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Taxonomy browser (Fusarium oxysporum)

Fusarium oxysporum

Taxonomy ID: 5507 (for references in articles please use NCBI:txid5507)
current name
Fusarium oxysporum Schltdl., 1824
epitype of Fusarium oxysporum: CBS:H-23620
culture from epitype of Fusarium oxysporum: CBS:144134
includes:
Fusarium sp. Fox56
Fusarium sp. Fox59
Fusarium sp. GIFUUTR5
Fusarium sp. PDBC NPFu1
Fusarium sp. PDBC NPFu2
Fusarium sp. PDBC NPFu3
Trichoderma sp. CDR2P2F1
fungal sp. ZZF51
NCBI BLAST name: ascomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Lineage( abbreviated )
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 129,800 37,214 5
Protein 1,103,811 361,909 -
Structure 78 72 -
Genome 1 1 -
Popset 1,646 1,374 -
GEO Datasets 198 105 -
PubMed Central 12,093 12,084 -
Gene 43,848 43 -
SRA Experiments 2,162 1,095 -
Identical Protein Groups 484,335 199,144 -
BioProject 337 183 -
BioSample 2,134 1,159 -
Assembly 773 424 -
PubChem BioAssay 498 414 -
Taxonomy 147 1 -

Comments and References:

image:Fusarium oxysporum
Lombard et al. (2018), doi:10.3767/persoonia.2019.43.01
Lombard L. et al. 2018. Epitypification of Fusarium oxysporum - clearing the taxonomic chaos. Persoonia 43:1-47.

Genome Information

Go to NCBI genomic BLAST page for Fusarium oxysporum

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
6 records from this provider organism-specific Genomes On Line Database
Fusarium oxysporum culture/stock collections Global Catalogue of Microorganisms
2 records from this provider taxonomy/phylogenetic Index Fungorum
Fusarium oxysporum Schlechtendal taxonomy/phylogenetic MycoBank
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Fusarium oxysporum Schltdl., 1824 taxonomy/phylogenetic Ocean Biogeographic Information System
Fusarium oxysporum taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Fusarium oxysporum taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
Fusarium oxysporum Schltdl., 1824 taxonomy/phylogenetic World Register of Marine Species
10 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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