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Taxonomy browser (Thermoproteota)

Thermoproteota

Taxonomy ID: 28889 (for references in articles please use NCBI:txid28889)
current name
Thermoproteota corrig. Garrity and Holt 2021 in [Oren A & Garrity GM (2021)]
homotypic synonym:
"Crenarchaeota" Garrity and Holt 2002 1) in [Validation List No. 85 (2002)]
homotypic synonym:
"Crenarchaeota" Woese et al. 1990, effective name
"Thermoproteaeota" Oren et al. 2015, effective name in [Oren A et al. (2015)]
"Thermoproteota" Whitman et al. 2018, effective name 2) in [Whitman WB et al. (2018)]
equivalent:
Crenarchaeota
NCBI BLAST name: crenarchaeotes
Rank: phylum
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Eocyta
heterotypic synonym
Thermoproteaeota
common name(s) eocytes
blast name
crenarchaeotes
Lineage( full )
cellular organisms; Archaea; TACK group
   Entrez records   
Database name Subtree links Direct links
Nucleotide 79,425 18
Protein 777,726 -
Structure 1,417 -
Genome 146 -
Popset 726 333
Conserved Domains 155 2
GEO Datasets 787 -
PubMed Central 11,783 3,514
Gene 308,492 -
SRA Experiments 1,590 -
Protein Clusters 8,886 -
Identical Protein Groups 896,662 -
BioProject 525 -
BioSample 3,959 -
Assembly 1,267 -
PubChem BioAssay 9 -
Taxonomy 1,271 1

Notes:

Comments and References:

Oren A & Garrity GM (2021), PubMed: abstract
Oren, A., and Garrity, G.M. "Valid publication of the names of forty-two phyla of prokaryotes." Int. J. Syst. Evol. Microbiol. (2021) 71(10):005056.
Validation List No. 85 (2002), PubMed: abstract
VALIDATION LIST No. 85. Int. J. Syst. Evol. Microbiol. (2002) 52(3):685-690. [No abstract available.]
Oren A et al. (2015), PubMed: abstract
Oren, A., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rosselló-Móra, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Whitman, W.B. "Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes." Int. J. Syst. Evol. Microbiol. (2015) 65(11):4284-4287.
Whitman WB et al. (2018), PubMed: abstract
Whitman, W.B., Oren, A., Chuvochina, M., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rossello-Mora, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Ventura, S. "Proposal of the suffix -ota to denote phyla. Addendum to 'Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes'." Int. J. Syst. Evol. Microbiol. (2018) 68(3):967-969.
Burggraf S et al. (1997b)
Burggraf, S., Huber, H., and Stetter, K.O. "Reclassification of the crenarchael orders and families in accordance with 16S rRNA sequence data." Int. J. Syst. Bacteriol. (1997) 47:657-660.
Cavalier-Smith T (2002)
Cavalier-Smith, T. "The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification." Int. J. Syst. Evol. Microbiol. (2002) 52(1):7-76.
Garrity GM & Holt JG (2001b)
Garrity, G.M., and Holt, J.G. "Phylum AI. Crenarchaeota phy. nov." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (D.R. Boone and R.W. Castenholz, eds.), Springer-Verlag, New York (2001). p. 169. [No PubMed record available.]
Woese CR et al. (1984)
Woese, C.R., Gupta, R., Hahn, C.M., Zillig, W., and Tu, J. "The phylogenetic relationships of three sulfur dependent archaebacteria." Syst. Appl. Microbiol. (1984) 5:97-105.
Woese CR et al. (1990)
Woese, C.R., Kandler, O., and Wheelis, M.L. "Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya." Proc. Natl. Acad. Sci. USA (1990) 87:4576-4579.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Crenarchaeota taxonomy/phylogenetic Encyclopedia of life
28 records from this provider organism-specific Integrated Microbial Genomes
Crenarchaeota taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Crenarchaeota taxonomy/phylogenetic Ocean Biogeographic Information System
ToL taxonomy/phylogenetic Tree of Life
Crenarchaeota taxonomy/phylogenetic TreeBase
Crenarchaeota taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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