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Taxonomy browser (Phytophthora)

Phytophthora

Taxonomy ID: 4783 (for references in articles please use NCBI:txid4783)
current name
Phytophthora de Bary, 1876
includes:
Peronophythora
NCBI BLAST name: downy mildews
Rank: genus
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 898,128 -
Protein 1,960,148 -
Structure 46 -
Genome 63 1
Popset 1,593 781
Conserved Domains 6 4
GEO Datasets 725 -
PubMed Central 10,644 10,569
Gene 74,203 -
SRA Experiments 5,137 16
GEO Profiles 61,170 -
Identical Protein Groups 938,361 -
BioProject 439 9
BioSample 5,605 16
Assembly 260 -
PubChem BioAssay 351 -
Taxonomy 1,012 1

Comments and References:

Abad ZG et al. 2023, doi:10.3114/sim.2023.106.05
Abad, ZG, Burgess TI, Bourret, T, Bensch K, Cacciola SO, Scanu B, Mathew R, Kasiborski B, Srivastava S, Kageyama K, Bienapfl JC, Verkleij G, Broders K, Schena L, Redford AJ. 2023. Phytophthora: taxonomic and phylogenetic revision of the genus. Studies in Mycology
Riethmueller et al. (2002):
Riethmller, A., Voglmayr, H., Gker, M., Wei, M., Oberwinkler, F., 2002. Phylogenetic relationships of the downy mildews (Peronosporales) and related groups based on nuclear large subunit ribosomal DNA sequences. Mycologia 94, 834-849.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
DNA barcoding : Phytophthora taxonomy/phylogenetic Barcodes of Life
Phytophthora taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Phytophthora culture/stock collections Global Catalogue of Microorganisms
Phytophthora taxonomy/phylogenetic Index Fungorum
Phytophthora Bary, 1876 taxonomy/phylogenetic Integrated Taxonomic Information System
Phytophthora taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Phytophthora taxonomy/phylogenetic TreeBase
Phytophthora de Bary, 1876 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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