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Taxonomy browser (commelinids)

commelinids

Taxonomy ID: 4734 (for references in articles please use NCBI:txid4734)
current name
commelinids
NCBI BLAST name: monocots
Rank: clade
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Commelinidae
heterotypic synonym
Commeliniflorae
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 28,991,283 -
Protein 5,379,213 -
Structure 1,238 -
Genome 177 -
Popset 9,343 1,066
Conserved Domains 50 -
GEO Datasets 66,619 -
PubMed Central 173,314 129
Gene 1,569,012 -
HomoloGene 9,787 -
SRA Experiments 780,820 -
GEO Profiles 779,011 -
Protein Clusters 21,287 -
Identical Protein Groups 3,592,950 -
BioProject 44,303 -
BioSample 652,948 -
Assembly 980 -
PubChem BioAssay 4,066 -
Taxonomy 24,157 1

Comments and References:

APG IV (2016), doi:10.1111/boj.12385
The Angiosperm Phylogeny Group. 2016. An update of the Angiosperm Phylogeny Group classification of the orders and families of flowering plants: APG IV. Botanical Journal of the Linnean Society 181: 1-20.
APG III (2009), doi:10.1111/j.1095-8339.2009.00996.x
The Angiosperm Phylogeny Group. 2009. An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III. Botanical Journal of the Linnean Society 161(2): 105-121. The APG III system incorporates molecular data and phylogenetic methods and represents the most up-to-date classification of flowering plants.
Barrett CF et al. 2016
Barrett CF, Baker WJ, Comer JR, Conran JG, Lahmeyer SC, Leebens-Mack JH, Li J, Lim GS, Mayfield- Jones DR, Perez L, Medinz J, Pires JC, Santos C, Stevenson DW, Zomlefer WB, Davis JI. 2016. Plastid genomes reveal support for deep phylogenetic relationships and extensive rate variation among palms and other commelinid monocots. New Phytologist 209: 855-870. doi: 10.1111/nph.13617. Epub 2015 Sep 9.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
commelinids taxonomy/phylogenetic Lifemap
Commelinidae images MorphBank
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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