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Taxonomy browser (Methylotuvimicrobium pelagicum)

Methylotuvimicrobium pelagicum 1)

Taxonomy ID: 39776 (for references in articles please use NCBI:txid39776)
current name
"Methylotuvimicrobium pelagicum" Orata et al. 2018, effective name 2) in [Orata FD et al. (2018)]
basionym:
Methylomonas pelagica Sieburth et al. 1988
type strain of Methylomonas pelagica: ACM:3505, NCIMB:2265, personal::AA-23
homotypic synonym:
Methylobacter pelagicus (Sieburth et al. 1988) Bowman et al. 1993
Methylomicrobium pelagicum (Sieburth et al. 1988) Bowman et al. 1995
includes:
unidentified proteobacterium U31652
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylotuvimicrobium
   Entrez records   
Database name Direct links Links from type
Nucleotide 6 1
Protein 1 -
PubMed Central 13 -
Identical Protein Groups 1 -
Taxonomy 1 -

Notes:

Comments and References:
Orata FD et al. (2018), doi: 10.3389/fmicb.2018.03162, PubMed: abstract
Orata, F.D., Meier-Kolthoff, J.P., Sauvageau, D., and Stein, L.Y. "Phylogenomic analysis of the gammaproteobacterial methanotrophs (order Methylococcales) calls for the reclassification of members at the genus and species levels." Front. Microbiol. (2018) 9:3162. [N.B.: the proposed combinations 'Methylotuvimicrobium japanense' and 'Methylotuvimicrobium pelagicum' are not included in Validation List No. 187. Consequently, they remain effectively but not validly published.]
U31652
The source organism in GenBank entry U31652 was incorrectly identified as Nitrosococcus oceanus NCIMB 11848; the true source of this sequence is unknown. Ian McDonald (personal communication).
Bowman JP et al. (1993b)
Bowman, J.P., Sly, L.I., Nichols, P.D., and Hayward, A.C. "Revised taxonomy of the methanotrophs: description of Methylobacter gen. nov., emendation of Methylococcus, validation of Methylosinus and Methylocystis species, and a proposal that the family Methylococcaceae includes only the group I methanotrophs." Int. J. Syst. Bacteriol. (1993) 43:735-753. [No PubMed record available.]
Bowman JP et al. (1995)
Bowman, J.P., Sly, L.I., and Stackebrandt, E. "The phylogenetic position of the family Methylococcaceae." Int. J. Syst. Bacteriol. (1995) 45:182-185.
Sieburth JM et al. (1987)
Sieburth, J.M., Johnson, P.W., Eberhardt, M.A., Sieracki, M.E., Lidstrom, M., and Laux, D. "The first methane-oxiding bacterium from the upper mixing layer of the deep ocean: Methylomonas pelagica sp. nov." Curr. Microbiol. (1987) 14:285-293.
VALIDATION LIST No. 24 (1988) (Methylomonas pelagica)
VALIDATION LIST No. 24. Int. J. Syst. Bacteriol. (1988) 38:136-137.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Methylomicrobium pelagicum (Sieburth et al. 1988) Bowman et al. 1995 taxonomy/phylogenetic Encyclopedia of life
Methylomicrobium pelagicum Sieburth, Johnson, Eberhardt, Sieracki, Lidstrom & Laux, 1987 taxonomy/phylogenetic Ocean Biogeographic Information System
Methylomicrobium pelagicum Sieburth, Johnson, Eberhardt, Sieracki, Lidstrom & Laux, 1987 taxonomy/phylogenetic World Register of Marine Species
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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