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Taxonomy browser (Phytophthora sojae)

Phytophthora sojae

Taxonomy ID: 67593 (for references in articles please use NCBI:txid67593)
current name
Phytophthora sojae Kaufm. & Gerd., 1958
epitype of Phytophthora sojae: CBS:H-25079
culture from epitype of Phytophthora sojae: CBS:149406, NRRL:64266, WPC:P3114
includes:
Phytophthora megasperma f. sp. glycinea
NCBI BLAST name: downy mildews
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae; Phytophthora
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 58,997 58,997 17
Protein 54,532 54,503 -
Structure 14 8 -
Genome 1 1 -
Popset 74 74 -
GEO Datasets 369 348 -
PubMed Central 1,770 1,770 -
Gene 28,217 28,217 -
SRA Experiments 352 332 -
GEO Profiles 61,170 61,170 -
Identical Protein Groups 26,172 26,170 -
BioProject 51 49 -
BioSample 385 365 -
Assembly 11 11 -
PubChem BioAssay 47 47 -
Taxonomy 2 1 -

Genome Information

Go to NCBI genomic BLAST page for Phytophthora sojae

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Phytophthora sojae Kaufm. & Gerd. 1958 taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Phytophthora sojae culture/stock collections Global Catalogue of Microorganisms
Phytophthora sojae Kaufm. & Gerd. 1958 taxonomy/phylogenetic Index Fungorum
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Phytophthora sojae taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
2 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
2457 [1 12 1] 2858 [1 12 1] 30 [1] 312; ATCC 48068 [2 2 1]
3444 [1 12 1] 7076 [2] A2-2 [1] ACR12 [1 1]
ATCC 18010 [1] ATCC 48068 [3 3 2] ATCC MYA-3899 [1 1] BR1074 [1 1 1]
BR1075 [2 2 1] BR1076 [1 1 1] BR1077 [1 1 1] BR1078 [1 1 1]
BR1079 [1 1 1] BR1080 [1 1 1] BR1081 [1 1 1] BR1801 [1 1 1]
BR556 [1 1 1] BR557 [1 1 1] BR582 [1 1 1] CBS 125704 [1 1 1]
CN1 [1] CPHST BL 180 [6 6 4] CPHST BL 56G [5 5 4] CPHST BL 56G = P3114 WPC [1 1 1]
CPHST-BL 180 [6 6 4] Fu-P12-1 [3 2 2] Fu-P2 [3 2 2] HY11 [1 1]
HY15 [1 1] HY17 [1 1] IFO31016 [3 2 2] KACC 40412 [1 12]
KACC 40468 [1 12] KACC 48988 [1 12] KACC 48989 [1 12] MG 25-5 [2 2]
MG 34-4 [3 3 3] NJAU1062 [1 1] P0405 [2 1] P10406 [1 1]
P10407 [1 1] P10408 [1 1] P10704 [2] P1754 [1]
P3114 [3] P3114 WPC [3 3 3] P3248 WPC (G. Abad selected specimen 1) [1 1 1] P6479 [1 1]
P6497 [14 229 110 21 28749 2 53126 165 6] P6497 (race 2) [2 2] P6497, Race 2 [1 15 22] P6954 [13 1 1]
P7061 [2] P7063 [1] P7063 (race 6) [1 1] P7064 [322 1 328]
P7074 [326 1 327] P7074 (race17) [1 1] P7076 [2 333 333 5] P7081 [1]
P7358 [1] P7369 [1 1] P7428 [1 1] PS-K1 [1 12 1]
PS001 [3 3 3] PS002 [3 3 3] PS003 [3 3 3] PS004 [3 3 3]
PS005 [3 3 3] PS006 [3 3 3] PS007 [3 3 3] PS008 [3 3 3]
PS009 [3 3 3] PS010 [3 3 3] PS0718 [1] Pds13 [1]
Pmg-2 [1 105] Race 2 [3 3] Race11 [1 1] Race30 [1]
S317 [1] SCRP555 [29 5 6] SE CPHST BL 180 [1 1 1] SOY324 [1]
SX28 [1] TH13 [1] UQ1200 [1 1] UQ310 [1 1]
race 1 [1 1] race 2, strain P6497 [2 1982] yu1-2 [1]
type
race 2 [1 7]
isolate
04_1 [1 1] 04_2 [1 1] 06_1 [1 1] 06_2 [1 1]
11_1 [1 1] 11_2 [1 1] 16PR009.1 [1] 16PR009.2 [1]
16PR027C.1 [1] 16PR027C.2 [1] 17PR009A.1 [1] 17PR009A.2 [1]
17PR013G.3 [1] 17PR018F.2 [1] 17PR018J.3 [1] 22D8 [9 2 7]
28F9 [8 1 6] 312 [1 1 1] 5057301 [1] 5057302 [1]
5057303 [1] 5057305 [1] 5057306 [1] 5057307 [1]
5057308 [1] 9933R15 [1] ACR8 [1 1 1] ACR9 [1 1 1]
AD2713 [1 1] AD2858 [1 1] AD3035 [1] AD32131 [1]
AD3617 [1] AD3850 [1] AD4379 [1] AGSV1 [1]
BB8 [1] BRIP 40435a [1] BZ1 [1] BZ9 [1]
C-ARSO2_1-13 [1 1] C-ARSO2_2-1 [1 1] C-ARSO2_2-10 [1 1] C-ARSO2_6-6 [1 1]
C-KSSO2_3-11 [1 1] C-MISO2_3-1 [1 1] C-MISO2_3-12 [1 1] C-MISO2_3-13 [1 1]
C-MISO2_3-15 [1 1] C-MISO2_3-17 [1 1] C-MISO2_3-3 [1 1] C-MISO2_3-4 [1 1]
C-MISO2_6-11 [1 1] C-MISO2_6-3 [1 1] C-MNSO2_3-18 [1 1] C-MNSO2_3-22 [1 1]
C-SDSO2_2-16 [1 1] CBS 382.61 [1 1] DG39682 [1] F14 [1 1]
FY8 [1] Fuk 12-2 [1] Fuk12-2 [2 1] GJ2853 [1 1]
GJ3053 [1] GJ3229 [1] GJ3385 [1] GJ3541 [1]
HP50092 [1] Hok 13-1 [2] Hok13-1 [1 1] IASO_3-21_1 [1 1]
IASO_3-41.17 [2 2 1] IASO_8-13.10rt [1 1] ILB 326 [1 1] IS3241 [1]
KACC40412 [1] MAFF305924 [1] MISO_4-27 [1 1] MISO_4-27_1 [1 1]
MNSO_5-17.2r [1 1] MSU 72 [1] MSU 75 [1] MSU 76 [1]
MSU 83 [1] MSU 84 [1] MSU 85 [1] MSU 86 [1]
MSU 88 [1] MY2457 [1 1] NESO_2-25 [1 1] ONSO2_1-10 [1 1]
ONSO2_1-11 [1 1] ONSO2_1-111 [1 1] ONSO2_1-112 [1 1] ONSO2_1-12 [1 1]
ONSO2_1-22 [1 1] ONSO2_1-23 [1 1] ONSO2_1-24 [1 1] ONSO2_1-25 [1 1]
ONSO2_1-26 [1 1] ONSO2_1-27 [1 1] ONSO2_1-28 [1 1] ONSO2_1-29 [1 1]
ONSO2_1-30 [1 1] ONSO2_1-32 [1 1] ONSO2_1-33 [1 1] ONSO2_1-34 [1 1]
ONSO2_1-36 [1 1] ONSO2_1-37 [1 1] ONSO2_1-38 [1 1] ONSO2_1-39 [1 1]
ONSO2_1-40 [1 1] ONSO2_1-41 [1 1] ONSO2_1-43 [1 1] ONSO2_1-44 [1 1]
ONSO2_1-45 [1 1] ONSO2_1-46 [1 1] ONSO2_1-47 [1 1] ONSO2_1-48 [1 1]
ONSO2_1-55 [1 1] ONSO2_1-56 [1 1] ONSO2_1-57 [1 1] ONSO2_1-59 [1 1]
ONSO2_1-60 [1 1] ONSO2_1-61 [1 1] ONSO2_1-62 [1 1] ONSO2_1-63 [1 1]
ONSO2_1-64 [1 1] ONSO2_1-65 [1 1] ONSO2_1-66 [1 1] ONSO2_1-67 [1 1]
ONSO2_1-69 [1 1] ONSO2_1-7 [1 1] ONSO2_1-70 [1 1] ONSO2_1-71 [1 1]
ONSO2_1-8 [1 1] ONSO2_1-83 [1 1] ONSO2_1-84 [1 1] ONSO2_1-95 [1 1]
ONSO2_1-96 [1 1] ONSO2_1-98 [1 1] ONSO2_1-99 [1 1] P0405 [2 4]
P10704 [2 4] P3114 [6 2 7] P3114 WPC [1 1 1] P6497 [19 7 115]
P6954 [1 1] P7061 [2 4] P7064 [4 1 5] P7074 [1 1]
P7076 [2 1 1] P7081 [1 1] PD_00124(P3114) [7 7 6] PG10 [1]
PGD1 [1] PHKU1 [2 1] Pm-1 [12 9] Ps0301 [1 1 1]
Ps0302 [1 1 1] Ps0702 [1 1 1] Ps0705 [1 1 1] Ps0903 [1 1 1]
Ps0910 [1 1] R1 [3 1 1] R1.1-23 [1] R25 [1]
R4 [2 1 1] R5 [1 1 1] R7 [1] S317 [1 1]
SCRP462 [1 1 1] SDSO_6-23 [1 1] SDSO_7-35 [1 1] SDSO_9-72 [1 1]
SDSO_9-79 [1 1] SDSO_9-80 [1 1] SJ3613 [1] SW3444 [1 1]
SZ2 [1] TF315 [1 1] TosB3 [4 2] TosB5 [2 1]
UQ1200 [6 6] UQ7319 [1] V-MISO2_2-44 [1 1] V-MISO2_3-44 [1 1]
V-MISO2_3-46 [1 1] V-MISO2_3-47 [1 1] V-MISO2_3-53 [1 1] V-MISO2_3-57 [1 1]
V-MISO2_3-63 [1 1] V-MISO2_3-66 [1 1] V-MNSO2_1-47 [1 1] V-MNSO2_1-62 [1 1]
V-MNSO2_3-43 [1 1] V-NDSO2_2-52 [1 1] V-NDSO2_4-43 [1 1] V-NESO2_2-44 [1 1]
V-NESO2_2-49 [1 1] V-NESO2_6-42 [1 1] V-NESO2_6-55 [1 1] V-NESO2_6-58 [1 1]
V-SDSO2_1-53 [1 1] V-SDSO2_1-75 [1 1] V-SDSO2_2-48 [1 1] V-SDSO2_2-58 [1 1]
V-SDSO2_2-75 [1 1] V-SDSO2_4-71 [1 1] V-SDSO2_5-43 [1 1] V-SDSO2_6-61 [1 1]
V-SDSO2_6-74 [1 1] WJ3352 [1] WJ3624 [1] WPC P7358 [3 3]
WPC0405C12 [1] WPC10704A118 [1] WPC3114A192 [1] WPC6497A1146 [1]
WPC7061A1217 [1] pg1 [1] pg2 [1] pg3 [1]
phyto16 [1 1] race 1 [4 4] sojae-P7358 [1]
nat-host
Glycine max [182] soybean [55]
specimen-voucher
10 [1 1 1] AH7 [1 1 1] BR1079 [2 1] BR582 [2 1]
CBS38261 [2 1] CBS:382.61 [2 2 2] FJ47 [1 1 1] P0405 [2 1]
P10704 [2 1] P3114 [2 1] P6497 [2 1] P7061 [2 1]
PS001 [1 1] PS002 [1 1] PS003 [1 1] PS004 [1 1]
PS005 [1 1] PS006 [1 1] PS007 [1 1] PS008 [1 1]
PS009 [1 1] PS010 [1 1] SC10 [1 1 1]
culture-collection
ATCC:18010 [1] ATCC:MYA-3899 [1 1] CBS:125704 [1 1 1] CCFC:DAOM BR 1074 [2 2 2]
CCFC:DAOM BR 1079 [2 2 2] CCFC:DAOM BR 1081 [2 2 2] CCFC:DAOM BR 198 [2 2 2] CCFC:DAOM BR 556 [2 2 2]
MAFF:305924 [1] WPC:0405C12 [1 1] WPC:10406D1548 [1 1] WPC:10407D1528 [1 1]
WPC:10408D1539 [1 1] WPC:6497A1146 [1 1] WPC:7369D1549 [1 1] WPC:7428D1557 [1 1]
WPC:A1146 [2 4] WPC:A118 [2 4] WPC:A1217 [2 4] WPC:A192 [4 6]
WPC:C12 [2 4] WPC:P7358 [3 3]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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