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Taxonomy browser (Trichoderma reesei)

Trichoderma reesei

Taxonomy ID: 51453 (for references in articles please use NCBI:txid51453)
current name
Trichoderma reesei E.G. Simmons, 1977 E.G. Simmons 1977
type material of Trichoderma reesei E.G. Simmons, 1977: CBS:383.78, CCM:F:560, DSM:768, IMI:192654, QM:6a, VKM:F:2047, VTT:D:74083
culture from type material of Trichoderma reesei E.G. Simmons, 1977: ATCC:13631, DAOM:167654
NCBI BLAST name: ascomycetes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic genbank synonym
Hypocrea jecorina
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; Trichoderma
   Entrez records   
Database name Subtree links Direct links
Nucleotide 65,654 56,118
Protein 28,847 661
Structure 144 114
Genome 1 1
Popset 88 88
GEO Datasets 514 499
PubMed Central 2,717 2,717
Gene 9,166 45
SRA Experiments 409 363
Identical Protein Groups 13,812 360
Bio Project 184 170
Bio Sample 483 433
Bio Systems 235 -
Assembly 6 2
Probe 17 17
PubChem BioAssay 4 4
Taxonomy 4 1

Comments and References:

Hypocrea jecorina
Kuhls K, Lieckfeldt E, Samuels GJ, Kovacs, Meyer W, Petrini O, Gams W, Borner T. and Kubicek CP. 1996. Molecular evidence that the asexual industrial fungus Trichoderma reesei is a clonal derivative of the ascomycete Hypocrea jecorina. Proc. Natl. Acad. Sci. U.S.A. 93 (15): 7755-7760.

Genome Information

Go to NCBI genomic BLAST page for Trichoderma reesei

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Hypocrea jecorina Berk. & Broome 1873 taxonomy/phylogenetic Encyclopedia of life
19 records from this provider organism-specific Genomes On Line Database
Hypocrea jecorina culture/stock collections Global Catalogue of Microorganisms
2 records from this provider taxonomy/phylogenetic Index Fungorum
2761201867: Trichoderma reesei RUT C-30 organism-specific Integrated Microbial Genomes
2 records from this provider taxonomy/phylogenetic MycoBank
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Trichoderma reesei taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
3 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
10-56 TD1 [1] AQG15 [1] AQGS28 [1] ATCC 13631= IMI 192654= DAOM 167654 [2]
ATCC 208851 [5 5 3] ATCC 24449 [4 3 2] ATCC 24449 (QM9123) and ATCC 26921 (QM9414) [1] ATCC 26921 [5 4 3]
ATCC 56765 [2 2] ATCC 56765 (RutC30) [1] ATCC 58353 [1] ATCC 66588 [1]
ATCC 66589 [2 2] Apex_TI19 [1] B1aA1EM2CC891 [1 1] BCC84469 [1]
BHR1P1F1M [1 1] BHR1P1F7S [1 1] BHR1P1FS [1 1] BHR2P1F1 [1 1]
BHR2P2F3 [1 2] BHR3P2F3S [1 2] BHR3P2F4S [1 2] BHR3P2F5S [1 1]
CBS 128355 [4 4 2] CBS 383.78 [6 5 3] CBS 383.78; QM6a [1 2] CBS 392.92 [2 2]
CBS 815.91 [1] CBS 816.91 and CBS 822.91 [1] CBS 822.91 [1 1] CBS 836.91 [4 3 2]
CBS 881.96 [3 3 2] CBS 999.97 [2 1] CBS368 [1 1] CBS999.97 [4 6]
CCRC32891 [1 1] CECT 2414 [2] CGF-11 [1] CHR3P2F1 [1 1]
CHR3P2F3 [1 1] CIB T118 [1] CIB T119 [1 1] CICC13052 [2 1 1]
CNFG_3204 [1] CT005 [1 1] CTCCSJ-A-SC32015 [1] CTR 72-94 [3 3 2]
DAOM 220784 [1] DAOM 220850 [3 3 2] DSM 768 [1 1] DT_3_3 [1]
EIM-30 [1] EMPA 688 [1] F17 [1] G.J.S 04-41 [3 5 2]
G.J.S 06-138 [5 5 4] G.J.S 06-140 [5 5 3] G.J.S 07-26 [1 5] G.J.S 85-229 [5 5 3]
G.J.S 85-230 [5 5 4] G.J.S 85-236 [5 5 3] G.J.S 85-238 [2 2 1] G.J.S 85-249 [5 5 3]
G.J.S 86-403 [3 3 2] G.J.S 86-404 [5 5 3] G.J.S 86-408 [2 2 1] G.J.S 86-410 [3 3 2]
G.J.S 88-6 [3 3 2] G.J.S 93-24 [5 5 4] G.J.S 95-123 [3 3 1] G.J.S 95-2081 [3 3 2]
G.J.S 95-2082 [3 3 2] G.J.S 95-82 [3 3 2] G.J.S 96-40I [3 3 2] G.J.S 97-177 [5 5 4]
G.J.S 97-178 [3 3 2] G.J.S. 06-138 [5 5 4] G.J.S. 06-140 [5 5 3] G.J.S. 85-229 [5 5 3]
G.J.S. 85-230 [5 5 4] G.J.S. 85-236 [5 5 3] G.J.S. 85-249 [5 5 3] G.J.S. 86-404 [5 5 3]
G.J.S. 93-24 [5 5 4] G.J.S. 96-401 [2 2 2] G.J.S. 97-177 [5 5 4] G39 [1 1]
GB1 [1] GB11 [1] GB16 [1] GB17 [1]
GB18 [1] GB24 [1] GB27 [1] GB5 [1]
GJS 00-09 [4 4 4] GJS 00-89 [4 4 4] GJS 04-115 [4 4 4] GJS 09-74 [4 4 4]
GJS 10-189 [4 4 4] GJS 85-249 [1] GJS 93-19 [1] GJS 93-22 [1]
GJS 93-23 [1] GJS 93-24 [1] GJS 97-177 [1] GJS 97-178 [1]
GJS 97-38 [5 4 4] GTXKohli-1 [1 1] GTXKohli-12 [1 1] GXNN4056 [2 1]
I32 [2] IMI 113135 = NBT 6 [1 1] IMI 289235 [1] IPBCC 06.325 [1]
IPBCC 07.556 [1] IPBCC 93.260 [1] IPBCC06_325 [1 1] IPBCC07_556 [1 1]
IPBCC93_260 [1 1] JCM 22676 [2] KACC40517 [1] KCTC1285 [1]
KCTC1286 [1] KCTC6045 [1] L1 [1] M1 [1 1]
M5 [2 2] MMCC 1446.2 [1 1] MMCC 1447.2 [1 1] MMCC 1484.2 [1 1]
MPE6 [1] N-44 [1 1] NBRC 31329 [1 1] NCIM 1186 [1 1]
NCIM 992 [1 1] NRRL 66059 [1 1] PANM2030-1-EM1 [1] PC-1-4 [1]
PC-3-7 [1 2] PDR-22 [1] POS9 [1 1] PTCC 5142 [1 1]
QM 6a [6 1 2] QM 6a genome [1 1 1] QM 9414 [10 1 7] QM6a [9301 35827 2 18272 7]
QM6a=ATCC13631 [1 1] QM9414 [58 7090 46 5] QM9414 (ATCC26921) [7068] QM9414 (VTT-D-74075) [1 1]
RHa [1 1] RKD06 [1] Rut C-30 [180 9851] Rut C30 [4 2 4 1]
Rut-C30 [4 2 4 1] RutC-30 [20 2047 1 19 1] RutC30 [2 2] S2584 [1]
S2606 [1] S3 [3 2] S3-S-2-6 [1 1] S3-S-2-7 [1 1]
S4-P-2-3 [1 1] S4-S-2-5 [1 1] SC46a [1 1] SJVTR [4 3]
SN_14 [1 1] SP02PU [1] SU-19 [1 1] SU-1b [1 1]
SWFC8695 [1] SWFC8707 [1] SWFC8709 [1] SWFC8727 [1]
SWFC8732 [1] SWFC8922 [1] T10 [1 1] T11a [1 1]
T11b [1 1] T11c [1 1] T29 [3] TAMA 153 [1]
TCBG-04 [1 1] TS206 [1 1 1] TS207 [1 1 1] TUB F-1034 [1 5]
TUB F-1038 [1 5] TUB F-1066 [3 5] TUB F-363 [1 1] TUB F-430 [1 5]
TUB F-728 [3 3 1] TUB F-733 [5 7 2] TUB F-833 [1 1] TUCIM1282 [1 1 1]
TUCIM283 [1 1 1] TUCIM665 [1 1 1] TUCIM938 [1 1 1] Tr(CSAU) [1]
Tr/CSAU [1] VPS3 [1] VTT-D-79125 [5 4] VTT-D-8013 [1]
VTT-D-80133 [4 8] VTT-D80133 [3] X31 [1] Zhong7-1 [1]
mms510 [1] xsd08124 [1 1]
isolate
1 [1] 2 [1] 3967 [1] 5A14 [1 1]
6 [1] A1S3-D22 [1 1] AB1 [3] AB2 [1]
B1A0901APD2CC409 [1] B1a0901bPD2CC65 [1] BDF-TR [1 1] C40271aP301CC33 [1 1]
CBS 999.97 [2 1 2] CPK1407 [1 1 1] CPK158 [1 1 1] CPK170 [1 1 1]
CPTrZC-04 [2 1] CPTrZC-14 [1] CPTrZC-15 [1] CTCCSJ-ASD50040 [1]
CTCCSJ-W-HB20410 contains [1 1] Cbi3.3.1 [1] F07-01 [1 1] F46-01 [1 1]
F48-01 [1 1] F48-03 [1 1] GITXKohli-1 [1 1] GITXKohli-2 [1 1]
HT6 [1] HT7 [1] Hyd5 [1 1] IABT1003 [1 1]
ITCC-7284 [1] L9 [1] M10 [1 1] M20112P30CC1147 [1]
M20312EM2CC1162 [1 1] MT04 [1] NL1_SEQ93-Sample2 [1 1] NL4_SEQ93-Sample2 [1 1]
PG14 [1] Pn-15E [1] QM6a [2 2] RSPG_24 [1]
RUT C-30 [1 1] S254 [1 1] ST013 [1 1] SVPUAT-Trees-01 [1 1]
SVPUAT-Trees-04 [1 1] Sponge Associated Fungi [1] T-KN8 [2] TCT10 [1]
TR24RS [1 1] TR3 [4 3] TRF560 [1 1] TUB F-1034 [1]
TV217 [1 1] TV218 [1 1] TV219 [1 1] TV221 [1 1]
Tr-01 [2 2] Tr-02 [2 2] UASWS1170 [1 1] UZ455_16 [1]
WT2 [1] c1c2 [1] mutant1 [1 1] mutant2 [1 1]
nb1 [1] soil [1]
specimen-voucher
DAOM 2320480.1 [1] HR2414-89 [1 1] HR241489.1 [1] IDEA_FITOPAT_CT005 [1 1]
JUF0026 [1] JUF0027 [1] MDl1 [1 1]
anamorph
Trichoderma reesei [6 2]


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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