersen, J.M. "Isolation and characterization of a novel Francisella sp. from human cerebrospinal fluid and blood." J. Clin. Microbiol. (2008) 46(7):2428-2431.

External Information Resources (NCBI LinkOut)

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2 records from this provider organism-specific BioCyc
3 records from provider organism-specific Integrated Microbial Genomes
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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